RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 CA8P35219 290 aa11.27□□□□□ -0.61
ATL3-204ENST00000540699 ASPAP45381 313 aa11.27□□□□□ -0.61
ATL3-204ENST00000540699 LHX1P48742 406 aa11.27□□□□□ -0.61
ATL3-204ENST00000540699 TNNC1P63316 161 aa11.27□□□□□ -0.61
ATL3-204ENST00000540699 KRT83P78385 493 aa11.27□□□□□ -0.61
ATL3-204ENST00000540699 RBM10P98175 930 aaKnown RBP11.27□□□□□ -0.61
ATL3-204ENST00000540699 DLX2Q07687 328 aaPredicted RBP11.27□□□□□ -0.61
ATL3-204ENST00000540699 CUL2Q13617 745 aa11.27□□□□□ -0.61
ATL3-204ENST00000540699 SLC18A3Q16572 532 aa11.27□□□□□ -0.61
ATL3-204ENST00000540699 WDR44Q5JSH3 913 aa11.27□□□□□ -0.61
ATL3-204ENST00000540699 TPGS2Q68CL5 300 aa11.27□□□□□ -0.61
ATL3-204ENST00000540699 OSTM1Q86WC4 334 aa11.27□□□□□ -0.61
ATL3-204ENST00000540699 ADGRF2Q8IZF7 708 aa11.27□□□□□ -0.61
ATL3-204ENST00000540699 THEM5Q8N1Q8 247 aa11.27□□□□□ -0.61
ATL3-204ENST00000540699 CMASQ8NFW8 434 aaPredicted RBP11.27□□□□□ -0.61
ATL3-204ENST00000540699 SLC30A5Q8TAD4 765 aa11.27□□□□□ -0.61
ATL3-204ENST00000540699 ZNF461Q8TAF7 563 aa11.27□□□□□ -0.61
ATL3-204ENST00000540699 JAKMIP2Q96AA8 810 aa11.27□□□□□ -0.61
ATL3-204ENST00000540699 PKMYT1Q99640 499 aa11.27□□□□□ -0.61
ATL3-204ENST00000540699 ARID3AQ99856 593 aa11.27□□□□□ -0.61
ATL3-204ENST00000540699 ACBD6Q9BR61 282 aa11.27□□□□□ -0.61
ATL3-204ENST00000540699 BCO2Q9BYV7 579 aa11.27□□□□□ -0.61
ATL3-204ENST00000540699 RHOBTB2Q9BYZ6 727 aa11.27□□□□□ -0.61
ATL3-204ENST00000540699 ZCWPW1Q9H0M4 648 aa11.27□□□□□ -0.61
ATL3-204ENST00000540699 DEF6Q9H4E7 631 aa11.27□□□□□ -0.61
ATL3-204ENST00000540699 PLEKHA4Q9H4M7 779 aa11.27□□□□□ -0.61
ATL3-204ENST00000540699 FAM124BQ9H5Z6 455 aaPredicted RBP11.27□□□□□ -0.61
ATL3-204ENST00000540699 IGFLR1Q9H665 355 aa11.27□□□□□ -0.61
ATL3-204ENST00000540699 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.27□□□□□ -0.61
ATL3-204ENST00000540699 DZANK1Q9NVP4 752 aa11.27□□□□□ -0.61
ATL3-204ENST00000540699 POLIQ9UNA4 740 aa11.27□□□□□ -0.61
ATL3-204ENST00000540699 CNTN6Q9UQ52 1028 aa11.27□□□□□ -0.61
ATL3-204ENST00000540699 NME7Q9Y5B8 376 aa11.27□□□□□ -0.61
ATL3-204ENST00000540699 ATP8B3O60423 1300 aa11.27□□□□□ -0.61
ATL3-204ENST00000540699 A0A087X0T9 212 aa11.26□□□□□ -0.61
ATL3-204ENST00000540699 RCCD1A6NED2 376 aa11.26□□□□□ -0.61
ATL3-204ENST00000540699 DDX3XO00571 662 aaKnown RBP eCLIP11.26□□□□□ -0.611e-12■■□□□ 13
ATL3-204ENST00000540699 AKR1B10O60218 316 aa11.26□□□□□ -0.61
ATL3-204ENST00000540699 VNN2O95498 520 aa11.26□□□□□ -0.61
ATL3-204ENST00000540699 CCDC172P0C7W6 258 aa11.26□□□□□ -0.61
ATL3-204ENST00000540699 FAM228BP0C875 321 aa11.26□□□□□ -0.61
ATL3-204ENST00000540699 SRGAP2BP0DMP2 458 aa11.26□□□□□ -0.61
ATL3-204ENST00000540699 ATF2P15336 505 aa11.26□□□□□ -0.61
ATL3-204ENST00000540699 HOXB8P17481 243 aaPredicted RBP11.26□□□□□ -0.61
ATL3-204ENST00000540699 TBXAS1P24557 533 aaPredicted RBP11.26□□□□□ -0.61
ATL3-204ENST00000540699 VAV2P52735 878 aa11.26□□□□□ -0.61
ATL3-204ENST00000540699 CYP27A1Q02318 531 aa11.26□□□□□ -0.61
ATL3-204ENST00000540699 ZP2Q05996 745 aa11.26□□□□□ -0.61
ATL3-204ENST00000540699 GFPT1Q06210 699 aaPredicted RBP11.26□□□□□ -0.61
ATL3-204ENST00000540699 INCA1Q0VD86 236 aa11.26□□□□□ -0.61
ATL3-204ENST00000540699 GPR17Q13304 367 aa11.26□□□□□ -0.61
ATL3-204ENST00000540699 ANKRD54Q6NXT1 300 aa11.26□□□□□ -0.61
ATL3-204ENST00000540699 SYCE2Q6PIF2 218 aa11.26□□□□□ -0.61
ATL3-204ENST00000540699 PALB2Q86YC2 1186 aa11.26□□□□□ -0.61
ATL3-204ENST00000540699 TCEAL8Q8IYN2 117 aa11.26□□□□□ -0.61
ATL3-204ENST00000540699 KREMEN2Q8NCW0 462 aa11.26□□□□□ -0.61
ATL3-204ENST00000540699 EPS8L1Q8TE68 723 aa11.26□□□□□ -0.61
ATL3-204ENST00000540699 C16orf45Q96MC5 204 aaPredicted RBP11.26□□□□□ -0.61
ATL3-204ENST00000540699 MMS19Q96T76 1030 aa11.26□□□□□ -0.61
ATL3-204ENST00000540699 MRPL45Q9BRJ2 306 aaKnown RBP11.26□□□□□ -0.61
ATL3-204ENST00000540699 IMPG2Q9BZV3 1241 aa11.26□□□□□ -0.61
ATL3-204ENST00000540699 NIF3L1Q9GZT8 377 aa11.26□□□□□ -0.61
ATL3-204ENST00000540699 KCNH6Q9H252 994 aa11.26□□□□□ -0.61
ATL3-204ENST00000540699 SMYD3Q9H7B4 428 aa11.26□□□□□ -0.61
ATL3-204ENST00000540699 CYP3A43Q9HB55 503 aa11.26□□□□□ -0.61
ATL3-204ENST00000540699 DDX43Q9NXZ2 648 aaKnown RBP11.26□□□□□ -0.61
ATL3-204ENST00000540699 HSFX1Q9UBD0 423 aa11.26□□□□□ -0.61
ATL3-204ENST00000540699 PRKAG3Q9UGI9 489 aa11.26□□□□□ -0.61
ATL3-204ENST00000540699 AFF4Q9UHB7 1163 aaKnown RBP11.26□□□□□ -0.61
ATL3-204ENST00000540699 DPP7Q9UHL4 492 aa11.26□□□□□ -0.61
ATL3-204ENST00000540699 BARX2Q9UMQ3 279 aaPredicted RBP11.26□□□□□ -0.61
ATL3-204ENST00000540699 FAM50BQ9Y247 325 aa11.26□□□□□ -0.61
ATL3-204ENST00000540699 MYH10P35580 1976 aa11.26□□□□□ -0.61
ATL3-204ENST00000540699 DENND4CQ5VZ89 1909 aa11.25□□□□□ -0.61
ATL3-204ENST00000540699 DOCK8Q8NF50 2099 aa11.25□□□□□ -0.61
ATL3-204ENST00000540699 C19orf67A6NJJ6 358 aa11.25□□□□□ -0.61
ATL3-204ENST00000540699 PJA2O43164 708 aa11.25□□□□□ -0.61
ATL3-204ENST00000540699 ABL1P00519 1130 aa11.25□□□□□ -0.61
ATL3-204ENST00000540699 POU2F2P09086 479 aa11.25□□□□□ -0.61
ATL3-204ENST00000540699 PCSK1P29120 753 aa11.25□□□□□ -0.61
ATL3-204ENST00000540699 HOXA9P31269 272 aa11.25□□□□□ -0.61
ATL3-204ENST00000540699 ZNF132P52740 706 aa11.25□□□□□ -0.61
ATL3-204ENST00000540699 SMARCB1Q12824 385 aa11.25□□□□□ -0.61
ATL3-204ENST00000540699 INTS6LQ5JSJ4 861 aaKnown RBP11.25□□□□□ -0.61
ATL3-204ENST00000540699 LLGL2Q6P1M3 1020 aa11.25□□□□□ -0.61
ATL3-204ENST00000540699 FAM171BQ6P995 826 aa11.25□□□□□ -0.61
ATL3-204ENST00000540699 GLYCTKQ8IVS8 523 aa11.25□□□□□ -0.61
ATL3-204ENST00000540699 ADHFE1Q8IWW8 467 aa11.25□□□□□ -0.61
ATL3-204ENST00000540699 SMRP1Q8NCR6 262 aa11.25□□□□□ -0.61
ATL3-204ENST00000540699 C2orf15Q8WU43 125 aaKnown RBP11.25□□□□□ -0.61
ATL3-204ENST00000540699 TMEM209Q96SK2 561 aa11.25□□□□□ -0.61
ATL3-204ENST00000540699 LACRTQ9GZZ8 138 aa11.25□□□□□ -0.61
ATL3-204ENST00000540699 SDCBP2Q9H190 292 aa11.25□□□□□ -0.61
ATL3-204ENST00000540699 S1PR5Q9H228 398 aa11.25□□□□□ -0.61
ATL3-204ENST00000540699 MAN1C1Q9NR34 630 aa11.25□□□□□ -0.61
ATL3-204ENST00000540699 ZDHHC7Q9NXF8 308 aa11.25□□□□□ -0.61
ATL3-204ENST00000540699 NXF1Q9UBU9 619 aaKnown RBP11.25□□□□□ -0.61
ATL3-204ENST00000540699 ADAMTS1Q9UHI8 967 aa11.25□□□□□ -0.61
ATL3-204ENST00000540699 NOCTQ9UK39 431 aaKnown RBP11.25□□□□□ -0.61
ATL3-204ENST00000540699 CDH9Q9ULB4 789 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms