RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 A0A0G2JLL6 359 aaPredicted RBP4.43□□□□□ -1.7
SFSWAP-211ENST00000542813 LOC102723971A0A1B0GUV8 181 aa4.43□□□□□ -1.7
SFSWAP-211ENST00000542813 OR14I1A6ND48 311 aa4.43□□□□□ -1.7
SFSWAP-211ENST00000542813 SYNDIG1LA6NDD5 238 aa4.43□□□□□ -1.7
SFSWAP-211ENST00000542813 ZNF785A8K8V0 405 aa4.43□□□□□ -1.7
SFSWAP-211ENST00000542813 PCDH17O14917 1159 aa4.43□□□□□ -1.7
SFSWAP-211ENST00000542813 KIAA0391O15091 583 aaKnown RBP4.43□□□□□ -1.7
SFSWAP-211ENST00000542813 DNPH1O43598 174 aa4.43□□□□□ -1.7
SFSWAP-211ENST00000542813 SLC43A1O75387 559 aa4.43□□□□□ -1.7
SFSWAP-211ENST00000542813 ANXA1P04083 346 aa4.43□□□□□ -1.7
SFSWAP-211ENST00000542813 PRKCBP05771 671 aa4.43□□□□□ -1.7
SFSWAP-211ENST00000542813 CYP2C8P10632 490 aa4.43□□□□□ -1.7
SFSWAP-211ENST00000542813 MYCLP12524 364 aaPredicted RBP4.43□□□□□ -1.7
SFSWAP-211ENST00000542813 ATICP31939 592 aa4.43□□□□□ -1.7
SFSWAP-211ENST00000542813 CPT1AP50416 773 aa4.43□□□□□ -1.7
SFSWAP-211ENST00000542813 ARHGEF7Q14155 803 aa4.43□□□□□ -1.7
SFSWAP-211ENST00000542813 EIF4HQ15056 248 aaKnown RBP4.43□□□□□ -1.7
SFSWAP-211ENST00000542813 TSTQ16762 297 aaKnown RBP4.43□□□□□ -1.7
SFSWAP-211ENST00000542813 FAXCQ5TGI0 409 aa4.43□□□□□ -1.7
SFSWAP-211ENST00000542813 OTUD7BQ6GQQ9 843 aa4.43□□□□□ -1.7
SFSWAP-211ENST00000542813 MRNIPQ6NTE8 343 aa4.43□□□□□ -1.7
SFSWAP-211ENST00000542813 TMCO3Q6UWJ1 677 aa4.43□□□□□ -1.7
SFSWAP-211ENST00000542813 CCDC129Q6ZRS4 1044 aa4.43□□□□□ -1.7
SFSWAP-211ENST00000542813 BBS12Q6ZW61 710 aa4.43□□□□□ -1.7
SFSWAP-211ENST00000542813 ZNF365Q70YC5 407 aa4.43□□□□□ -1.7
SFSWAP-211ENST00000542813 RRAGAQ7L523 313 aa4.43□□□□□ -1.7
SFSWAP-211ENST00000542813 ENOSF1Q7L5Y1 443 aa4.43□□□□□ -1.7
SFSWAP-211ENST00000542813 PDSS2Q86YH6 399 aa4.43□□□□□ -1.7
SFSWAP-211ENST00000542813 RTKN2Q8IZC4 609 aa4.43□□□□□ -1.7
SFSWAP-211ENST00000542813 ZDHHC14Q8IZN3 488 aa4.43□□□□□ -1.7
SFSWAP-211ENST00000542813 TMEM57Q8N5G2 664 aa4.43□□□□□ -1.7
SFSWAP-211ENST00000542813 AOPEPQ8N6M6 819 aa4.43□□□□□ -1.7
SFSWAP-211ENST00000542813 CSGALNACT1Q8TDX6 532 aa4.43□□□□□ -1.7
SFSWAP-211ENST00000542813 SMCR8Q8TEV9 937 aaPredicted RBP4.43□□□□□ -1.7
SFSWAP-211ENST00000542813 DDX17Q92841 729 aaKnown RBP4.43□□□□□ -1.7
SFSWAP-211ENST00000542813 PPP1R9BQ96SB3 815 aa4.43□□□□□ -1.7
SFSWAP-211ENST00000542813 MYOCQ99972 504 aa4.43□□□□□ -1.7
SFSWAP-211ENST00000542813 SGPP1Q9BX95 441 aa4.43□□□□□ -1.7
SFSWAP-211ENST00000542813 CPEB1Q9BZB8 566 aaKnown RBP4.43□□□□□ -1.7
SFSWAP-211ENST00000542813 TWSG1Q9GZX9 223 aa4.43□□□□□ -1.7
SFSWAP-211ENST00000542813 ALDH8A1Q9H2A2 487 aaPredicted RBP4.43□□□□□ -1.7
SFSWAP-211ENST00000542813 CCDC68Q9H2F9 335 aa4.43□□□□□ -1.7
SFSWAP-211ENST00000542813 SH3GLB2Q9NR46 395 aa4.43□□□□□ -1.7
SFSWAP-211ENST00000542813 SLC23A1Q9UHI7 598 aa4.43□□□□□ -1.7
SFSWAP-211ENST00000542813 TBX20Q9UMR3 447 aa4.43□□□□□ -1.7
SFSWAP-211ENST00000542813 DTNAQ9Y4J8 743 aa4.43□□□□□ -1.7
SFSWAP-211ENST00000542813 ABCA5Q8WWZ7 1642 aa4.43□□□□□ -1.7
SFSWAP-211ENST00000542813 TCRBV7S2A1N4TA0A589 114 aa4.42□□□□□ -1.7
SFSWAP-211ENST00000542813 PI4KAP2A4QPH2 592 aa4.42□□□□□ -1.7
SFSWAP-211ENST00000542813 B4DLN1 442 aa4.42□□□□□ -1.7
SFSWAP-211ENST00000542813 M0QYG6 137 aa4.42□□□□□ -1.7
SFSWAP-211ENST00000542813 HRKO00198 91 aa4.42□□□□□ -1.7
SFSWAP-211ENST00000542813 CCP110O43303 1012 aa4.42□□□□□ -1.7
SFSWAP-211ENST00000542813 DOK2O60496 412 aa4.42□□□□□ -1.7
SFSWAP-211ENST00000542813 FOXD2O60548 495 aaPredicted RBP4.42□□□□□ -1.7
SFSWAP-211ENST00000542813 COQ9O75208 318 aa4.42□□□□□ -1.7
SFSWAP-211ENST00000542813 TMEM63AO94886 807 aa4.42□□□□□ -1.7
SFSWAP-211ENST00000542813 HMGCRP04035 888 aa4.42□□□□□ -1.7
SFSWAP-211ENST00000542813 CHGBP05060 677 aa4.42□□□□□ -1.7
SFSWAP-211ENST00000542813 PIM1P11309 404 aaPredicted RBP4.42□□□□□ -1.7
SFSWAP-211ENST00000542813 NCAM1P13591 858 aa4.42□□□□□ -1.7
SFSWAP-211ENST00000542813 TPH1P17752 444 aa4.42□□□□□ -1.7
SFSWAP-211ENST00000542813 ATP5JP18859 108 aa4.42□□□□□ -1.7
SFSWAP-211ENST00000542813 CHMP24386 653 aa4.42□□□□□ -1.7
SFSWAP-211ENST00000542813 MST1P26927 711 aa4.42□□□□□ -1.7
SFSWAP-211ENST00000542813 GALNSP34059 522 aa4.42□□□□□ -1.7
SFSWAP-211ENST00000542813 STAT1P42224 750 aa4.42□□□□□ -1.7
SFSWAP-211ENST00000542813 KIR2DL3P43628 341 aa4.42□□□□□ -1.7
SFSWAP-211ENST00000542813 NPTX2P47972 431 aa4.42□□□□□ -1.7
SFSWAP-211ENST00000542813 POLD2P49005 469 aa4.42□□□□□ -1.7
SFSWAP-211ENST00000542813 ZNF135P52742 658 aaPredicted RBP4.42□□□□□ -1.7
SFSWAP-211ENST00000542813 ITGA1P56199 1179 aa4.42□□□□□ -1.7
SFSWAP-211ENST00000542813 ADAM15Q13444 863 aa4.42□□□□□ -1.7
SFSWAP-211ENST00000542813 SMAD4Q13485 552 aaKnown RBP4.42□□□□□ -1.7
SFSWAP-211ENST00000542813 ERV3-1Q14264 604 aa4.42□□□□□ -1.7
SFSWAP-211ENST00000542813 NFIXQ14938 502 aa4.42□□□□□ -1.7
SFSWAP-211ENST00000542813 RTP5Q14D33 572 aa4.42□□□□□ -1.7
SFSWAP-211ENST00000542813 AMOTQ4VCS5 1084 aa4.42□□□□□ -1.7
SFSWAP-211ENST00000542813 CRB2Q5IJ48 1285 aa4.42□□□□□ -1.7
SFSWAP-211ENST00000542813 CFAP58Q5T655 872 aa4.42□□□□□ -1.7
SFSWAP-211ENST00000542813 SLC9C2Q5TAH2 1124 aa4.42□□□□□ -1.7
SFSWAP-211ENST00000542813 MFSD4BQ5TF39 518 aa4.42□□□□□ -1.7
SFSWAP-211ENST00000542813 PLAG1Q6DJT9 500 aa4.42□□□□□ -1.7
SFSWAP-211ENST00000542813 SEM1Q6ZVN7 128 aa4.42□□□□□ -1.7
SFSWAP-211ENST00000542813 RAB11FIP2Q7L804 512 aa4.42□□□□□ -1.7
SFSWAP-211ENST00000542813 USP37Q86T82 979 aa4.42□□□□□ -1.7
SFSWAP-211ENST00000542813 PLA2G15Q8NCC3 412 aa4.42□□□□□ -1.7
SFSWAP-211ENST00000542813 CPT1CQ8TCG5 803 aa4.42□□□□□ -1.7
SFSWAP-211ENST00000542813 RSC1A1Q92681 617 aa4.42□□□□□ -1.7
SFSWAP-211ENST00000542813 GOLGA1Q92805 767 aa4.42□□□□□ -1.7
SFSWAP-211ENST00000542813 C3orf49Q96BT1 292 aa4.42□□□□□ -1.7
SFSWAP-211ENST00000542813 SYT3Q9BQG1 590 aa4.42□□□□□ -1.7
SFSWAP-211ENST00000542813 TINAGL1Q9GZM7 467 aaPredicted RBP4.42□□□□□ -1.7
SFSWAP-211ENST00000542813 KATNBL1Q9H079 304 aa4.42□□□□□ -1.7
SFSWAP-211ENST00000542813 RNPEPQ9H4A4 650 aa4.42□□□□□ -1.7
SFSWAP-211ENST00000542813 EPS8L2Q9H6S3 715 aa4.42□□□□□ -1.7
SFSWAP-211ENST00000542813 GPR35Q9HC97 309 aa4.42□□□□□ -1.7
SFSWAP-211ENST00000542813 JKAMPQ9P055 326 aa4.42□□□□□ -1.7
SFSWAP-211ENST00000542813 PI4KBQ9UBF8 816 aa4.42□□□□□ -1.7
SFSWAP-211ENST00000542813 XPR1Q9UBH6 696 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms