RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 SETDB1Q15047 1291 aa8.09□□□□□ -1.11
CCDC60-204ENST00000539847 TLR1Q15399 786 aa8.09□□□□□ -1.11
CCDC60-204ENST00000539847 ZRSR2Q15696 482 aaKnown RBP8.09□□□□□ -1.11
CCDC60-204ENST00000539847 ZC3H12AQ5D1E8 599 aaKnown RBP8.09□□□□□ -1.11
CCDC60-204ENST00000539847 SH3PXD2AQ5TCZ1 1133 aa8.09□□□□□ -1.11
CCDC60-204ENST00000539847 TAPT1Q6NXT6 567 aa8.09□□□□□ -1.11
CCDC60-204ENST00000539847 RHBDF2Q6PJF5 856 aa8.09□□□□□ -1.11
CCDC60-204ENST00000539847 OTOP2Q7RTS6 562 aa8.09□□□□□ -1.11
CCDC60-204ENST00000539847 SDCCAG8Q86SQ7 713 aaPredicted RBP8.09□□□□□ -1.11
CCDC60-204ENST00000539847 GPBP1Q86WP2 473 aa8.09□□□□□ -1.11
CCDC60-204ENST00000539847 TDRPQ86YL5 185 aa8.09□□□□□ -1.11
CCDC60-204ENST00000539847 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.09□□□□□ -1.11
CCDC60-204ENST00000539847 GJD3Q8N144 294 aa8.09□□□□□ -1.11
CCDC60-204ENST00000539847 PRELID2Q8N945 189 aa8.09□□□□□ -1.11
CCDC60-204ENST00000539847 FBXO25Q8TCJ0 367 aa8.09□□□□□ -1.11
CCDC60-204ENST00000539847 ARHGEF2Q92974 986 aaKnown RBP8.09□□□□□ -1.11
CCDC60-204ENST00000539847 SLC35C1Q96A29 364 aa8.09□□□□□ -1.11
CCDC60-204ENST00000539847 VWCEQ96DN2 955 aa8.09□□□□□ -1.11
CCDC60-204ENST00000539847 BICD1Q96G01 975 aa8.09□□□□□ -1.11
CCDC60-204ENST00000539847 PIGSQ96S52 555 aa8.09□□□□□ -1.11
CCDC60-204ENST00000539847 CELF4Q9BZC1 486 aaKnown RBP8.09□□□□□ -1.11
CCDC60-204ENST00000539847 TRPV6Q9H1D0 765 aa8.09□□□□□ -1.11
CCDC60-204ENST00000539847 POLD4Q9HCU8 107 aa8.09□□□□□ -1.11
CCDC60-204ENST00000539847 ABCF3Q9NUQ8 709 aa8.09□□□□□ -1.11
CCDC60-204ENST00000539847 CYP39A1Q9NYL5 469 aa8.09□□□□□ -1.11
CCDC60-204ENST00000539847 SENP1Q9P0U3 644 aa8.09□□□□□ -1.11
CCDC60-204ENST00000539847 SEL1LQ9UBV2 794 aa8.09□□□□□ -1.11
CCDC60-204ENST00000539847 LRFN2Q9ULH4 789 aa8.09□□□□□ -1.11
CCDC60-204ENST00000539847 DNM3Q9UQ16 869 aa8.09□□□□□ -1.11
CCDC60-204ENST00000539847 SNX24Q9Y343 169 aa8.09□□□□□ -1.11
CCDC60-204ENST00000539847 HCN4Q9Y3Q4 1203 aa8.09□□□□□ -1.11
CCDC60-204ENST00000539847 L3MBTL1Q9Y468 752 aa8.09□□□□□ -1.11
CCDC60-204ENST00000539847 ALG6Q9Y672 507 aa8.09□□□□□ -1.11
CCDC60-204ENST00000539847 MTCH2Q9Y6C9 303 aa8.09□□□□□ -1.11
CCDC60-204ENST00000539847 USH1CQ9Y6N9 552 aa8.09□□□□□ -1.11
CCDC60-204ENST00000539847 BRWD1Q9NSI6 2320 aa8.09□□□□□ -1.11
CCDC60-204ENST00000539847 FRMPD4Q14CM0 1322 aa8.08□□□□□ -1.12
CCDC60-204ENST00000539847 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.08□□□□□ -1.12
CCDC60-204ENST00000539847 TLDC2A0PJX2 215 aa8.08□□□□□ -1.12
CCDC60-204ENST00000539847 TCP11X1B4DZS4 312 aa8.08□□□□□ -1.12
CCDC60-204ENST00000539847 PDLIM1O00151 329 aa8.08□□□□□ -1.12
CCDC60-204ENST00000539847 FSCN2O14926 492 aa8.08□□□□□ -1.12
CCDC60-204ENST00000539847 ZBTB39O15060 712 aa8.08□□□□□ -1.12
CCDC60-204ENST00000539847 SLC37A4O43826 429 aa8.08□□□□□ -1.12
CCDC60-204ENST00000539847 DCTN3O75935 186 aa8.08□□□□□ -1.12
CCDC60-204ENST00000539847 TTC4O95801 387 aa8.08□□□□□ -1.12
CCDC60-204ENST00000539847 NR3C1P04150 777 aa8.08□□□□□ -1.12
CCDC60-204ENST00000539847 ICAM1P05362 532 aa8.08□□□□□ -1.12
CCDC60-204ENST00000539847 KRT16P08779 473 aa8.08□□□□□ -1.12
CCDC60-204ENST00000539847 ABHD2P08910 425 aa8.08□□□□□ -1.12
CCDC60-204ENST00000539847 RPA1P27694 616 aa8.08□□□□□ -1.12
CCDC60-204ENST00000539847 RPL21P46778 160 aaKnown RBP8.08□□□□□ -1.12
CCDC60-204ENST00000539847 DNA2P51530 1060 aa8.08□□□□□ -1.12
CCDC60-204ENST00000539847 CCL23P55773 120 aa8.08□□□□□ -1.12
CCDC60-204ENST00000539847 SH3BGRP55822 239 aaPredicted RBP8.08□□□□□ -1.12
CCDC60-204ENST00000539847 GPC5P78333 572 aa8.08□□□□□ -1.12
CCDC60-204ENST00000539847 PURAQ00577 322 aaKnown RBP8.08□□□□□ -1.12
CCDC60-204ENST00000539847 IL9RQ01113 521 aa8.08□□□□□ -1.12
CCDC60-204ENST00000539847 CALCOCO2Q13137 446 aa8.08□□□□□ -1.12
CCDC60-204ENST00000539847 TAF11Q15544 211 aa8.08□□□□□ -1.12
CCDC60-204ENST00000539847 CCDC85BQ15834 202 aaPredicted RBP8.08□□□□□ -1.12
CCDC60-204ENST00000539847 PDCD2Q16342 344 aaPredicted RBP8.08□□□□□ -1.12
CCDC60-204ENST00000539847 FAM133BQ5BKY9 247 aaKnown RBP8.08□□□□□ -1.12
CCDC60-204ENST00000539847 ARSHQ5FYA8 562 aa8.08□□□□□ -1.12
CCDC60-204ENST00000539847 FAM26DQ5JW98 314 aa8.08□□□□□ -1.12
CCDC60-204ENST00000539847 GPATCH4Q5T3I0 446 aaKnown RBP8.08□□□□□ -1.12
CCDC60-204ENST00000539847 SEL1L2Q5TEA6 688 aa8.08□□□□□ -1.12
CCDC60-204ENST00000539847 DCAF12L1Q5VU92 463 aa8.08□□□□□ -1.12
CCDC60-204ENST00000539847 CWF19L1Q69YN2 538 aaKnown RBP8.08□□□□□ -1.12
CCDC60-204ENST00000539847 IRGCQ6NXR0 463 aa8.08□□□□□ -1.12
CCDC60-204ENST00000539847 SLC30A9Q6PML9 568 aa8.08□□□□□ -1.12
CCDC60-204ENST00000539847 VSTM1Q6UX27 236 aa8.08□□□□□ -1.12
CCDC60-204ENST00000539847 STXBP4Q6ZWJ1 553 aa8.08□□□□□ -1.12
CCDC60-204ENST00000539847 ATCAYQ86WG3 371 aa8.08□□□□□ -1.12
CCDC60-204ENST00000539847 ARHGAP18Q8N392 663 aa8.08□□□□□ -1.12
CCDC60-204ENST00000539847 GALNT15Q8N3T1 639 aa8.08□□□□□ -1.12
CCDC60-204ENST00000539847 FITM2Q8N6M3 262 aa8.08□□□□□ -1.12
CCDC60-204ENST00000539847 LNX1Q8TBB1 728 aaPredicted RBP8.08□□□□□ -1.12
CCDC60-204ENST00000539847 MICAL1Q8TDZ2 1067 aa8.08□□□□□ -1.12
CCDC60-204ENST00000539847 PIGOQ8TEQ8 1089 aa8.08□□□□□ -1.12
CCDC60-204ENST00000539847 DYDC1Q8WWB3 177 aa8.08□□□□□ -1.12
CCDC60-204ENST00000539847 DTNBP1Q96EV8 351 aa8.08□□□□□ -1.12
CCDC60-204ENST00000539847 FAM20AQ96MK3 541 aa8.08□□□□□ -1.12
CCDC60-204ENST00000539847 FAM210AQ96ND0 272 aa8.08□□□□□ -1.12
CCDC60-204ENST00000539847 TRAPPC9Q96Q05 1148 aa8.08□□□□□ -1.12
CCDC60-204ENST00000539847 MPHOSPH6Q99547 160 aaKnown RBP8.08□□□□□ -1.12
CCDC60-204ENST00000539847 ZSWIM1Q9BR11 485 aa8.08□□□□□ -1.12
CCDC60-204ENST00000539847 TRIM51Q9BSJ1 452 aa8.08□□□□□ -1.12
CCDC60-204ENST00000539847 POLR3CQ9BUI4 534 aaPredicted RBP8.08□□□□□ -1.12
CCDC60-204ENST00000539847 FAM192AQ9GZU8 254 aa8.08□□□□□ -1.12
CCDC60-204ENST00000539847 VCXQ9H320 206 aa8.08□□□□□ -1.12
CCDC60-204ENST00000539847 DCLRE1BQ9H816 532 aa8.08□□□□□ -1.12
CCDC60-204ENST00000539847 HOMER2Q9NSB8 354 aa8.08□□□□□ -1.12
CCDC60-204ENST00000539847 DMAC2Q9NW81 257 aa8.08□□□□□ -1.12
CCDC60-204ENST00000539847 ETAA1Q9NY74 926 aa8.08□□□□□ -1.12
CCDC60-204ENST00000539847 NKIRAS1Q9NYS0 192 aa8.08□□□□□ -1.12
CCDC60-204ENST00000539847 PKD2L1Q9P0L9 805 aa8.08□□□□□ -1.12
CCDC60-204ENST00000539847 CPSF2Q9P2I0 782 aaKnown RBP8.08□□□□□ -1.12
CCDC60-204ENST00000539847 POLIQ9UNA4 740 aa8.08□□□□□ -1.12
CCDC60-204ENST00000539847 NR2E1Q9Y466 385 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms