RNA–Protein interactions for RNA: ENST00000542876.1

PPP1CA-210, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 3

Gene PPP1CA, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-210ENST00000542876 CNTNAP3Q9BZ76 1288 aa18.64■□□□□ 0.57
PPP1CA-210ENST00000542876 ARRDC1-AS1Q9H2J1 176 aa18.64■□□□□ 0.57
PPP1CA-210ENST00000542876 TNMDQ9H2S6 317 aa18.64■□□□□ 0.57
PPP1CA-210ENST00000542876 EHD2Q9NZN4 543 aa18.64■□□□□ 0.57
PPP1CA-210ENST00000542876 A0A087X0B3 334 aa18.63■□□□□ 0.57
PPP1CA-210ENST00000542876 HCRTO43612 131 aa18.63■□□□□ 0.57
PPP1CA-210ENST00000542876 GDF9O60383 454 aa18.63■□□□□ 0.57
PPP1CA-210ENST00000542876 AKAP3O75969 853 aa18.63■□□□□ 0.57
PPP1CA-210ENST00000542876 HDCP19113 662 aa18.63■□□□□ 0.57
PPP1CA-210ENST00000542876 ANXA13P27216 316 aa18.63■□□□□ 0.57
PPP1CA-210ENST00000542876 HOXC13P31276 330 aa18.63■□□□□ 0.57
PPP1CA-210ENST00000542876 GRIK1P39086 918 aa18.63■□□□□ 0.57
PPP1CA-210ENST00000542876 PSMC1P62191 440 aaKnown RBP18.63■□□□□ 0.57
PPP1CA-210ENST00000542876 PSMD2Q13200 908 aa18.63■□□□□ 0.57
PPP1CA-210ENST00000542876 ZNF77Q15935 545 aa18.63■□□□□ 0.57
PPP1CA-210ENST00000542876 CCDC142Q17RM4 750 aa18.63■□□□□ 0.57
PPP1CA-210ENST00000542876 SCARA3Q6AZY7 606 aa18.63■□□□□ 0.57
PPP1CA-210ENST00000542876 FAM171BQ6P995 826 aa18.63■□□□□ 0.57
PPP1CA-210ENST00000542876 ARL14EPQ8N8R7 260 aaPredicted RBP18.63■□□□□ 0.57
PPP1CA-210ENST00000542876 OR5B17Q8NGF7 314 aa18.63■□□□□ 0.57
PPP1CA-210ENST00000542876 CCDC26Q8TAB7 109 aa18.63■□□□□ 0.57
PPP1CA-210ENST00000542876 RIN3Q8TB24 985 aa18.63■□□□□ 0.57
PPP1CA-210ENST00000542876 SH3RF2Q8TEC5 729 aa18.63■□□□□ 0.57
PPP1CA-210ENST00000542876 CD101Q93033 1021 aa18.63■□□□□ 0.57
PPP1CA-210ENST00000542876 ACDQ96AP0 544 aa18.63■□□□□ 0.57
PPP1CA-210ENST00000542876 CEP295NLQ96MC4 621 aa18.63■□□□□ 0.57
PPP1CA-210ENST00000542876 CUEDC2Q9H467 287 aa18.63■□□□□ 0.57
PPP1CA-210ENST00000542876 FBRSL1Q9HCM7 1045 aaKnown RBP18.63■□□□□ 0.57
PPP1CA-210ENST00000542876 MTMR6Q9Y217 621 aa18.63■□□□□ 0.57
PPP1CA-210ENST00000542876 WNT6Q9Y6F9 365 aa18.63■□□□□ 0.57
PPP1CA-210ENST00000542876 TPRP12270 2363 aaKnown RBP18.62■□□□□ 0.57
PPP1CA-210ENST00000542876 ATP2C2O75185 946 aa18.62■□□□□ 0.57
PPP1CA-210ENST00000542876 ADRB1P08588 477 aa18.62■□□□□ 0.57
PPP1CA-210ENST00000542876 PDGFRBP09619 1106 aa18.62■□□□□ 0.57
PPP1CA-210ENST00000542876 KCNA4P22459 653 aa18.62■□□□□ 0.57
PPP1CA-210ENST00000542876 NASPP49321 788 aaPredicted RBP18.62■□□□□ 0.57
PPP1CA-210ENST00000542876 CYP27A1Q02318 531 aa18.62■□□□□ 0.57
PPP1CA-210ENST00000542876 USP4Q13107 963 aa18.62■□□□□ 0.57
PPP1CA-210ENST00000542876 KBTBD6Q86V97 674 aa18.62■□□□□ 0.57
PPP1CA-210ENST00000542876 CBWD2Q8IUF1 395 aa18.62■□□□□ 0.57
PPP1CA-210ENST00000542876 WDR49Q8IV35 697 aa18.62■□□□□ 0.57
PPP1CA-210ENST00000542876 RPLP0P6Q8NHW5 317 aa18.62■□□□□ 0.57
PPP1CA-210ENST00000542876 MYLPFQ96A32 169 aa18.62■□□□□ 0.57
PPP1CA-210ENST00000542876 SPATA17Q96L03 361 aa18.62■□□□□ 0.57
PPP1CA-210ENST00000542876 SLC22A12Q96S37 553 aa18.62■□□□□ 0.57
PPP1CA-210ENST00000542876 HSPBP1Q9NZL4 362 aa18.62■□□□□ 0.57
PPP1CA-210ENST00000542876 TRPM5Q9NZQ8 1165 aa18.62■□□□□ 0.57
PPP1CA-210ENST00000542876 C2orf78A6NCI8 922 aa18.61■□□□□ 0.57
PPP1CA-210ENST00000542876 TRIM66O15016 1216 aa18.61■□□□□ 0.57
PPP1CA-210ENST00000542876 EIF3DO15371 548 aaKnown RBP eCLIP18.61■□□□□ 0.57
PPP1CA-210ENST00000542876 STX6O43752 255 aa18.61■□□□□ 0.57
PPP1CA-210ENST00000542876 EPN2O95208 641 aa18.61■□□□□ 0.57
PPP1CA-210ENST00000542876 ZNF806P0C7X5 589 aa18.61■□□□□ 0.57
PPP1CA-210ENST00000542876 TNNI1P19237 187 aa18.61■□□□□ 0.57
PPP1CA-210ENST00000542876 WARSP23381 471 aaKnown RBP18.61■□□□□ 0.57
PPP1CA-210ENST00000542876 BDNFP23560 247 aa18.61■□□□□ 0.57
PPP1CA-210ENST00000542876 LMO2P25791 158 aa18.61■□□□□ 0.57
PPP1CA-210ENST00000542876 ASIC1P78348 528 aa18.61■□□□□ 0.57
PPP1CA-210ENST00000542876 EML3Q32P44 896 aa18.61■□□□□ 0.57
PPP1CA-210ENST00000542876 DENND5BQ6ZUT9 1274 aa18.61■□□□□ 0.57
PPP1CA-210ENST00000542876 SYT13Q7L8C5 426 aa18.61■□□□□ 0.57
PPP1CA-210ENST00000542876 KBTBD7Q8WVZ9 684 aa18.61■□□□□ 0.57
PPP1CA-210ENST00000542876 HPS3Q969F9 1004 aa18.61■□□□□ 0.57
PPP1CA-210ENST00000542876 HHIPQ96QV1 700 aa18.61■□□□□ 0.57
PPP1CA-210ENST00000542876 FNBP1Q96RU3 617 aa18.61■□□□□ 0.57
PPP1CA-210ENST00000542876 SNX25Q9H3E2 840 aa18.61■□□□□ 0.57
PPP1CA-210ENST00000542876 FOXD4L1Q9NU39 408 aa18.61■□□□□ 0.57
PPP1CA-210ENST00000542876 GCNT4Q9P109 453 aa18.61■□□□□ 0.57
PPP1CA-210ENST00000542876 ARHGAP26Q9UNA1 814 aa18.61■□□□□ 0.57
PPP1CA-210ENST00000542876 PCDHGA5Q9Y5G8 931 aa18.61■□□□□ 0.57
PPP1CA-210ENST00000542876 PTPRJQ12913 1337 aa18.6■□□□□ 0.57
PPP1CA-210ENST00000542876 SPTLC2O15270 562 aa18.6■□□□□ 0.57
PPP1CA-210ENST00000542876 NFATC1O95644 943 aa18.6■□□□□ 0.57
PPP1CA-210ENST00000542876 APBB3O95704 486 aa18.6■□□□□ 0.57
PPP1CA-210ENST00000542876 DLATP10515 647 aaKnown RBP18.6■□□□□ 0.57
PPP1CA-210ENST00000542876 PFKLP17858 780 aa18.6■□□□□ 0.57
PPP1CA-210ENST00000542876 RAP1GAPP47736 663 aa18.6■□□□□ 0.57
PPP1CA-210ENST00000542876 SF3A2Q15428 464 aaKnown RBP18.6■□□□□ 0.57
PPP1CA-210ENST00000542876 ELF2Q15723 593 aa18.6■□□□□ 0.57
PPP1CA-210ENST00000542876 SNRNP35Q16560 246 aaKnown RBP18.6■□□□□ 0.57
PPP1CA-210ENST00000542876 NAIF1Q69YI7 327 aaPredicted RBP18.6■□□□□ 0.57
PPP1CA-210ENST00000542876 TRAPPC11Q7Z392 1133 aa18.6■□□□□ 0.57
PPP1CA-210ENST00000542876 LIMS2Q7Z4I7 341 aa18.6■□□□□ 0.57
PPP1CA-210ENST00000542876 IQUBQ8NA54 791 aa18.6■□□□□ 0.57
PPP1CA-210ENST00000542876 LINC00301Q8NCQ3 95 aa18.6■□□□□ 0.57
PPP1CA-210ENST00000542876 GLIS3Q8NEA6 775 aa18.6■□□□□ 0.57
PPP1CA-210ENST00000542876 ZNF396Q96N95 335 aaPredicted RBP18.6■□□□□ 0.57
PPP1CA-210ENST00000542876 TRIM9Q9C026 710 aa18.6■□□□□ 0.57
PPP1CA-210ENST00000542876 CRTAC1Q9NQ79 661 aa18.6■□□□□ 0.57
PPP1CA-210ENST00000542876 KBTBD4Q9NVX7 518 aa18.6■□□□□ 0.57
PPP1CA-210ENST00000542876 PPP6R2O75170 966 aa18.59■□□□□ 0.57
PPP1CA-210ENST00000542876 TCF3P15923 654 aa18.59■□□□□ 0.57
PPP1CA-210ENST00000542876 GNL1P36915 607 aaPredicted RBP18.59■□□□□ 0.57
PPP1CA-210ENST00000542876 PPP3CCP48454 512 aa18.59■□□□□ 0.57
PPP1CA-210ENST00000542876 LIMK1P53667 647 aa18.59■□□□□ 0.57
PPP1CA-210ENST00000542876 TNNC1P63316 161 aa18.59■□□□□ 0.57
PPP1CA-210ENST00000542876 DMC1Q14565 340 aa18.59■□□□□ 0.57
PPP1CA-210ENST00000542876 CCDC6Q16204 474 aa18.59■□□□□ 0.57
PPP1CA-210ENST00000542876 FAM26FQ5R3K3 315 aa18.59■□□□□ 0.57
PPP1CA-210ENST00000542876 HS2ST1Q7LGA3 356 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms