RNA–Protein interactions for RNA: ENST00000542772.1

ABCF1-207, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 223 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-207ENST00000542772 ATAD1Q8NBU5 361 aa6.22□□□□□ -1.41
ABCF1-207ENST00000542772 KREMEN2Q8NCW0 462 aa6.22□□□□□ -1.41
ABCF1-207ENST00000542772 SLC2A14Q8TDB8 520 aa6.22□□□□□ -1.41
ABCF1-207ENST00000542772 GDPD5Q8WTR4 605 aa6.22□□□□□ -1.41
ABCF1-207ENST00000542772 VCPIP1Q96JH7 1222 aa6.22□□□□□ -1.41
ABCF1-207ENST00000542772 SPATA17Q96L03 361 aa6.22□□□□□ -1.41
ABCF1-207ENST00000542772 HSFY1Q96LI6 401 aa6.22□□□□□ -1.41
ABCF1-207ENST00000542772 KCNK16Q96T55 309 aa6.22□□□□□ -1.41
ABCF1-207ENST00000542772 PCDHB18PQ96TA0 734 aa6.22□□□□□ -1.41
ABCF1-207ENST00000542772 SMOQ99835 787 aa6.22□□□□□ -1.41
ABCF1-207ENST00000542772 SLC4A5Q9BY07 1137 aa6.22□□□□□ -1.41
ABCF1-207ENST00000542772 ISCUQ9H1K1 167 aa6.22□□□□□ -1.41
ABCF1-207ENST00000542772 CRISPLD1Q9H336 500 aa6.22□□□□□ -1.41
ABCF1-207ENST00000542772 PRDM12Q9H4Q4 367 aa6.22□□□□□ -1.41
ABCF1-207ENST00000542772 NSUN3Q9H649 340 aaKnown RBP6.22□□□□□ -1.41
ABCF1-207ENST00000542772 TLE6Q9H808 572 aa6.22□□□□□ -1.41
ABCF1-207ENST00000542772 CYLDQ9NQC7 956 aa6.22□□□□□ -1.41
ABCF1-207ENST00000542772 TMEM30AQ9NV96 361 aa6.22□□□□□ -1.41
ABCF1-207ENST00000542772 DPP7Q9UHL4 492 aa6.22□□□□□ -1.41
ABCF1-207ENST00000542772 FBXW11Q9UKB1 542 aa6.22□□□□□ -1.41
ABCF1-207ENST00000542772 TSPAN16Q9UKR8 245 aa6.22□□□□□ -1.41
ABCF1-207ENST00000542772 NENFQ9UMX5 172 aa6.22□□□□□ -1.41
ABCF1-207ENST00000542772 PCDHGC5Q9Y5F6 944 aa6.22□□□□□ -1.41
ABCF1-207ENST00000542772 HCFC2Q9Y5Z7 792 aa6.22□□□□□ -1.41
ABCF1-207ENST00000542772 USP3Q9Y6I4 520 aa6.22□□□□□ -1.41
ABCF1-207ENST00000542772 GREB1Q4ZG55 1949 aa6.22□□□□□ -1.41
ABCF1-207ENST00000542772 REV3LO60673 3130 aa6.22□□□□□ -1.41
ABCF1-207ENST00000542772 PLXNA3P51805 1871 aa6.22□□□□□ -1.41
ABCF1-207ENST00000542772 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.21□□□□□ -1.42
ABCF1-207ENST00000542772 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.21□□□□□ -1.42
ABCF1-207ENST00000542772 DDX3XO00571 662 aaKnown RBP eCLIP6.21□□□□□ -1.42
ABCF1-207ENST00000542772 XPO1O14980 1071 aaKnown RBP6.21□□□□□ -1.42
ABCF1-207ENST00000542772 THAP12O43422 761 aa6.21□□□□□ -1.42
ABCF1-207ENST00000542772 ZMYND10O75800 440 aa6.21□□□□□ -1.42
ABCF1-207ENST00000542772 GABBR2O75899 941 aa6.21□□□□□ -1.42
ABCF1-207ENST00000542772 MICAL2O94851 1124 aa6.21□□□□□ -1.42
ABCF1-207ENST00000542772 GLUD1P00367 558 aa6.21□□□□□ -1.42
ABCF1-207ENST00000542772 CALCAP01258 141 aa6.21□□□□□ -1.42
ABCF1-207ENST00000542772 MMEP08473 750 aa6.21□□□□□ -1.42
ABCF1-207ENST00000542772 CCDC130P13994 396 aa6.21□□□□□ -1.42
ABCF1-207ENST00000542772 CPB1P15086 417 aa6.21□□□□□ -1.42
ABCF1-207ENST00000542772 CD19P15391 556 aa6.21□□□□□ -1.42
ABCF1-207ENST00000542772 NPR3P17342 541 aa6.21□□□□□ -1.42
ABCF1-207ENST00000542772 TNFAIP3P21580 790 aa6.21□□□□□ -1.42
ABCF1-207ENST00000542772 BRD2P25440 801 aaKnown RBP6.21□□□□□ -1.42
ABCF1-207ENST00000542772 HOXA9P31269 272 aa6.21□□□□□ -1.42
ABCF1-207ENST00000542772 PDE6CP51160 858 aa6.21□□□□□ -1.42
ABCF1-207ENST00000542772 CACNA2D1P54289 1103 aa6.21□□□□□ -1.42
ABCF1-207ENST00000542772 ARPP19P56211 112 aa6.21□□□□□ -1.42
ABCF1-207ENST00000542772 RPL10AP62906 217 aaKnown RBP6.21□□□□□ -1.42
ABCF1-207ENST00000542772 CYP27A1Q02318 531 aa6.21□□□□□ -1.42
ABCF1-207ENST00000542772 PDE4CQ08493 712 aa6.21□□□□□ -1.42
ABCF1-207ENST00000542772 GOLGA8FQ08AF8 430 aa6.21□□□□□ -1.42
ABCF1-207ENST00000542772 GOLGA8DPQ0D2H9 430 aa6.21□□□□□ -1.42
ABCF1-207ENST00000542772 KLHL30Q0D2K2 578 aa6.21□□□□□ -1.42
ABCF1-207ENST00000542772 HYAL1Q12794 435 aa6.21□□□□□ -1.42
ABCF1-207ENST00000542772 ORC1Q13415 861 aa6.21□□□□□ -1.42
ABCF1-207ENST00000542772 ASIC2Q16515 512 aa6.21□□□□□ -1.42
ABCF1-207ENST00000542772 CCDC142Q17RM4 750 aa6.21□□□□□ -1.42
ABCF1-207ENST00000542772 TSR1Q2NL82 804 aaKnown RBP6.21□□□□□ -1.42
ABCF1-207ENST00000542772 PM20D1Q6GTS8 502 aa6.21□□□□□ -1.42
ABCF1-207ENST00000542772 ACAD10Q6JQN1 1059 aa6.21□□□□□ -1.42
ABCF1-207ENST00000542772 PPP1R2P3Q6NXS1 205 aa6.21□□□□□ -1.42
ABCF1-207ENST00000542772 PMF1Q6P1K2 205 aa6.21□□□□□ -1.42
ABCF1-207ENST00000542772 CYP26C1Q6V0L0 522 aa6.21□□□□□ -1.42
ABCF1-207ENST00000542772 TRIM72Q6ZMU5 477 aa6.21□□□□□ -1.42
ABCF1-207ENST00000542772 CCDC149Q6ZUS6 474 aa6.21□□□□□ -1.42
ABCF1-207ENST00000542772 FAM35AQ86V20 835 aa6.21□□□□□ -1.42
ABCF1-207ENST00000542772 TMTC1Q8IUR5 882 aa6.21□□□□□ -1.42
ABCF1-207ENST00000542772 CCDC170Q8IYT3 715 aa6.21□□□□□ -1.42
ABCF1-207ENST00000542772 ZNF276Q8N554 614 aa6.21□□□□□ -1.42
ABCF1-207ENST00000542772 SPC24Q8NBT2 197 aa6.21□□□□□ -1.42
ABCF1-207ENST00000542772 CMASQ8NFW8 434 aaPredicted RBP6.21□□□□□ -1.42
ABCF1-207ENST00000542772 UBA3Q8TBC4 463 aa6.21□□□□□ -1.42
ABCF1-207ENST00000542772 ANP32BQ92688 251 aaKnown RBP6.21□□□□□ -1.42
ABCF1-207ENST00000542772 PPP2R3CQ969Q6 453 aa6.21□□□□□ -1.42
ABCF1-207ENST00000542772 MYLPFQ96A32 169 aa6.21□□□□□ -1.42
ABCF1-207ENST00000542772 SMARCD1Q96GM5 515 aa6.21□□□□□ -1.42
ABCF1-207ENST00000542772 MYRFLQ96LU7 910 aa6.21□□□□□ -1.42
ABCF1-207ENST00000542772 TTLL2Q9BWV7 592 aa6.21□□□□□ -1.42
ABCF1-207ENST00000542772 LRRC3Q9BY71 257 aa6.21□□□□□ -1.42
ABCF1-207ENST00000542772 ZNHIT6Q9NWK9 470 aaKnown RBP6.21□□□□□ -1.42
ABCF1-207ENST00000542772 MTMR10Q9NXD2 777 aa6.21□□□□□ -1.42
ABCF1-207ENST00000542772 ZDHHC7Q9NXF8 308 aa6.21□□□□□ -1.42
ABCF1-207ENST00000542772 HESX1Q9UBX0 185 aa6.21□□□□□ -1.42
ABCF1-207ENST00000542772 CYTH4Q9UIA0 394 aa6.21□□□□□ -1.42
ABCF1-207ENST00000542772 SLC27A5Q9Y2P5 690 aa6.21□□□□□ -1.42
ABCF1-207ENST00000542772 ASB3Q9Y575 518 aa6.21□□□□□ -1.42
ABCF1-207ENST00000542772 MYO9BQ13459 2157 aa6.21□□□□□ -1.42
ABCF1-207ENST00000542772 TRIOBPQ9H2D6 2365 aa6.2□□□□□ -1.42
ABCF1-207ENST00000542772 MYO7AQ13402 2215 aa6.2□□□□□ -1.42
ABCF1-207ENST00000542772 A0A087X0T9 212 aa6.2□□□□□ -1.42
ABCF1-207ENST00000542772 SOBPA7XYQ1 873 aa6.2□□□□□ -1.42
ABCF1-207ENST00000542772 GOLGA6L6A8MZA4 724 aa6.2□□□□□ -1.42
ABCF1-207ENST00000542772 EIF3CLB5ME19 914 aaKnown RBP6.2□□□□□ -1.42
ABCF1-207ENST00000542772 TULP2O00295 520 aa6.2□□□□□ -1.42
ABCF1-207ENST00000542772 TRIM66O15016 1216 aa6.2□□□□□ -1.42
ABCF1-207ENST00000542772 RTN2O75298 545 aa6.2□□□□□ -1.42
ABCF1-207ENST00000542772 AP1G2O75843 785 aa6.2□□□□□ -1.42
ABCF1-207ENST00000542772 CLSTN1O94985 981 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms