RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-218ENST00000541615 CREG2Q8IUH2 290 aa5.41□□□□□ -1.54
SNHG1-218ENST00000541615 LRRC34Q8IZ02 419 aa5.41□□□□□ -1.54
SNHG1-218ENST00000541615 ADGRF2Q8IZF7 708 aa5.41□□□□□ -1.54
SNHG1-218ENST00000541615 LINC00518Q8N0U6 118 aa5.41□□□□□ -1.54
SNHG1-218ENST00000541615 LIX1Q8N485 282 aa5.41□□□□□ -1.54
SNHG1-218ENST00000541615 MARVELD2Q8N4S9 558 aa5.41□□□□□ -1.54
SNHG1-218ENST00000541615 FAM160A2Q8N612 972 aaPredicted RBP5.41□□□□□ -1.54
SNHG1-218ENST00000541615 MAGEB6Q8N7X4 407 aa5.41□□□□□ -1.54
SNHG1-218ENST00000541615 DNAAF3Q8N9W5 541 aa5.41□□□□□ -1.54
SNHG1-218ENST00000541615 ZNF420Q8TAQ5 688 aaPredicted RBP5.41□□□□□ -1.54
SNHG1-218ENST00000541615 TGFBRAP1Q8WUH2 860 aa5.41□□□□□ -1.54
SNHG1-218ENST00000541615 MYDGFQ969H8 173 aa5.41□□□□□ -1.54
SNHG1-218ENST00000541615 RELTQ969Z4 430 aa5.41□□□□□ -1.54
SNHG1-218ENST00000541615 ATP6V1E2Q96A05 226 aa5.41□□□□□ -1.54
SNHG1-218ENST00000541615 DACT3Q96B18 629 aaPredicted RBP5.41□□□□□ -1.54
SNHG1-218ENST00000541615 SLC47A1Q96FL8 570 aa5.41□□□□□ -1.54
SNHG1-218ENST00000541615 FERD3LQ96RJ6 166 aa5.41□□□□□ -1.54
SNHG1-218ENST00000541615 TWNKQ96RR1 684 aa5.41□□□□□ -1.54
SNHG1-218ENST00000541615 TESK2Q96S53 571 aa5.41□□□□□ -1.54
SNHG1-218ENST00000541615 RMDN3Q96TC7 470 aa5.41□□□□□ -1.54
SNHG1-218ENST00000541615 C1orf50Q9BV19 199 aa5.41□□□□□ -1.54
SNHG1-218ENST00000541615 TBC1D10AQ9BXI6 508 aa5.41□□□□□ -1.54
SNHG1-218ENST00000541615 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.41□□□□□ -1.54
SNHG1-218ENST00000541615 ROPN1BQ9BZX4 212 aaPredicted RBP5.41□□□□□ -1.54
SNHG1-218ENST00000541615 ZC3H12CQ9C0D7 883 aaKnown RBP5.41□□□□□ -1.54
SNHG1-218ENST00000541615 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.41□□□□□ -1.54
SNHG1-218ENST00000541615 LSG1Q9H089 658 aaKnown RBP5.41□□□□□ -1.54
SNHG1-218ENST00000541615 RBM38Q9H0Z9 239 aaKnown RBP5.41□□□□□ -1.54
SNHG1-218ENST00000541615 SLC6A15Q9H2J7 730 aa5.41□□□□□ -1.54
SNHG1-218ENST00000541615 PABPC3Q9H361 631 aaKnown RBP5.41□□□□□ -1.54
SNHG1-218ENST00000541615 LRRC19Q9H756 370 aa5.41□□□□□ -1.54
SNHG1-218ENST00000541615 TRIM45Q9H8W5 580 aaPredicted RBP5.41□□□□□ -1.54
SNHG1-218ENST00000541615 ROPN1Q9HAT0 212 aaPredicted RBP5.41□□□□□ -1.54
SNHG1-218ENST00000541615 RAVER2Q9HCJ3 691 aaKnown RBP5.41□□□□□ -1.54
SNHG1-218ENST00000541615 ATP13A1Q9HD20 1204 aa5.41□□□□□ -1.54
SNHG1-218ENST00000541615 RRP7BPQ9NSQ0 103 aa5.41□□□□□ -1.54
SNHG1-218ENST00000541615 TAS2R1Q9NYW7 299 aa5.41□□□□□ -1.54
SNHG1-218ENST00000541615 IL37Q9NZH6 218 aa5.41□□□□□ -1.54
SNHG1-218ENST00000541615 DTLQ9NZJ0 730 aa5.41□□□□□ -1.54
SNHG1-218ENST00000541615 EHD3Q9NZN3 535 aa5.41□□□□□ -1.54
SNHG1-218ENST00000541615 SENP1Q9P0U3 644 aa5.41□□□□□ -1.54
SNHG1-218ENST00000541615 LAMP5Q9UJQ1 280 aa5.41□□□□□ -1.54
SNHG1-218ENST00000541615 STOML2Q9UJZ1 356 aa5.41□□□□□ -1.54
SNHG1-218ENST00000541615 TLK1Q9UKI8 766 aa5.41□□□□□ -1.54
SNHG1-218ENST00000541615 CLEC4AQ9UMR7 237 aa5.41□□□□□ -1.54
SNHG1-218ENST00000541615 TNNQ9UQP3 1299 aa5.41□□□□□ -1.54
SNHG1-218ENST00000541615 POLHQ9Y253 713 aa5.41□□□□□ -1.54
SNHG1-218ENST00000541615 SLC27A5Q9Y2P5 690 aa5.41□□□□□ -1.54
SNHG1-218ENST00000541615 NFS1Q9Y697 457 aa5.41□□□□□ -1.54
SNHG1-218ENST00000541615 CACNG2Q9Y698 323 aa5.41□□□□□ -1.54
SNHG1-218ENST00000541615 URB2Q14146 1524 aaKnown RBP5.41□□□□□ -1.54
SNHG1-218ENST00000541615 ABCC4O15439 1325 aa5.41□□□□□ -1.54
SNHG1-218ENST00000541615 ZNF532Q9HCE3 1301 aa5.41□□□□□ -1.54
SNHG1-218ENST00000541615 KDM3AQ9Y4C1 1321 aa5.41□□□□□ -1.54
SNHG1-218ENST00000541615 TARBP1Q13395 1621 aaKnown RBP5.41□□□□□ -1.54
SNHG1-218ENST00000541615 ASXL2Q76L83 1435 aa5.4□□□□□ -1.54
SNHG1-218ENST00000541615 RIMS2Q9UQ26 1411 aa5.4□□□□□ -1.54
SNHG1-218ENST00000541615 TOPBP1Q92547 1522 aa5.4□□□□□ -1.54
SNHG1-218ENST00000541615 A6NJY4 79 aa5.4□□□□□ -1.54
SNHG1-218ENST00000541615 EIF4E1BA6NMX2 242 aaKnown RBP5.4□□□□□ -1.54
SNHG1-218ENST00000541615 A8MUI8 341 aa5.4□□□□□ -1.54
SNHG1-218ENST00000541615 K7ENM7 598 aa5.4□□□□□ -1.54
SNHG1-218ENST00000541615 DDX3XO00571 662 aaKnown RBP eCLIP5.4□□□□□ -1.54
SNHG1-218ENST00000541615 ITM2AO43736 263 aa5.4□□□□□ -1.54
SNHG1-218ENST00000541615 SSX5O60225 188 aa5.4□□□□□ -1.54
SNHG1-218ENST00000541615 EXOC3O60645 756 aa5.4□□□□□ -1.54
SNHG1-218ENST00000541615 ADAMTS2O95450 1211 aa5.4□□□□□ -1.54
SNHG1-218ENST00000541615 POP4O95707 220 aaKnown RBP5.4□□□□□ -1.54
SNHG1-218ENST00000541615 WDPCPO95876 746 aa5.4□□□□□ -1.54
SNHG1-218ENST00000541615 ATP1A1P05023 1023 aaKnown RBP5.4□□□□□ -1.54
SNHG1-218ENST00000541615 ATP5BP06576 529 aaKnown RBP5.4□□□□□ -1.54
SNHG1-218ENST00000541615 NR3C2P08235 984 aa5.4□□□□□ -1.54
SNHG1-218ENST00000541615 MYL3P08590 195 aa5.4□□□□□ -1.54
SNHG1-218ENST00000541615 NUDT17P0C025 328 aa5.4□□□□□ -1.54
SNHG1-218ENST00000541615 SLC2A3P11169 496 aa5.4□□□□□ -1.54
SNHG1-218ENST00000541615 CHN1P15882 459 aa5.4□□□□□ -1.54
SNHG1-218ENST00000541615 NPR1P16066 1061 aa5.4□□□□□ -1.54
SNHG1-218ENST00000541615 STMN1P16949 149 aa5.4□□□□□ -1.54
SNHG1-218ENST00000541615 PRKCAP17252 672 aa5.4□□□□□ -1.54
SNHG1-218ENST00000541615 NPR3P17342 541 aa5.4□□□□□ -1.54
SNHG1-218ENST00000541615 ITGB6P18564 788 aa5.4□□□□□ -1.54
SNHG1-218ENST00000541615 CDH2P19022 906 aaPredicted RBP5.4□□□□□ -1.54
SNHG1-218ENST00000541615 PRDX6P30041 224 aa5.4□□□□□ -1.54
SNHG1-218ENST00000541615 SHMT1P34896 483 aa5.4□□□□□ -1.54
SNHG1-218ENST00000541615 HTR7P34969 479 aa5.4□□□□□ -1.54
SNHG1-218ENST00000541615 TALDO1P37837 337 aa5.4□□□□□ -1.54
SNHG1-218ENST00000541615 AFMP43652 599 aa5.4□□□□□ -1.54
SNHG1-218ENST00000541615 STARP49675 285 aa5.4□□□□□ -1.54
SNHG1-218ENST00000541615 ADCY7P51828 1080 aa5.4□□□□□ -1.54
SNHG1-218ENST00000541615 CASP5P51878 434 aa5.4□□□□□ -1.54
SNHG1-218ENST00000541615 LIMK1P53667 647 aa5.4□□□□□ -1.54
SNHG1-218ENST00000541615 RCAN1P53805 252 aa5.4□□□□□ -1.54
SNHG1-218ENST00000541615 RHAGQ02094 409 aa5.4□□□□□ -1.54
SNHG1-218ENST00000541615 GHRHRQ02643 423 aa5.4□□□□□ -1.54
SNHG1-218ENST00000541615 TARDBPQ13148 414 aaKnown RBP eCLIP5.4□□□□□ -1.54
SNHG1-218ENST00000541615 AP3B2Q13367 1082 aa5.4□□□□□ -1.54
SNHG1-218ENST00000541615 ATP1A4Q13733 1029 aa5.4□□□□□ -1.54
SNHG1-218ENST00000541615 DHX34Q14147 1143 aaKnown RBP5.4□□□□□ -1.54
SNHG1-218ENST00000541615 PDK3Q15120 406 aa5.4□□□□□ -1.54
SNHG1-218ENST00000541615 SF3B4Q15427 424 aaKnown RBP eCLIP5.4□□□□□ -1.544e-47■■■■■ 46.5
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms