RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 SH3RF2Q8TEC5 729 aa24.24■■□□□ 1.47
CDKN3-207ENST00000543789 MTMR12Q9C0I1 747 aa24.24■■□□□ 1.47
CDKN3-207ENST00000543789 SMOC1Q9H4F8 434 aa24.24■■□□□ 1.47
CDKN3-207ENST00000543789 ANGPTL2Q9UKU9 493 aa24.24■■□□□ 1.47
CDKN3-207ENST00000543789 HCRTO43612 131 aa24.23■■□□□ 1.47
CDKN3-207ENST00000543789 RHOBTB1O94844 696 aa24.23■■□□□ 1.47
CDKN3-207ENST00000543789 TMEM191BP0C7N4 346 aa24.23■■□□□ 1.47
CDKN3-207ENST00000543789 HDCP19113 662 aa24.23■■□□□ 1.47
CDKN3-207ENST00000543789 MAGEA11P43364 429 aa24.23■■□□□ 1.47
CDKN3-207ENST00000543789 MYO1EQ12965 1108 aa24.23■■□□□ 1.47
CDKN3-207ENST00000543789 USP4Q13107 963 aa24.23■■□□□ 1.47
CDKN3-207ENST00000543789 DMC1Q14565 340 aa24.23■■□□□ 1.47
CDKN3-207ENST00000543789 ELF2Q15723 593 aa24.23■■□□□ 1.47
CDKN3-207ENST00000543789 C4orf50Q6ZRC1 276 aa24.23■■□□□ 1.47
CDKN3-207ENST00000543789 CCDC73Q6ZRK6 1079 aa24.23■■□□□ 1.47
CDKN3-207ENST00000543789 CCDC26Q8TAB7 109 aa24.23■■□□□ 1.47
CDKN3-207ENST00000543789 EZH1Q92800 747 aaPredicted RBP24.23■■□□□ 1.47
CDKN3-207ENST00000543789 ACDQ96AP0 544 aa24.23■■□□□ 1.47
CDKN3-207ENST00000543789 ANKRD36BP1Q96IX9 119 aa24.23■■□□□ 1.47
CDKN3-207ENST00000543789 DUSP15Q9H1R2 295 aaPredicted RBP24.23■■□□□ 1.47
CDKN3-207ENST00000543789 LINC00597Q9H2U6 94 aa24.23■■□□□ 1.47
CDKN3-207ENST00000543789 PANK4Q9NVE7 773 aa24.23■■□□□ 1.47
CDKN3-207ENST00000543789 MAGEC2Q9UBF1 373 aaPredicted RBP24.23■■□□□ 1.47
CDKN3-207ENST00000543789 SDK1Q7Z5N4 2213 aa24.23■■□□□ 1.47
CDKN3-207ENST00000543789 FRMD3A2A2Y4 597 aa24.22■■□□□ 1.47
CDKN3-207ENST00000543789 C2orf78A6NCI8 922 aa24.22■■□□□ 1.47
CDKN3-207ENST00000543789 DCLK1O15075 740 aa24.22■■□□□ 1.47
CDKN3-207ENST00000543789 KCNB1Q14721 858 aa24.22■■□□□ 1.47
CDKN3-207ENST00000543789 GPD1LQ8N335 351 aa24.22■■□□□ 1.47
CDKN3-207ENST00000543789 LSM14BQ9BX40 385 aaKnown RBP24.22■■□□□ 1.47
CDKN3-207ENST00000543789 PANK2Q9BZ23 570 aa24.22■■□□□ 1.47
CDKN3-207ENST00000543789 INTS13Q9NVM9 706 aa24.22■■□□□ 1.47
CDKN3-207ENST00000543789 ARHGAP26Q9UNA1 814 aa24.22■■□□□ 1.47
CDKN3-207ENST00000543789 ATP2C2O75185 946 aa24.21■■□□□ 1.47
CDKN3-207ENST00000543789 PRPF6O94906 941 aaKnown RBP24.21■■□□□ 1.47
CDKN3-207ENST00000543789 TCF3P15923 654 aa24.21■■□□□ 1.47
CDKN3-207ENST00000543789 PDCP20941 246 aa24.21■■□□□ 1.47
CDKN3-207ENST00000543789 LMO2P25791 158 aa24.21■■□□□ 1.47
CDKN3-207ENST00000543789 PMLP29590 882 aa24.21■■□□□ 1.47
CDKN3-207ENST00000543789 PDE6CP51160 858 aa24.21■■□□□ 1.47
CDKN3-207ENST00000543789 VSTM1Q6UX27 236 aa24.21■■□□□ 1.47
CDKN3-207ENST00000543789 HPDLQ96IR7 371 aa24.21■■□□□ 1.47
CDKN3-207ENST00000543789 SPATA17Q96L03 361 aa24.21■■□□□ 1.47
CDKN3-207ENST00000543789 SYT15Q9BQS2 421 aa24.21■■□□□ 1.47
CDKN3-207ENST00000543789 FGFBP2Q9BYJ0 223 aa24.21■■□□□ 1.47
CDKN3-207ENST00000543789 CDH9Q9ULB4 789 aa24.21■■□□□ 1.47
CDKN3-207ENST00000543789 KIAA0391O15091 583 aaKnown RBP24.2■■□□□ 1.46
CDKN3-207ENST00000543789 GRIK1P39086 918 aa24.2■■□□□ 1.46
CDKN3-207ENST00000543789 STAT6P42226 847 aa24.2■■□□□ 1.46
CDKN3-207ENST00000543789 CREB5Q02930 508 aa24.2■■□□□ 1.46
CDKN3-207ENST00000543789 CEBPZQ03701 1054 aaKnown RBP24.2■■□□□ 1.46
CDKN3-207ENST00000543789 LMBRD2Q68DH5 695 aaPredicted RBP24.2■■□□□ 1.46
CDKN3-207ENST00000543789 RNF43Q68DV7 783 aa24.2■■□□□ 1.46
CDKN3-207ENST00000543789 LIMS2Q7Z4I7 341 aa24.2■■□□□ 1.46
CDKN3-207ENST00000543789 CEP295NLQ96MC4 621 aa24.2■■□□□ 1.46
CDKN3-207ENST00000543789 ZNF233A6NK53 670 aa24.19■■□□□ 1.46
CDKN3-207ENST00000543789 NFATC1O95644 943 aa24.19■■□□□ 1.46
CDKN3-207ENST00000543789 CAVIN2O95810 425 aa24.19■■□□□ 1.46
CDKN3-207ENST00000543789 TNNC2P02585 160 aa24.19■■□□□ 1.46
CDKN3-207ENST00000543789 PFKLP17858 780 aa24.19■■□□□ 1.46
CDKN3-207ENST00000543789 BDNFP23560 247 aa24.19■■□□□ 1.46
CDKN3-207ENST00000543789 DGKEP52429 567 aa24.19■■□□□ 1.46
CDKN3-207ENST00000543789 PSMC1P62191 440 aaKnown RBP24.19■■□□□ 1.46
CDKN3-207ENST00000543789 SURF1Q15526 300 aa24.19■■□□□ 1.46
CDKN3-207ENST00000543789 MAPRE1Q15691 268 aaKnown RBP24.19■■□□□ 1.46
CDKN3-207ENST00000543789 DUOXA2Q1HG44 320 aa24.19■■□□□ 1.46
CDKN3-207ENST00000543789 TCEAL6Q6IPX3 200 aa24.19■■□□□ 1.46
CDKN3-207ENST00000543789 TSTD1Q8NFU3 115 aa24.19■■□□□ 1.46
CDKN3-207ENST00000543789 OR5B17Q8NGF7 314 aa24.19■■□□□ 1.46
CDKN3-207ENST00000543789 KBTBD7Q8WVZ9 684 aa24.19■■□□□ 1.46
CDKN3-207ENST00000543789 TCEAL3Q969E4 200 aa24.19■■□□□ 1.46
CDKN3-207ENST00000543789 MYLPFQ96A32 169 aa24.19■■□□□ 1.46
CDKN3-207ENST00000543789 TRPM5Q9NZQ8 1165 aa24.19■■□□□ 1.46
CDKN3-207ENST00000543789 KMT2BQ9UMN6 2715 aaPredicted RBP24.19■■□□□ 1.46
CDKN3-207ENST00000543789 ANK1P16157 1881 aa24.19■■□□□ 1.46
CDKN3-207ENST00000543789 BCLAF3A2AJT9 711 aaKnown RBP24.18■■□□□ 1.46
CDKN3-207ENST00000543789 KCNK5O95279 499 aa24.18■■□□□ 1.46
CDKN3-207ENST00000543789 PDGFRBP09619 1106 aa24.18■■□□□ 1.46
CDKN3-207ENST00000543789 SHC2P98077 582 aa24.18■■□□□ 1.46
CDKN3-207ENST00000543789 CUL4AQ13619 759 aa24.18■■□□□ 1.46
CDKN3-207ENST00000543789 USP39Q53GS9 565 aaKnown RBP24.18■■□□□ 1.46
CDKN3-207ENST00000543789 FAM173BQ6P4H8 233 aa24.18■■□□□ 1.46
CDKN3-207ENST00000543789 DENND5BQ6ZUT9 1274 aa24.18■■□□□ 1.46
CDKN3-207ENST00000543789 CCDC65Q8IXS2 484 aa24.18■■□□□ 1.46
CDKN3-207ENST00000543789 USP33Q8TEY7 942 aa24.18■■□□□ 1.46
CDKN3-207ENST00000543789 CRTAC1Q9NQ79 661 aa24.18■■□□□ 1.46
CDKN3-207ENST00000543789 ANXA13P27216 316 aa24.17■■□□□ 1.46
CDKN3-207ENST00000543789 GBP1P32455 592 aa24.17■■□□□ 1.46
CDKN3-207ENST00000543789 ZXDBP98169 803 aa24.17■■□□□ 1.46
CDKN3-207ENST00000543789 CYP27A1Q02318 531 aa24.17■■□□□ 1.46
CDKN3-207ENST00000543789 RESTQ13127 1097 aa24.17■■□□□ 1.46
CDKN3-207ENST00000543789 STXBP4Q6ZWJ1 553 aa24.17■■□□□ 1.46
CDKN3-207ENST00000543789 C11orf74Q86VG3 221 aa24.17■■□□□ 1.46
CDKN3-207ENST00000543789 EHD2Q9NZN4 543 aa24.17■■□□□ 1.46
CDKN3-207ENST00000543789 INVSQ9Y283 1065 aa24.17■■□□□ 1.46
CDKN3-207ENST00000543789 KIF26AQ9ULI4 1882 aaPredicted RBP24.17■■□□□ 1.46
CDKN3-207ENST00000543789 RALGAPA1Q6GYQ0 2036 aa24.17■■□□□ 1.46
CDKN3-207ENST00000543789 PTPRJQ12913 1337 aa24.16■■□□□ 1.46
CDKN3-207ENST00000543789 A0A087X0B3 334 aa24.16■■□□□ 1.46
CDKN3-207ENST00000543789 K7EQS6 105 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms