RNA–Protein interactions for RNA: ENST00000542029.1

VTN-203, Transcript of vitronectin, humanhuman

TSL 3

Gene VTN, Length 501 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-203ENST00000542029 KIAA1958Q8N8K9 716 aa12.17□□□□□ -0.46
VTN-203ENST00000542029 OR6B3Q8NGW1 331 aa12.17□□□□□ -0.46
VTN-203ENST00000542029 CCDC26Q8TAB7 109 aa12.17□□□□□ -0.46
VTN-203ENST00000542029 MYLPFQ96A32 169 aa12.17□□□□□ -0.46
VTN-203ENST00000542029 FAM84AQ96KN4 292 aa12.17□□□□□ -0.46
VTN-203ENST00000542029 VRTNQ9H8Y1 702 aa12.17□□□□□ -0.46
VTN-203ENST00000542029 SMG5Q9UPR3 1016 aaKnown RBP12.17□□□□□ -0.46
VTN-203ENST00000542029 MYH15Q9Y2K3 1946 aa12.17□□□□□ -0.46
VTN-203ENST00000542029 VPS13AQ96RL7 3174 aa12.16□□□□□ -0.46
VTN-203ENST00000542029 TRDMT1O14717 391 aaKnown RBP12.16□□□□□ -0.46
VTN-203ENST00000542029 ACTN4O43707 911 aaKnown RBP12.16□□□□□ -0.46
VTN-203ENST00000542029 CST3P01034 146 aaPredicted RBP12.16□□□□□ -0.46
VTN-203ENST00000542029 CKMP06732 381 aa12.16□□□□□ -0.46
VTN-203ENST00000542029 PDGFRBP09619 1106 aa12.16□□□□□ -0.46
VTN-203ENST00000542029 TCF3P15923 654 aa12.16□□□□□ -0.46
VTN-203ENST00000542029 BDNFP23560 247 aa12.16□□□□□ -0.46
VTN-203ENST00000542029 PSMC1P62191 440 aaKnown RBP12.16□□□□□ -0.46
VTN-203ENST00000542029 SATB1Q01826 763 aa12.16□□□□□ -0.46
VTN-203ENST00000542029 CYP27A1Q02318 531 aa12.16□□□□□ -0.46
VTN-203ENST00000542029 NR1H3Q13133 447 aa12.16□□□□□ -0.46
VTN-203ENST00000542029 BIRC3Q13489 604 aa12.16□□□□□ -0.46
VTN-203ENST00000542029 PUM1Q14671 1186 aaKnown RBP eCLIP12.16□□□□□ -0.46
VTN-203ENST00000542029 KCNB1Q14721 858 aa12.16□□□□□ -0.46
VTN-203ENST00000542029 MTF1Q14872 753 aa12.16□□□□□ -0.46
VTN-203ENST00000542029 PON2Q15165 354 aa12.16□□□□□ -0.46
VTN-203ENST00000542029 FBXO43Q4G163 708 aa12.16□□□□□ -0.46
VTN-203ENST00000542029 SCARA3Q6AZY7 606 aa12.16□□□□□ -0.46
VTN-203ENST00000542029 KIAA2013Q8IYS2 634 aa12.16□□□□□ -0.46
VTN-203ENST00000542029 CPA6Q8N4T0 437 aa12.16□□□□□ -0.46
VTN-203ENST00000542029 OSCP1Q8WVF1 389 aa12.16□□□□□ -0.46
VTN-203ENST00000542029 PAGE5Q96GU1 130 aa12.16□□□□□ -0.46
VTN-203ENST00000542029 CCDC34Q96HJ3 373 aa12.16□□□□□ -0.46
VTN-203ENST00000542029 PCED1BQ96HM7 432 aa12.16□□□□□ -0.46
VTN-203ENST00000542029 SPATA32Q96LK8 384 aa12.16□□□□□ -0.46
VTN-203ENST00000542029 C8orf48Q96LL4 319 aa12.16□□□□□ -0.46
VTN-203ENST00000542029 ELOVL4Q9GZR5 314 aa12.16□□□□□ -0.46
VTN-203ENST00000542029 SMG9Q9H0W8 520 aaKnown RBP12.16□□□□□ -0.46
VTN-203ENST00000542029 TRPC7Q9HCX4 862 aa12.16□□□□□ -0.46
VTN-203ENST00000542029 CRTAC1Q9NQ79 661 aa12.16□□□□□ -0.46
VTN-203ENST00000542029 TRPM5Q9NZQ8 1165 aa12.16□□□□□ -0.46
VTN-203ENST00000542029 SERTAD1Q9UHV2 236 aa12.16□□□□□ -0.46
VTN-203ENST00000542029 CCL26Q9Y258 94 aa12.16□□□□□ -0.46
VTN-203ENST00000542029 SCN1AP35498 2009 aa12.16□□□□□ -0.46
VTN-203ENST00000542029 ATP8B3O60423 1300 aa12.15□□□□□ -0.46
VTN-203ENST00000542029 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.15□□□□□ -0.46
VTN-203ENST00000542029 A8MXQ7 604 aa12.15□□□□□ -0.46
VTN-203ENST00000542029 PDXKO00764 312 aa12.15□□□□□ -0.46
VTN-203ENST00000542029 ATP2C2O75185 946 aa12.15□□□□□ -0.46
VTN-203ENST00000542029 TADA3O75528 432 aa12.15□□□□□ -0.46
VTN-203ENST00000542029 RPN1P04843 607 aaKnown RBP12.15□□□□□ -0.46
VTN-203ENST00000542029 P4HA1P13674 534 aa12.15□□□□□ -0.46
VTN-203ENST00000542029 PTPN1P18031 435 aaKnown RBP12.15□□□□□ -0.46
VTN-203ENST00000542029 HDCP19113 662 aa12.15□□□□□ -0.46
VTN-203ENST00000542029 DRD1P21728 446 aa12.15□□□□□ -0.46
VTN-203ENST00000542029 CASP1P29466 404 aa12.15□□□□□ -0.46
VTN-203ENST00000542029 IFNAR2P48551 515 aa12.15□□□□□ -0.46
VTN-203ENST00000542029 NOP14P78316 857 aaKnown RBP12.15□□□□□ -0.46
VTN-203ENST00000542029 CLDN10P78369 228 aa12.15□□□□□ -0.46
VTN-203ENST00000542029 STK4Q13043 487 aa12.15□□□□□ -0.46
VTN-203ENST00000542029 PKP1Q13835 747 aa12.15□□□□□ -0.46
VTN-203ENST00000542029 GAS6Q14393 721 aa12.15□□□□□ -0.46
VTN-203ENST00000542029 ZNF667Q5HYK9 610 aa12.15□□□□□ -0.46
VTN-203ENST00000542029 TMEM196Q5HYL7 178 aa12.15□□□□□ -0.46
VTN-203ENST00000542029 LONP2Q86WA8 852 aa12.15□□□□□ -0.46
VTN-203ENST00000542029 TTC8Q8TAM2 541 aa12.15□□□□□ -0.46
VTN-203ENST00000542029 PARD3BQ8TEW8 1205 aa12.15□□□□□ -0.46
VTN-203ENST00000542029 ATP2A3Q93084 1043 aa12.15□□□□□ -0.46
VTN-203ENST00000542029 TNIP3Q96KP6 325 aa12.15□□□□□ -0.46
VTN-203ENST00000542029 SLITRK1Q96PX8 696 aa12.15□□□□□ -0.46
VTN-203ENST00000542029 MRPL45Q9BRJ2 306 aaKnown RBP12.15□□□□□ -0.46
VTN-203ENST00000542029 TTLL2Q9BWV7 592 aa12.15□□□□□ -0.46
VTN-203ENST00000542029 SCAND2PQ9GZW5 306 aaPredicted RBP12.15□□□□□ -0.46
VTN-203ENST00000542029 XYLT2Q9H1B5 865 aa12.15□□□□□ -0.46
VTN-203ENST00000542029 EBF3Q9H4W6 596 aa12.15□□□□□ -0.46
VTN-203ENST00000542029 HPS4Q9NQG7 708 aa12.15□□□□□ -0.46
VTN-203ENST00000542029 RBM12Q9NTZ6 932 aaKnown RBP12.15□□□□□ -0.46
VTN-203ENST00000542029 DMAC2Q9NW81 257 aa12.15□□□□□ -0.46
VTN-203ENST00000542029 DUS2Q9NX74 493 aaKnown RBP12.15□□□□□ -0.46
VTN-203ENST00000542029 GCNT4Q9P109 453 aa12.15□□□□□ -0.46
VTN-203ENST00000542029 NXF1Q9UBU9 619 aaKnown RBP12.15□□□□□ -0.46
VTN-203ENST00000542029 ARHGAP26Q9UNA1 814 aa12.15□□□□□ -0.46
VTN-203ENST00000542029 CCDC163A0A0D9SF12 145 aa12.14□□□□□ -0.47
VTN-203ENST00000542029 PRR5-ARHGAP8B1AHC4 643 aa12.14□□□□□ -0.47
VTN-203ENST00000542029 IKBKBO14920 756 aa12.14□□□□□ -0.47
VTN-203ENST00000542029 HCRTO43612 131 aa12.14□□□□□ -0.47
VTN-203ENST00000542029 KLRC4O43908 158 aa12.14□□□□□ -0.47
VTN-203ENST00000542029 LRP3O75074 770 aa12.14□□□□□ -0.47
VTN-203ENST00000542029 PFKFB1P16118 471 aa12.14□□□□□ -0.47
VTN-203ENST00000542029 TRIM21P19474 475 aaKnown RBP12.14□□□□□ -0.47
VTN-203ENST00000542029 SYKP43405 635 aa12.14□□□□□ -0.47
VTN-203ENST00000542029 MYL6P60660 151 aa12.14□□□□□ -0.47
VTN-203ENST00000542029 ARHGAP8P85298 464 aa12.14□□□□□ -0.47
VTN-203ENST00000542029 LMNB2Q03252 620 aa12.14□□□□□ -0.47
VTN-203ENST00000542029 USP4Q13107 963 aa12.14□□□□□ -0.47
VTN-203ENST00000542029 ZNF77Q15935 545 aa12.14□□□□□ -0.47
VTN-203ENST00000542029 CCDC142Q17RM4 750 aa12.14□□□□□ -0.47
VTN-203ENST00000542029 ZNF699Q32M78 642 aa12.14□□□□□ -0.47
VTN-203ENST00000542029 KMT5BQ4FZB7 885 aa12.14□□□□□ -0.47
VTN-203ENST00000542029 MDH1BQ5I0G3 518 aa12.14□□□□□ -0.47
VTN-203ENST00000542029 TDRD10Q5VZ19 366 aaKnown RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms