RNA–Protein interactions for RNA: ENST00000544983.1

SNHG1-221, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-221ENST00000544983 MSLNLQ96KJ4 702 aa12.46□□□□□ -0.41
SNHG1-221ENST00000544983 ZNF512Q96ME7 567 aaPredicted RBP12.46□□□□□ -0.41
SNHG1-221ENST00000544983 RIPOR3Q96MK2 946 aa12.46□□□□□ -0.41
SNHG1-221ENST00000544983 NECTIN4Q96NY8 510 aa12.46□□□□□ -0.41
SNHG1-221ENST00000544983 SEPT5Q99719 369 aaPredicted RBP12.46□□□□□ -0.41
SNHG1-221ENST00000544983 DUSP16Q9BY84 665 aa12.46□□□□□ -0.41
SNHG1-221ENST00000544983 TTYH3Q9C0H2 523 aa12.46□□□□□ -0.41
SNHG1-221ENST00000544983 ADAM7Q9H2U9 754 aa12.46□□□□□ -0.41
SNHG1-221ENST00000544983 CSNK1G1Q9HCP0 422 aa12.46□□□□□ -0.41
SNHG1-221ENST00000544983 COMMD8Q9NX08 183 aa12.46□□□□□ -0.41
SNHG1-221ENST00000544983 CLEC1BQ9P126 229 aa12.46□□□□□ -0.41
SNHG1-221ENST00000544983 CD207Q9UJ71 328 aa12.46□□□□□ -0.41
SNHG1-221ENST00000544983 FAM50BQ9Y247 325 aa12.46□□□□□ -0.41
SNHG1-221ENST00000544983 YIPF1Q9Y548 306 aa12.46□□□□□ -0.41
SNHG1-221ENST00000544983 PLXNA3P51805 1871 aa12.46□□□□□ -0.42
SNHG1-221ENST00000544983 TTC28Q96AY4 2481 aa12.45□□□□□ -0.42
SNHG1-221ENST00000544983 CCDC195A0A1B0GUA6 201 aa12.45□□□□□ -0.42
SNHG1-221ENST00000544983 RNF225M0QZC1 329 aaPredicted RBP12.45□□□□□ -0.42
SNHG1-221ENST00000544983 O00370 1275 aa12.45□□□□□ -0.42
SNHG1-221ENST00000544983 EPHB6O15197 1021 aa12.45□□□□□ -0.42
SNHG1-221ENST00000544983 LINC01565O15544 149 aa12.45□□□□□ -0.42
SNHG1-221ENST00000544983 TBX10O75333 385 aa12.45□□□□□ -0.42
SNHG1-221ENST00000544983 AP1G2O75843 785 aa12.45□□□□□ -0.42
SNHG1-221ENST00000544983 SETSIPP0DME0 302 aa12.45□□□□□ -0.42
SNHG1-221ENST00000544983 FERP16591 822 aa12.45□□□□□ -0.42
SNHG1-221ENST00000544983 NPR3P17342 541 aa12.45□□□□□ -0.42
SNHG1-221ENST00000544983 GNA15P30679 374 aa12.45□□□□□ -0.42
SNHG1-221ENST00000544983 GRIK1P39086 918 aa12.45□□□□□ -0.42
SNHG1-221ENST00000544983 MTHFRP42898 656 aa12.45□□□□□ -0.42
SNHG1-221ENST00000544983 PDE6CP51160 858 aa12.45□□□□□ -0.42
SNHG1-221ENST00000544983 BCAT1P54687 386 aa12.45□□□□□ -0.42
SNHG1-221ENST00000544983 TWF1Q12792 350 aa12.45□□□□□ -0.42
SNHG1-221ENST00000544983 ATAT1Q5SQI0 421 aa12.45□□□□□ -0.42
SNHG1-221ENST00000544983 PPP1R26Q5T8A7 1209 aaPredicted RBP12.45□□□□□ -0.42
SNHG1-221ENST00000544983 SYCE2Q6PIF2 218 aa12.45□□□□□ -0.42
SNHG1-221ENST00000544983 EP400NLQ6ZTU2 488 aa12.45□□□□□ -0.42
SNHG1-221ENST00000544983 PAQR9Q6ZVX9 377 aa12.45□□□□□ -0.42
SNHG1-221ENST00000544983 GPR149Q86SP6 731 aa12.45□□□□□ -0.42
SNHG1-221ENST00000544983 VSTM4Q8IW00 320 aa12.45□□□□□ -0.42
SNHG1-221ENST00000544983 SMRP1Q8NCR6 262 aa12.45□□□□□ -0.42
SNHG1-221ENST00000544983 ZNF606Q8WXB4 792 aa12.45□□□□□ -0.42
SNHG1-221ENST00000544983 PSMG2Q969U7 264 aa12.45□□□□□ -0.42
SNHG1-221ENST00000544983 ZNF518BQ9C0D4 1074 aa12.45□□□□□ -0.42
SNHG1-221ENST00000544983 GPR88Q9GZN0 384 aa12.45□□□□□ -0.42
SNHG1-221ENST00000544983 NLRC4Q9NPP4 1024 aa12.45□□□□□ -0.42
SNHG1-221ENST00000544983 AVENQ9NQS1 362 aaPredicted RBP12.45□□□□□ -0.42
SNHG1-221ENST00000544983 FAM49BQ9NUQ9 324 aa12.45□□□□□ -0.42
SNHG1-221ENST00000544983 AIPL1Q9NZN9 384 aa12.45□□□□□ -0.42
SNHG1-221ENST00000544983 UXTQ9UBK9 157 aaPredicted RBP12.45□□□□□ -0.42
SNHG1-221ENST00000544983 CAPN11Q9UMQ6 739 aa12.45□□□□□ -0.42
SNHG1-221ENST00000544983 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.45□□□□□ -0.42
SNHG1-221ENST00000544983 SLC27A5Q9Y2P5 690 aa12.45□□□□□ -0.42
SNHG1-221ENST00000544983 LUC7L2Q9Y383 392 aaKnown RBP12.45□□□□□ -0.42
SNHG1-221ENST00000544983 PTPRDP23468 1912 aa12.45□□□□□ -0.42
SNHG1-221ENST00000544983 ZNF197O14709 1029 aa12.44□□□□□ -0.42
SNHG1-221ENST00000544983 CYP26A1O43174 497 aa12.44□□□□□ -0.42
SNHG1-221ENST00000544983 THAP12O43422 761 aa12.44□□□□□ -0.42
SNHG1-221ENST00000544983 RFPL2O75678 378 aa12.44□□□□□ -0.42
SNHG1-221ENST00000544983 RTN3O95197 1032 aaPredicted RBP12.44□□□□□ -0.42
SNHG1-221ENST00000544983 CCDC130P13994 396 aa12.44□□□□□ -0.42
SNHG1-221ENST00000544983 PTPN2P17706 415 aa12.44□□□□□ -0.42
SNHG1-221ENST00000544983 CLCN1P35523 988 aa12.44□□□□□ -0.42
SNHG1-221ENST00000544983 KRT9P35527 623 aa12.44□□□□□ -0.42
SNHG1-221ENST00000544983 SNX16P57768 344 aa12.44□□□□□ -0.42
SNHG1-221ENST00000544983 ZBED6P86452 979 aa12.44□□□□□ -0.42
SNHG1-221ENST00000544983 BST2Q10589 180 aaKnown RBP12.44□□□□□ -0.42
SNHG1-221ENST00000544983 ORC1Q13415 861 aa12.44□□□□□ -0.42
SNHG1-221ENST00000544983 TAF12Q16514 161 aa12.44□□□□□ -0.42
SNHG1-221ENST00000544983 LEXMQ3ZCV2 418 aa12.44□□□□□ -0.42
SNHG1-221ENST00000544983 SCN4BQ8IWT1 228 aa12.44□□□□□ -0.42
SNHG1-221ENST00000544983 PPM1EQ8WY54 764 aa12.44□□□□□ -0.42
SNHG1-221ENST00000544983 SMG7Q92540 1137 aaKnown RBP12.44□□□□□ -0.42
SNHG1-221ENST00000544983 BAP1Q92560 729 aa12.44□□□□□ -0.42
SNHG1-221ENST00000544983 TRMT2BQ96GJ1 504 aaKnown RBP12.44□□□□□ -0.42
SNHG1-221ENST00000544983 S1PR5Q9H228 398 aa12.44□□□□□ -0.42
SNHG1-221ENST00000544983 LHX5Q9H2C1 402 aa12.44□□□□□ -0.42
SNHG1-221ENST00000544983 CRISPLD1Q9H336 500 aa12.44□□□□□ -0.42
SNHG1-221ENST00000544983 PIDD1Q9HB75 910 aa12.44□□□□□ -0.42
SNHG1-221ENST00000544983 KRT82Q9NSB4 513 aa12.44□□□□□ -0.42
SNHG1-221ENST00000544983 ZMYM5Q9UJ78 669 aa12.44□□□□□ -0.42
SNHG1-221ENST00000544983 AJAP1Q9UKB5 411 aaPredicted RBP12.44□□□□□ -0.42
SNHG1-221ENST00000544983 TSPAN16Q9UKR8 245 aa12.44□□□□□ -0.42
SNHG1-221ENST00000544983 PCDHGC3Q9UN70 934 aa12.44□□□□□ -0.42
SNHG1-221ENST00000544983 CEP83Q9Y592 693 aa12.44□□□□□ -0.42
SNHG1-221ENST00000544983 BZW2Q9Y6E2 419 aaKnown RBP12.44□□□□□ -0.42
SNHG1-221ENST00000544983 VCANP13611 3396 aa12.44□□□□□ -0.42
SNHG1-221ENST00000544983 GOLGA6L3A6NEY3 463 aa12.43□□□□□ -0.42
SNHG1-221ENST00000544983 F8VP50 259 aa12.43□□□□□ -0.42
SNHG1-221ENST00000544983 CLDN5O00501 218 aa12.43□□□□□ -0.42
SNHG1-221ENST00000544983 XPO1O14980 1071 aaKnown RBP12.43□□□□□ -0.42
SNHG1-221ENST00000544983 MICAL2O94851 1124 aa12.43□□□□□ -0.42
SNHG1-221ENST00000544983 CYP11B1P15538 503 aa12.43□□□□□ -0.42
SNHG1-221ENST00000544983 KCNA5P22460 613 aa12.43□□□□□ -0.42
SNHG1-221ENST00000544983 ADORA2BP29275 332 aa12.43□□□□□ -0.42
SNHG1-221ENST00000544983 PLA2G5P39877 138 aa12.43□□□□□ -0.42
SNHG1-221ENST00000544983 PPP3CCP48454 512 aa12.43□□□□□ -0.42
SNHG1-221ENST00000544983 ZNF75DP51815 510 aa12.43□□□□□ -0.42
SNHG1-221ENST00000544983 EPHA5P54756 1037 aa12.43□□□□□ -0.42
SNHG1-221ENST00000544983 RBM10P98175 930 aaKnown RBP12.43□□□□□ -0.42
SNHG1-221ENST00000544983 SMAD4Q13485 552 aaKnown RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms