RNA–Protein interactions for RNA: ENST00000543537.5

COPS7A-217, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 802 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-217ENST00000543537 TGM5O43548 720 aa12.2□□□□□ -0.46
COPS7A-217ENST00000543537 ASS1P00966 412 aaKnown RBP12.2□□□□□ -0.46
COPS7A-217ENST00000543537 POU2F2P09086 479 aa12.2□□□□□ -0.46
COPS7A-217ENST00000543537 FAM228BP0C875 321 aa12.2□□□□□ -0.46
COPS7A-217ENST00000543537 FGFR3P22607 806 aa12.2□□□□□ -0.46
COPS7A-217ENST00000543537 HOXA9P31269 272 aa12.2□□□□□ -0.46
COPS7A-217ENST00000543537 PNPLA4P41247 253 aa12.2□□□□□ -0.46
COPS7A-217ENST00000543537 PAFAH1B1P43034 410 aa12.2□□□□□ -0.46
COPS7A-217ENST00000543537 SNX16P57768 344 aa12.2□□□□□ -0.46
COPS7A-217ENST00000543537 GPC5P78333 572 aa12.2□□□□□ -0.46
COPS7A-217ENST00000543537 CYP27A1Q02318 531 aa12.2□□□□□ -0.46
COPS7A-217ENST00000543537 STILQ15468 1287 aa12.2□□□□□ -0.46
COPS7A-217ENST00000543537 PPP2R5EQ16537 467 aa12.2□□□□□ -0.46
COPS7A-217ENST00000543537 CCDC149Q6ZUS6 474 aa12.2□□□□□ -0.46
COPS7A-217ENST00000543537 OTOP3Q7RTS5 596 aa12.2□□□□□ -0.46
COPS7A-217ENST00000543537 PDCL2Q8N4E4 241 aa12.2□□□□□ -0.46
COPS7A-217ENST00000543537 CEP120Q8N960 986 aa12.2□□□□□ -0.46
COPS7A-217ENST00000543537 TDRD5Q8NAT2 981 aaKnown RBP12.2□□□□□ -0.46
COPS7A-217ENST00000543537 MSANTD4Q8NCY6 345 aa12.2□□□□□ -0.46
COPS7A-217ENST00000543537 PLEKHO2Q8TD55 490 aa12.2□□□□□ -0.46
COPS7A-217ENST00000543537 RIN2Q8WYP3 895 aaPredicted RBP12.2□□□□□ -0.46
COPS7A-217ENST00000543537 RFFLQ8WZ73 363 aa12.2□□□□□ -0.46
COPS7A-217ENST00000543537 UBXN4Q92575 508 aa12.2□□□□□ -0.46
COPS7A-217ENST00000543537 DDX27Q96GQ7 796 aaKnown RBP12.2□□□□□ -0.46
COPS7A-217ENST00000543537 ZBTB45Q96K62 511 aaPredicted RBP12.2□□□□□ -0.46
COPS7A-217ENST00000543537 SNX27Q96L92 541 aa12.2□□□□□ -0.46
COPS7A-217ENST00000543537 CLSTN3Q9BQT9 956 aa12.2□□□□□ -0.46
COPS7A-217ENST00000543537 SELENOOQ9BVL4 669 aa12.2□□□□□ -0.46
COPS7A-217ENST00000543537 NIF3L1Q9GZT8 377 aa12.2□□□□□ -0.46
COPS7A-217ENST00000543537 ISCUQ9H1K1 167 aa12.2□□□□□ -0.46
COPS7A-217ENST00000543537 IKZF4Q9H2S9 585 aa12.2□□□□□ -0.46
COPS7A-217ENST00000543537 WDR6Q9NNW5 1121 aaKnown RBP12.2□□□□□ -0.46
COPS7A-217ENST00000543537 SLC38A7Q9NVC3 462 aa12.2□□□□□ -0.46
COPS7A-217ENST00000543537 UVRAGQ9P2Y5 699 aa12.2□□□□□ -0.46
COPS7A-217ENST00000543537 CACNG4Q9UBN1 327 aa12.2□□□□□ -0.46
COPS7A-217ENST00000543537 CEP83Q9Y592 693 aa12.2□□□□□ -0.46
COPS7A-217ENST00000543537 MRFAP1Q9Y605 127 aa12.2□□□□□ -0.46
COPS7A-217ENST00000543537 UQCRHLA0A096LP55 91 aa12.19□□□□□ -0.46
COPS7A-217ENST00000543537 MEFVO15553 781 aaPredicted RBP12.19□□□□□ -0.46
COPS7A-217ENST00000543537 B3GAT3O94766 335 aa12.19□□□□□ -0.46
COPS7A-217ENST00000543537 LSM8O95777 96 aaKnown RBP12.19□□□□□ -0.46
COPS7A-217ENST00000543537 UQCRHP07919 91 aa12.19□□□□□ -0.46
COPS7A-217ENST00000543537 WEE2P0C1S8 567 aa12.19□□□□□ -0.46
COPS7A-217ENST00000543537 CYP3A5P20815 502 aa12.19□□□□□ -0.46
COPS7A-217ENST00000543537 RPL9P32969 192 aaKnown RBP12.19□□□□□ -0.46
COPS7A-217ENST00000543537 USP8P40818 1118 aa12.19□□□□□ -0.46
COPS7A-217ENST00000543537 NOP14P78316 857 aaKnown RBP12.19□□□□□ -0.46
COPS7A-217ENST00000543537 FAM171A1Q5VUB5 890 aa12.19□□□□□ -0.46
COPS7A-217ENST00000543537 TDRD10Q5VZ19 366 aaKnown RBP12.19□□□□□ -0.46
COPS7A-217ENST00000543537 ZBTB33Q86T24 672 aa12.19□□□□□ -0.46
COPS7A-217ENST00000543537 SLC35F6Q8N357 371 aa12.19□□□□□ -0.46
COPS7A-217ENST00000543537 KREMEN2Q8NCW0 462 aa12.19□□□□□ -0.46
COPS7A-217ENST00000543537 FEZF2Q8TBJ5 459 aa12.19□□□□□ -0.46
COPS7A-217ENST00000543537 RUBCNQ92622 972 aa12.19□□□□□ -0.46
COPS7A-217ENST00000543537 ZNF707Q96C28 371 aaPredicted RBP12.19□□□□□ -0.46
COPS7A-217ENST00000543537 ACSF2Q96CM8 615 aaPredicted RBP12.19□□□□□ -0.46
COPS7A-217ENST00000543537 B3GALT6Q96L58 329 aa12.19□□□□□ -0.46
COPS7A-217ENST00000543537 ZMAT2Q96NC0 199 aaKnown RBP12.19□□□□□ -0.46
COPS7A-217ENST00000543537 NAP1L3Q99457 506 aaPredicted RBP12.19□□□□□ -0.46
COPS7A-217ENST00000543537 SYT11Q9BT88 431 aa12.19□□□□□ -0.46
COPS7A-217ENST00000543537 ARGLU1Q9NWB6 273 aaPredicted RBP12.19□□□□□ -0.46
COPS7A-217ENST00000543537 MTRRQ9UBK8 725 aa12.19□□□□□ -0.46
COPS7A-217ENST00000543537 FBXW11Q9UKB1 542 aa12.19□□□□□ -0.46
COPS7A-217ENST00000543537 NENFQ9UMX5 172 aa12.19□□□□□ -0.46
COPS7A-217ENST00000543537 BACE2Q9Y5Z0 518 aa12.19□□□□□ -0.46
COPS7A-217ENST00000543537 TRIP11Q15643 1979 aa12.19□□□□□ -0.46
COPS7A-217ENST00000543537 C2orf16Q68DN1 1984 aa12.19□□□□□ -0.46
COPS7A-217ENST00000543537 PLXNA3P51805 1871 aa12.19□□□□□ -0.46
COPS7A-217ENST00000543537 VWA8A3KMH1 1905 aa12.18□□□□□ -0.46
COPS7A-217ENST00000543537 CCDC195A0A1B0GUA6 201 aa12.18□□□□□ -0.46
COPS7A-217ENST00000543537 CTAGE15A4D2H0 777 aa12.18□□□□□ -0.46
COPS7A-217ENST00000543537 MIF4GDA9UHW6 222 aaKnown RBP12.18□□□□□ -0.46
COPS7A-217ENST00000543537 DDX3XO00571 662 aaKnown RBP eCLIP12.18□□□□□ -0.464e-6■■■■■ 27.3
COPS7A-217ENST00000543537 ZNF263O14978 683 aa12.18□□□□□ -0.46
COPS7A-217ENST00000543537 TRAPPC3O43617 180 aa12.18□□□□□ -0.46
COPS7A-217ENST00000543537 ZMYND10O75800 440 aa12.18□□□□□ -0.46
COPS7A-217ENST00000543537 PLEKP08567 350 aaPredicted RBP12.18□□□□□ -0.46
COPS7A-217ENST00000543537 PAEPP09466 180 aa12.18□□□□□ -0.46
COPS7A-217ENST00000543537 CTAGE8P0CG41 777 aa12.18□□□□□ -0.46
COPS7A-217ENST00000543537 CYP11B1P15538 503 aa12.18□□□□□ -0.46
COPS7A-217ENST00000543537 NOP2P46087 812 aaKnown RBP12.18□□□□□ -0.46
COPS7A-217ENST00000543537 CLCNKBP51801 687 aa12.18□□□□□ -0.46
COPS7A-217ENST00000543537 TFAMQ00059 246 aaKnown RBP12.18□□□□□ -0.46
COPS7A-217ENST00000543537 SOX4Q06945 474 aaPredicted RBP12.18□□□□□ -0.46
COPS7A-217ENST00000543537 MTMR3Q13615 1198 aa12.18□□□□□ -0.46
COPS7A-217ENST00000543537 RAB33AQ14088 237 aa12.18□□□□□ -0.46
COPS7A-217ENST00000543537 TMEM132DQ14C87 1099 aa12.18□□□□□ -0.46
COPS7A-217ENST00000543537 ENOX2Q16206 610 aaKnown RBP12.18□□□□□ -0.46
COPS7A-217ENST00000543537 ZNF699Q32M78 642 aa12.18□□□□□ -0.46
COPS7A-217ENST00000543537 SLC10A6Q3KNW5 377 aa12.18□□□□□ -0.46
COPS7A-217ENST00000543537 ZNF667Q5HYK9 610 aa12.18□□□□□ -0.46
COPS7A-217ENST00000543537 LIN9Q5TKA1 542 aa12.18□□□□□ -0.46
COPS7A-217ENST00000543537 CTAGE6Q86UF2 777 aa12.18□□□□□ -0.46
COPS7A-217ENST00000543537 CTAGE4Q8IX94 777 aa12.18□□□□□ -0.46
COPS7A-217ENST00000543537 FBXL6Q8N531 539 aa12.18□□□□□ -0.46
COPS7A-217ENST00000543537 LRRC52Q8N7C0 313 aa12.18□□□□□ -0.46
COPS7A-217ENST00000543537 BEST2Q8NFU1 509 aa12.18□□□□□ -0.46
COPS7A-217ENST00000543537 EPS8L1Q8TE68 723 aa12.18□□□□□ -0.46
COPS7A-217ENST00000543537 ZNF516Q92618 1163 aa12.18□□□□□ -0.46
COPS7A-217ENST00000543537 RABGGTAQ92696 567 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms