RNA–Protein interactions for RNA: ENST00000546211.5

SKP2-208, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5 BASIC

Gene SKP2, Length 1,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-208ENST00000546211 TTC3P53804 2025 aa20.51■□□□□ 0.87
SKP2-208ENST00000546211 RPL7AP62424 266 aaKnown RBP20.51■□□□□ 0.87
SKP2-208ENST00000546211 PLCB3Q01970 1234 aa20.51■□□□□ 0.87
SKP2-208ENST00000546211 YWHAHQ04917 246 aaPredicted RBP20.51■□□□□ 0.87
SKP2-208ENST00000546211 OR6B2Q6IFH4 312 aa20.51■□□□□ 0.87
SKP2-208ENST00000546211 MFSD5Q6N075 450 aa20.51■□□□□ 0.87
SKP2-208ENST00000546211 TMEM175Q9BSA9 504 aa20.51■□□□□ 0.87
SKP2-208ENST00000546211 DUSP16Q9BY84 665 aa20.51■□□□□ 0.87
SKP2-208ENST00000546211 CYLDQ9NQC7 956 aa20.51■□□□□ 0.87
SKP2-208ENST00000546211 FAN1Q9Y2M0 1017 aa20.51■□□□□ 0.87
SKP2-208ENST00000546211 TULP2O00295 520 aa20.5■□□□□ 0.87
SKP2-208ENST00000546211 EFCAB14O75071 495 aa20.5■□□□□ 0.87
SKP2-208ENST00000546211 CSF2RAP15509 400 aa20.5■□□□□ 0.87
SKP2-208ENST00000546211 ITGB8P26012 769 aa20.5■□□□□ 0.87
SKP2-208ENST00000546211 CTNNA2P26232 953 aa20.5■□□□□ 0.87
SKP2-208ENST00000546211 MAN1A1P33908 653 aa20.5■□□□□ 0.87
SKP2-208ENST00000546211 CTNNA1P35221 906 aaKnown RBP20.5■□□□□ 0.87
SKP2-208ENST00000546211 ACADSBP45954 432 aa20.5■□□□□ 0.87
SKP2-208ENST00000546211 TUBB4BP68371 445 aa20.5■□□□□ 0.87
SKP2-208ENST00000546211 INTS6LQ5JSJ4 861 aaKnown RBP20.5■□□□□ 0.87
SKP2-208ENST00000546211 FAM102AQ5T9C2 384 aaPredicted RBP20.5■□□□□ 0.87
SKP2-208ENST00000546211 TMEM110Q86TL2 294 aa20.5■□□□□ 0.87
SKP2-208ENST00000546211 MYCBPAPQ8TBZ2 947 aa20.5■□□□□ 0.87
SKP2-208ENST00000546211 UBXN4Q92575 508 aa20.5■□□□□ 0.87
SKP2-208ENST00000546211 CD101Q93033 1021 aa20.5■□□□□ 0.87
SKP2-208ENST00000546211 VWCEQ96DN2 955 aa20.5■□□□□ 0.87
SKP2-208ENST00000546211 RTP3Q9BQQ7 232 aa20.5■□□□□ 0.87
SKP2-208ENST00000546211 METTL5Q9NRN9 209 aaKnown RBP20.5■□□□□ 0.87
SKP2-208ENST00000546211 ADAM28Q9UKQ2 775 aa20.5■□□□□ 0.87
SKP2-208ENST00000546211 TSC2P49815 1807 aa20.5■□□□□ 0.87
SKP2-208ENST00000546211 MICAL3Q7RTP6 2002 aa20.49■□□□□ 0.87
SKP2-208ENST00000546211 MYBPHLA2RUH7 354 aa20.49■□□□□ 0.87
SKP2-208ENST00000546211 CLDN5O00501 218 aa20.49■□□□□ 0.87
SKP2-208ENST00000546211 XPO1O14980 1071 aaKnown RBP20.49■□□□□ 0.87
SKP2-208ENST00000546211 CEP104O60308 925 aa20.49■□□□□ 0.87
SKP2-208ENST00000546211 AMHP03971 560 aa20.49■□□□□ 0.87
SKP2-208ENST00000546211 FAM200BP0CF97 657 aa20.49■□□□□ 0.87
SKP2-208ENST00000546211 NPR3P17342 541 aa20.49■□□□□ 0.87
SKP2-208ENST00000546211 PLA2G4AP47712 749 aa20.49■□□□□ 0.87
SKP2-208ENST00000546211 TSPY1Q01534 308 aa20.49■□□□□ 0.87
SKP2-208ENST00000546211 FAM183BPQ6ZVS7 135 aa20.49■□□□□ 0.87
SKP2-208ENST00000546211 ZDHHC17Q8IUH5 632 aa20.49■□□□□ 0.87
SKP2-208ENST00000546211 HSFY1Q96LI6 401 aa20.49■□□□□ 0.87
SKP2-208ENST00000546211 B3GNT5Q9BYG0 378 aa20.49■□□□□ 0.87
SKP2-208ENST00000546211 CARD9Q9H257 536 aa20.49■□□□□ 0.87
SKP2-208ENST00000546211 PCDHA3Q9Y5H8 950 aa20.49■□□□□ 0.87
SKP2-208ENST00000546211 PDE2AO00408 941 aaPredicted RBP20.48■□□□□ 0.87
SKP2-208ENST00000546211 PIK3R2O00459 728 aa20.48■□□□□ 0.87
SKP2-208ENST00000546211 SYN3O14994 580 aa20.48■□□□□ 0.87
SKP2-208ENST00000546211 EN2P19622 333 aaPredicted RBP20.48■□□□□ 0.87
SKP2-208ENST00000546211 SLC11A1P49279 550 aa20.48■□□□□ 0.87
SKP2-208ENST00000546211 PIGHQ14442 188 aaPredicted RBP20.48■□□□□ 0.87
SKP2-208ENST00000546211 MAPRE1Q15691 268 aaKnown RBP20.48■□□□□ 0.87
SKP2-208ENST00000546211 CCDC142Q17RM4 750 aa20.48■□□□□ 0.87
SKP2-208ENST00000546211 PAQR9Q6ZVX9 377 aa20.48■□□□□ 0.87
SKP2-208ENST00000546211 ZNF572Q7Z3I7 529 aaPredicted RBP20.48■□□□□ 0.87
SKP2-208ENST00000546211 FAM35AQ86V20 835 aa20.48■□□□□ 0.87
SKP2-208ENST00000546211 PCED1BQ96HM7 432 aa20.48■□□□□ 0.87
SKP2-208ENST00000546211 MS4A14Q96JA4 679 aa20.48■□□□□ 0.87
SKP2-208ENST00000546211 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.48■□□□□ 0.87
SKP2-208ENST00000546211 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.48■□□□□ 0.87
SKP2-208ENST00000546211 V9GYY5 206 aaPredicted RBP20.48■□□□□ 0.87
SKP2-208ENST00000546211 DGKIO75912 1065 aa20.47■□□□□ 0.87
SKP2-208ENST00000546211 RFC1P35251 1148 aaPredicted RBP20.47■□□□□ 0.87
SKP2-208ENST00000546211 TEX35Q5T0J7 233 aa20.47■□□□□ 0.87
SKP2-208ENST00000546211 CPNE8Q86YQ8 564 aa20.47■□□□□ 0.87
SKP2-208ENST00000546211 ACTRT1Q8TDG2 376 aa20.47■□□□□ 0.87
SKP2-208ENST00000546211 FNIP1Q8TF40 1166 aa20.47■□□□□ 0.87
SKP2-208ENST00000546211 KRT35Q92764 455 aa20.47■□□□□ 0.87
SKP2-208ENST00000546211 KRT82Q9NSB4 513 aa20.47■□□□□ 0.87
SKP2-208ENST00000546211 EHD2Q9NZN4 543 aa20.47■□□□□ 0.87
SKP2-208ENST00000546211 PRKAG2Q9UGJ0 569 aa20.47■□□□□ 0.87
SKP2-208ENST00000546211 USTQ9Y2C2 406 aa20.47■□□□□ 0.87
SKP2-208ENST00000546211 GALTP07902 379 aa20.46■□□□□ 0.87
SKP2-208ENST00000546211 RPL34P49207 117 aaKnown RBP20.46■□□□□ 0.87
SKP2-208ENST00000546211 PEX5P50542 639 aa20.46■□□□□ 0.87
SKP2-208ENST00000546211 RWDD2BP57060 319 aa20.46■□□□□ 0.87
SKP2-208ENST00000546211 SLC6A3Q01959 620 aa20.46■□□□□ 0.87
SKP2-208ENST00000546211 ELAVL2Q12926 359 aaKnown RBP20.46■□□□□ 0.87
SKP2-208ENST00000546211 FAM171BQ6P995 826 aa20.46■□□□□ 0.87
SKP2-208ENST00000546211 CLEC20AQ6ZU45 233 aa20.46■□□□□ 0.87
SKP2-208ENST00000546211 RSRC2Q7L4I2 434 aaKnown RBP20.46■□□□□ 0.87
SKP2-208ENST00000546211 UBE2Q1Q7Z7E8 422 aa20.46■□□□□ 0.87
SKP2-208ENST00000546211 RASGEF1CQ8N431 466 aa20.46■□□□□ 0.87
SKP2-208ENST00000546211 NIPA2Q8N8Q9 360 aa20.46■□□□□ 0.87
SKP2-208ENST00000546211 JOSD2Q8TAC2 188 aa20.46■□□□□ 0.87
SKP2-208ENST00000546211 ALG3Q92685 438 aa20.46■□□□□ 0.87
SKP2-208ENST00000546211 TOP1MTQ969P6 601 aa20.46■□□□□ 0.87
SKP2-208ENST00000546211 MYLPFQ96A32 169 aa20.46■□□□□ 0.87
SKP2-208ENST00000546211 HCSTQ9UBK5 93 aa20.46■□□□□ 0.87
SKP2-208ENST00000546211 SF3B1O75533 1304 aaKnown RBP eCLIP20.46■□□□□ 0.871e-6■■■■■ 67.1
SKP2-208ENST00000546211 PGRMC1O00264 195 aaKnown RBP20.46■□□□□ 0.87
SKP2-208ENST00000546211 AP1G2O75843 785 aa20.46■□□□□ 0.87
SKP2-208ENST00000546211 OAZ2O95190 189 aa20.46■□□□□ 0.87
SKP2-208ENST00000546211 LCP1P13796 627 aa20.46■□□□□ 0.87
SKP2-208ENST00000546211 PSMA2P25787 234 aa20.46■□□□□ 0.87
SKP2-208ENST00000546211 SSR1P43307 286 aaKnown RBP20.46■□□□□ 0.87
SKP2-208ENST00000546211 MARCKSL1P49006 195 aa20.46■□□□□ 0.87
SKP2-208ENST00000546211 BCAR1P56945 870 aa20.46■□□□□ 0.87
SKP2-208ENST00000546211 OGDHQ02218 1023 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms