RNA–Protein interactions for RNA: ENST00000547872.1

CBX5-203, Transcript of chromobox 5, humanhuman

TSL 2

Gene CBX5, Length 745 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-203ENST00000547872 SH3RF3Q8TEJ3 882 aaPredicted RBP5.14□□□□□ -1.59
CBX5-203ENST00000547872 TIFAQ96CG3 184 aa5.14□□□□□ -1.59
CBX5-203ENST00000547872 HOOK2Q96ED9 719 aa5.14□□□□□ -1.59
CBX5-203ENST00000547872 TYW1Q9NV66 732 aaKnown RBP5.14□□□□□ -1.59
CBX5-203ENST00000547872 AURKAIP1Q9NWT8 199 aaPredicted RBP5.14□□□□□ -1.59
CBX5-203ENST00000547872 TRPS1Q9UHF7 1281 aa5.14□□□□□ -1.59
CBX5-203ENST00000547872 MYH13Q9UKX3 1938 aa5.14□□□□□ -1.59
CBX5-203ENST00000547872 TNKSO95271 1327 aa5.14□□□□□ -1.59
CBX5-203ENST00000547872 CDH23Q9H251 3354 aa5.14□□□□□ -1.59
CBX5-203ENST00000547872 PTPRFP10586 1907 aa5.13□□□□□ -1.59
CBX5-203ENST00000547872 PI4KAP2A4QPH2 592 aa5.13□□□□□ -1.59
CBX5-203ENST00000547872 GOLGA6L6A8MZA4 724 aa5.13□□□□□ -1.59
CBX5-203ENST00000547872 PRR5-ARHGAP8B1AHC4 643 aa5.13□□□□□ -1.59
CBX5-203ENST00000547872 C1QTNF3-AMACRE9PGA6 284 aa5.13□□□□□ -1.59
CBX5-203ENST00000547872 ADCY6O43306 1168 aa5.13□□□□□ -1.59
CBX5-203ENST00000547872 PCDHGA12O60330 932 aa5.13□□□□□ -1.59
CBX5-203ENST00000547872 PQBP1O60828 265 aaKnown RBP5.13□□□□□ -1.59
CBX5-203ENST00000547872 INSRRP14616 1297 aa5.13□□□□□ -1.59
CBX5-203ENST00000547872 HMGCS2P54868 508 aa5.13□□□□□ -1.59
CBX5-203ENST00000547872 PPP3CAQ08209 521 aa5.13□□□□□ -1.59
CBX5-203ENST00000547872 LMOD3Q0VAK6 560 aa5.13□□□□□ -1.59
CBX5-203ENST00000547872 MGAT2Q10469 447 aa5.13□□□□□ -1.59
CBX5-203ENST00000547872 IFIT5Q13325 482 aaKnown RBP5.13□□□□□ -1.59
CBX5-203ENST00000547872 NRN1LQ496H8 165 aa5.13□□□□□ -1.59
CBX5-203ENST00000547872 USP39Q53GS9 565 aaKnown RBP5.13□□□□□ -1.59
CBX5-203ENST00000547872 PRAMEF14Q5SWL7 426 aa5.13□□□□□ -1.59
CBX5-203ENST00000547872 FASTKD5Q7L8L6 764 aaKnown RBP5.13□□□□□ -1.59
CBX5-203ENST00000547872 ZBTB46Q86UZ6 589 aa5.13□□□□□ -1.59
CBX5-203ENST00000547872 ZFPM1Q8IX07 1006 aa5.13□□□□□ -1.59
CBX5-203ENST00000547872 SCYL3Q8IZE3 742 aa5.13□□□□□ -1.59
CBX5-203ENST00000547872 PQLC1Q8N2U9 271 aa5.13□□□□□ -1.59
CBX5-203ENST00000547872 LILRA3Q8N6C8 439 aaPredicted RBP5.13□□□□□ -1.59
CBX5-203ENST00000547872 PI4KAP1Q8N8J0 262 aa5.13□□□□□ -1.59
CBX5-203ENST00000547872 NRG4Q8WWG1 115 aa5.13□□□□□ -1.59
CBX5-203ENST00000547872 PGBD4Q96DM1 585 aa5.13□□□□□ -1.59
CBX5-203ENST00000547872 TEKT5Q96M29 485 aa5.13□□□□□ -1.59
CBX5-203ENST00000547872 PDCD2LQ9BRP1 358 aa5.13□□□□□ -1.59
CBX5-203ENST00000547872 GPR87Q9BY21 358 aa5.13□□□□□ -1.59
CBX5-203ENST00000547872 SLC13A1Q9BZW2 595 aa5.13□□□□□ -1.59
CBX5-203ENST00000547872 LANCL2Q9NS86 450 aa5.13□□□□□ -1.59
CBX5-203ENST00000547872 PCDHGA9Q9Y5G4 932 aaKnown RBP5.13□□□□□ -1.59
CBX5-203ENST00000547872 PCDHGA8Q9Y5G5 932 aa5.13□□□□□ -1.59
CBX5-203ENST00000547872 PCDHGA7Q9Y5G6 932 aa5.13□□□□□ -1.59
CBX5-203ENST00000547872 PCDHGA6Q9Y5G7 932 aa5.13□□□□□ -1.59
CBX5-203ENST00000547872 PCDHGA3Q9Y5H0 932 aa5.13□□□□□ -1.59
CBX5-203ENST00000547872 LRRFIP2Q9Y608 721 aaKnown RBP5.13□□□□□ -1.59
CBX5-203ENST00000547872 ATAD5Q96QE3 1844 aa5.13□□□□□ -1.59
CBX5-203ENST00000547872 PLXNA1Q9UIW2 1896 aa5.13□□□□□ -1.59
CBX5-203ENST00000547872 LOC285556D6RIA3 1793 aa5.12□□□□□ -1.59
CBX5-203ENST00000547872 B5MCH6 92 aa5.12□□□□□ -1.59
CBX5-203ENST00000547872 SNUPNO95149 360 aaKnown RBP5.12□□□□□ -1.59
CBX5-203ENST00000547872 HK1P19367 917 aa5.12□□□□□ -1.59
CBX5-203ENST00000547872 C5AR1P21730 350 aa5.12□□□□□ -1.59
CBX5-203ENST00000547872 TMPOP42166 694 aaKnown RBP5.12□□□□□ -1.59
CBX5-203ENST00000547872 IRX3P78415 501 aaPredicted RBP5.12□□□□□ -1.59
CBX5-203ENST00000547872 RRP1BQ14684 758 aaKnown RBP5.12□□□□□ -1.59
CBX5-203ENST00000547872 FAM110CQ1W6H9 321 aa5.12□□□□□ -1.59
CBX5-203ENST00000547872 DCAF17Q5H9S7 520 aaPredicted RBP5.12□□□□□ -1.59
CBX5-203ENST00000547872 LDHAL6AQ6ZMR3 332 aa5.12□□□□□ -1.59
CBX5-203ENST00000547872 Q6ZRM9 215 aa5.12□□□□□ -1.59
CBX5-203ENST00000547872 Q6ZVL8 140 aa5.12□□□□□ -1.59
CBX5-203ENST00000547872 DOK3Q7L591 496 aa5.12□□□□□ -1.59
CBX5-203ENST00000547872 XYLT1Q86Y38 959 aa5.12□□□□□ -1.59
CBX5-203ENST00000547872 C1orf210Q8IVY1 113 aa5.12□□□□□ -1.59
CBX5-203ENST00000547872 TRMT2AQ8IZ69 625 aaKnown RBP5.12□□□□□ -1.59
CBX5-203ENST00000547872 REPS2Q8NFH8 660 aa5.12□□□□□ -1.59
CBX5-203ENST00000547872 C7orf25Q9BPX7 421 aa5.12□□□□□ -1.59
CBX5-203ENST00000547872 MANSC1Q9H8J5 431 aa5.12□□□□□ -1.59
CBX5-203ENST00000547872 CERS4Q9HA82 394 aa5.12□□□□□ -1.59
CBX5-203ENST00000547872 TMEM140Q9NV12 185 aa5.12□□□□□ -1.59
CBX5-203ENST00000547872 DDX56Q9NY93 547 aaKnown RBP5.12□□□□□ -1.59
CBX5-203ENST00000547872 TUBD1Q9UJT1 453 aa5.12□□□□□ -1.59
CBX5-203ENST00000547872 INTUQ9ULD6 942 aa5.12□□□□□ -1.59
CBX5-203ENST00000547872 AGTPBP1Q9UPW5 1226 aa5.12□□□□□ -1.59
CBX5-203ENST00000547872 CLCA2Q9UQC9 943 aa5.12□□□□□ -1.59
CBX5-203ENST00000547872 MYRFQ9Y2G1 1151 aa5.12□□□□□ -1.59
CBX5-203ENST00000547872 GBF1Q92538 1859 aa5.11□□□□□ -1.59
CBX5-203ENST00000547872 KRTAP23-1A1A580 65 aa5.11□□□□□ -1.59
CBX5-203ENST00000547872 TRIM43BA6NCK2 446 aa5.11□□□□□ -1.59
CBX5-203ENST00000547872 KBTBD13C9JR72 458 aa5.11□□□□□ -1.59
CBX5-203ENST00000547872 CXCL11O14625 94 aa5.11□□□□□ -1.59
CBX5-203ENST00000547872 ITGB8P26012 769 aa5.11□□□□□ -1.59
CBX5-203ENST00000547872 CYP2C19P33261 490 aa5.11□□□□□ -1.59
CBX5-203ENST00000547872 SREBF1P36956 1147 aa5.11□□□□□ -1.59
CBX5-203ENST00000547872 RECQLP46063 649 aaPredicted RBP5.11□□□□□ -1.59
CBX5-203ENST00000547872 SCNN1GP51170 649 aa5.11□□□□□ -1.59
CBX5-203ENST00000547872 NEK2P51955 445 aa5.11□□□□□ -1.59
CBX5-203ENST00000547872 FKBP1AP62942 108 aaKnown RBP5.11□□□□□ -1.59
CBX5-203ENST00000547872 PTH1RQ03431 593 aa5.11□□□□□ -1.59
CBX5-203ENST00000547872 PUM1Q14671 1186 aaKnown RBP eCLIP5.11□□□□□ -1.59
CBX5-203ENST00000547872 ZXDCQ2QGD7 858 aaPredicted RBP5.11□□□□□ -1.59
CBX5-203ENST00000547872 APOBEC3HQ6NTF7 200 aaKnown RBP5.11□□□□□ -1.59
CBX5-203ENST00000547872 RNF207Q6ZRF8 634 aa5.11□□□□□ -1.59
CBX5-203ENST00000547872 SPRED1Q7Z699 444 aa5.11□□□□□ -1.59
CBX5-203ENST00000547872 FBXO18Q8NFZ0 1043 aa5.11□□□□□ -1.59
CBX5-203ENST00000547872 ANKS1AQ92625 1134 aa5.11□□□□□ -1.59
CBX5-203ENST00000547872 HOXB13Q92826 284 aaPredicted RBP5.11□□□□□ -1.59
CBX5-203ENST00000547872 EXTL1Q92935 676 aa5.11□□□□□ -1.59
CBX5-203ENST00000547872 TRIM43Q96BQ3 446 aaPredicted RBP5.11□□□□□ -1.59
CBX5-203ENST00000547872 CHMP4CQ96CF2 233 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms