RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 BPIFB4P59827 614 aa8.95□□□□□ -0.98
CHD4-208ENST00000540960 FAM193AP78312 1265 aa8.95□□□□□ -0.98
CHD4-208ENST00000540960 SIM1P81133 766 aaPredicted RBP8.95□□□□□ -0.98
CHD4-208ENST00000540960 KCNC4Q03721 635 aa8.95□□□□□ -0.98
CHD4-208ENST00000540960 KCNMA1Q12791 1236 aa8.95□□□□□ -0.98
CHD4-208ENST00000540960 SNRNP35Q16560 246 aaKnown RBP8.95□□□□□ -0.98
CHD4-208ENST00000540960 MAPK6Q16659 721 aa8.95□□□□□ -0.98
CHD4-208ENST00000540960 UAP1L1Q3KQV9 507 aa8.95□□□□□ -0.98
CHD4-208ENST00000540960 TDRD12Q587J7 1177 aaKnown RBP8.95□□□□□ -0.98
CHD4-208ENST00000540960 WDR44Q5JSH3 913 aa8.95□□□□□ -0.98
CHD4-208ENST00000540960 CCDC122Q5T0U0 273 aa8.95□□□□□ -0.98
CHD4-208ENST00000540960 KRT39Q6A163 491 aa8.95□□□□□ -0.98
CHD4-208ENST00000540960 RAD9BQ6WBX8 426 aa8.95□□□□□ -0.98
CHD4-208ENST00000540960 SYT10Q6XYQ8 523 aa8.95□□□□□ -0.98
CHD4-208ENST00000540960 TOGARAM2Q6ZUX3 1019 aa8.95□□□□□ -0.98
CHD4-208ENST00000540960 C17orf53Q8N3J3 647 aaPredicted RBP8.95□□□□□ -0.98
CHD4-208ENST00000540960 CEP112Q8N8E3 955 aa8.95□□□□□ -0.98
CHD4-208ENST00000540960 RNF169Q8NCN4 708 aa8.95□□□□□ -0.98
CHD4-208ENST00000540960 BAP1Q92560 729 aa8.95□□□□□ -0.98
CHD4-208ENST00000540960 EEF2KMTQ96G04 330 aa8.95□□□□□ -0.98
CHD4-208ENST00000540960 FAXDC2Q96IV6 333 aa8.95□□□□□ -0.98
CHD4-208ENST00000540960 FNBP1Q96RU3 617 aa8.95□□□□□ -0.98
CHD4-208ENST00000540960 FGFBP2Q9BYJ0 223 aa8.95□□□□□ -0.98
CHD4-208ENST00000540960 L2HGDHQ9H9P8 463 aa8.95□□□□□ -0.98
CHD4-208ENST00000540960 AGPAT5Q9NUQ2 364 aa8.95□□□□□ -0.98
CHD4-208ENST00000540960 KCNK4Q9NYG8 393 aa8.95□□□□□ -0.98
CHD4-208ENST00000540960 APEX2Q9UBZ4 518 aa8.95□□□□□ -0.98
CHD4-208ENST00000540960 MRPS17Q9Y2R5 130 aaKnown RBP8.95□□□□□ -0.98
CHD4-208ENST00000540960 STYXL1Q9Y6J8 313 aa8.95□□□□□ -0.98
CHD4-208ENST00000540960 WDR81Q562E7 1941 aa8.95□□□□□ -0.98
CHD4-208ENST00000540960 ZMYM2Q9UBW7 1377 aa8.95□□□□□ -0.98
CHD4-208ENST00000540960 UQCRHLA0A096LP55 91 aa8.94□□□□□ -0.98
CHD4-208ENST00000540960 LRRIQ4A6NIV6 560 aa8.94□□□□□ -0.98
CHD4-208ENST00000540960 BTNL10A8MVZ5 291 aa8.94□□□□□ -0.98
CHD4-208ENST00000540960 C2CD2LO14523 706 aa8.94□□□□□ -0.98
CHD4-208ENST00000540960 B4GALT3O60512 393 aa8.94□□□□□ -0.98
CHD4-208ENST00000540960 TOM1L1O75674 476 aa8.94□□□□□ -0.98
CHD4-208ENST00000540960 UQCRHP07919 91 aa8.94□□□□□ -0.98
CHD4-208ENST00000540960 CHRNB1P11230 501 aa8.94□□□□□ -0.98
CHD4-208ENST00000540960 FSHRP23945 695 aa8.94□□□□□ -0.98
CHD4-208ENST00000540960 EIF4A3P38919 411 aaKnown RBP8.94□□□□□ -0.98
CHD4-208ENST00000540960 MAGEA1P43355 309 aa8.94□□□□□ -0.98
CHD4-208ENST00000540960 MXI1P50539 228 aa8.94□□□□□ -0.98
CHD4-208ENST00000540960 KIF11P52732 1056 aa8.94□□□□□ -0.98
CHD4-208ENST00000540960 RAPGEF1Q13905 1077 aa8.94□□□□□ -0.98
CHD4-208ENST00000540960 SLC18A3Q16572 532 aa8.94□□□□□ -0.98
CHD4-208ENST00000540960 WHAMMP3Q1A5X7 153 aa8.94□□□□□ -0.98
CHD4-208ENST00000540960 CCDC70Q6NSX1 233 aa8.94□□□□□ -0.98
CHD4-208ENST00000540960 TRIM65Q6PJ69 517 aa8.94□□□□□ -0.98
CHD4-208ENST00000540960 POTEHQ6S545 545 aa8.94□□□□□ -0.98
CHD4-208ENST00000540960 WDR5BQ86VZ2 330 aa8.94□□□□□ -0.98
CHD4-208ENST00000540960 ABI1Q8IZP0 508 aa8.94□□□□□ -0.98
CHD4-208ENST00000540960 FGF13Q92913 245 aa8.94□□□□□ -0.98
CHD4-208ENST00000540960 NOX5Q96PH1 765 aa8.94□□□□□ -0.98
CHD4-208ENST00000540960 PPP1R16BQ96T49 567 aa8.94□□□□□ -0.98
CHD4-208ENST00000540960 NAPGQ99747 312 aaPredicted RBP8.94□□□□□ -0.98
CHD4-208ENST00000540960 EMILIN2Q9BXX0 1053 aa8.94□□□□□ -0.98
CHD4-208ENST00000540960 IMPG2Q9BZV3 1241 aa8.94□□□□□ -0.98
CHD4-208ENST00000540960 DNAI2Q9GZS0 605 aa8.94□□□□□ -0.98
CHD4-208ENST00000540960 INTS2Q9H0H0 1204 aaKnown RBP8.94□□□□□ -0.98
CHD4-208ENST00000540960 TMEM8AQ9HCN3 771 aa8.94□□□□□ -0.98
CHD4-208ENST00000540960 RBM12Q9NTZ6 932 aaKnown RBP8.94□□□□□ -0.98
CHD4-208ENST00000540960 RNF14Q9UBS8 474 aa8.94□□□□□ -0.98
CHD4-208ENST00000540960 CDH7Q9ULB5 785 aa8.94□□□□□ -0.98
CHD4-208ENST00000540960 PCDHA13Q9Y5I0 950 aa8.94□□□□□ -0.98
CHD4-208ENST00000540960 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.94□□□□□ -0.98
CHD4-208ENST00000540960 IGKV6-21A0A0C4DH24 114 aa8.93□□□□□ -0.98
CHD4-208ENST00000540960 USP27XA6NNY8 438 aa8.93□□□□□ -0.98
CHD4-208ENST00000540960 TEX28O15482 410 aa8.93□□□□□ -0.98
CHD4-208ENST00000540960 CLDN3O15551 220 aa8.93□□□□□ -0.98
CHD4-208ENST00000540960 PJA2O43164 708 aa8.93□□□□□ -0.98
CHD4-208ENST00000540960 URI1O94763 535 aaPredicted RBP8.93□□□□□ -0.98
CHD4-208ENST00000540960 PAPLNO95428 1278 aa8.93□□□□□ -0.98
CHD4-208ENST00000540960 GALTP07902 379 aa8.93□□□□□ -0.98
CHD4-208ENST00000540960 PRLRP16471 622 aa8.93□□□□□ -0.98
CHD4-208ENST00000540960 GLRA2P23416 452 aa8.93□□□□□ -0.98
CHD4-208ENST00000540960 SOX5P35711 763 aa8.93□□□□□ -0.98
CHD4-208ENST00000540960 CASP4P49662 377 aa8.93□□□□□ -0.98
CHD4-208ENST00000540960 CKAP4Q07065 602 aaKnown RBP8.93□□□□□ -0.98
CHD4-208ENST00000540960 KCNA1Q09470 495 aa8.93□□□□□ -0.98
CHD4-208ENST00000540960 PSMD6Q15008 389 aa8.93□□□□□ -0.98
CHD4-208ENST00000540960 PLCB4Q15147 1175 aa8.93□□□□□ -0.98
CHD4-208ENST00000540960 ZNF569Q5MCW4 686 aa8.93□□□□□ -0.98
CHD4-208ENST00000540960 WDR59Q6PJI9 974 aa8.93□□□□□ -0.98
CHD4-208ENST00000540960 Q6ZS52 159 aa8.93□□□□□ -0.98
CHD4-208ENST00000540960 TAS1R1Q7RTX1 841 aa8.93□□□□□ -0.98
CHD4-208ENST00000540960 GRASPQ7Z6J2 395 aaPredicted RBP8.93□□□□□ -0.98
CHD4-208ENST00000540960 RAB44Q7Z6P3 723 aaPredicted RBP8.93□□□□□ -0.98
CHD4-208ENST00000540960 FAM228AQ86W67 206 aa8.93□□□□□ -0.98
CHD4-208ENST00000540960 ECHDC2Q86YB7 292 aa8.93□□□□□ -0.98
CHD4-208ENST00000540960 PDCL2Q8N4E4 241 aa8.93□□□□□ -0.98
CHD4-208ENST00000540960 SPEM1Q8N4L4 309 aa8.93□□□□□ -0.98
CHD4-208ENST00000540960 ITFG1Q8TB96 612 aa8.93□□□□□ -0.98
CHD4-208ENST00000540960 GAB3Q8WWW8 586 aa8.93□□□□□ -0.98
CHD4-208ENST00000540960 TAF4BQ92750 862 aa8.93□□□□□ -0.98
CHD4-208ENST00000540960 NT5C1BQ96P26 610 aa8.93□□□□□ -0.98
CHD4-208ENST00000540960 TSPAN18Q96SJ8 248 aa8.93□□□□□ -0.98
CHD4-208ENST00000540960 INO80BQ9C086 356 aaPredicted RBP8.93□□□□□ -0.98
CHD4-208ENST00000540960 GANQ9H2C0 597 aa8.93□□□□□ -0.98
CHD4-208ENST00000540960 FAM124BQ9H5Z6 455 aaPredicted RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms