RNA–Protein interactions for RNA: ENST00000539784.1

TSPAN9-IT1-201, TSPAN9 intronic transcript 1, humanhuman

TSL 4 BASIC

Gene TSPAN9-IT1, Length 562 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-IT1-201ENST00000539784 ZMYM5Q9UJ78 669 aa13.61□□□□□ -0.23
TSPAN9-IT1-201ENST00000539784 MAPK8IP1Q9UQF2 711 aa13.61□□□□□ -0.23
TSPAN9-IT1-201ENST00000539784 ZFHX2Q9C0A1 2572 aaPredicted RBP13.6□□□□□ -0.23
TSPAN9-IT1-201ENST00000539784 TRAV19A0A0A6YYK7 116 aa13.6□□□□□ -0.23
TSPAN9-IT1-201ENST00000539784 PDXKO00764 312 aa13.6□□□□□ -0.23
TSPAN9-IT1-201ENST00000539784 OBSL1O75147 1896 aa13.6□□□□□ -0.23
TSPAN9-IT1-201ENST00000539784 TACC1O75410 805 aa13.6□□□□□ -0.23
TSPAN9-IT1-201ENST00000539784 MYL1P05976 194 aa13.6□□□□□ -0.23
TSPAN9-IT1-201ENST00000539784 CKMP06732 381 aa13.6□□□□□ -0.23
TSPAN9-IT1-201ENST00000539784 CHRNB1P11230 501 aa13.6□□□□□ -0.23
TSPAN9-IT1-201ENST00000539784 PTPN1P18031 435 aaKnown RBP13.6□□□□□ -0.23
TSPAN9-IT1-201ENST00000539784 ATICP31939 592 aa13.6□□□□□ -0.23
TSPAN9-IT1-201ENST00000539784 CDH8P55286 799 aa13.6□□□□□ -0.23
TSPAN9-IT1-201ENST00000539784 IFRD2Q12894 506 aaPredicted RBP13.6□□□□□ -0.23
TSPAN9-IT1-201ENST00000539784 NCOA4Q13772 614 aa13.6□□□□□ -0.23
TSPAN9-IT1-201ENST00000539784 LRRC32Q14392 662 aa13.6□□□□□ -0.23
TSPAN9-IT1-201ENST00000539784 ITPRIPL2Q3MIP1 535 aa13.6□□□□□ -0.23
TSPAN9-IT1-201ENST00000539784 ZNF667Q5HYK9 610 aa13.6□□□□□ -0.23
TSPAN9-IT1-201ENST00000539784 CC2D1AQ6P1N0 951 aaPredicted RBP13.6□□□□□ -0.23
TSPAN9-IT1-201ENST00000539784 VSTM1Q6UX27 236 aa13.6□□□□□ -0.23
TSPAN9-IT1-201ENST00000539784 KRBA2Q6ZNG9 492 aa13.6□□□□□ -0.23
TSPAN9-IT1-201ENST00000539784 RALGPS2Q86X27 583 aaPredicted RBP13.6□□□□□ -0.23
TSPAN9-IT1-201ENST00000539784 ARL14EPQ8N8R7 260 aaPredicted RBP13.6□□□□□ -0.23
TSPAN9-IT1-201ENST00000539784 RIN3Q8TB24 985 aa13.6□□□□□ -0.23
TSPAN9-IT1-201ENST00000539784 MSANTD3Q96H12 275 aa13.6□□□□□ -0.23
TSPAN9-IT1-201ENST00000539784 MYRFLQ96LU7 910 aa13.6□□□□□ -0.23
TSPAN9-IT1-201ENST00000539784 SLC22A12Q96S37 553 aa13.6□□□□□ -0.23
TSPAN9-IT1-201ENST00000539784 XYLT2Q9H1B5 865 aa13.6□□□□□ -0.23
TSPAN9-IT1-201ENST00000539784 EBF3Q9H4W6 596 aa13.6□□□□□ -0.23
TSPAN9-IT1-201ENST00000539784 KIF9Q9HAQ2 790 aa13.6□□□□□ -0.23
TSPAN9-IT1-201ENST00000539784 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.6□□□□□ -0.23
TSPAN9-IT1-201ENST00000539784 PRMT8Q9NR22 394 aaPredicted RBP13.6□□□□□ -0.23
TSPAN9-IT1-201ENST00000539784 DMAC2Q9NW81 257 aa13.6□□□□□ -0.23
TSPAN9-IT1-201ENST00000539784 C2orf78A6NCI8 922 aa13.59□□□□□ -0.23
TSPAN9-IT1-201ENST00000539784 F8VP50 259 aa13.59□□□□□ -0.23
TSPAN9-IT1-201ENST00000539784 CLDN5O00501 218 aa13.59□□□□□ -0.23
TSPAN9-IT1-201ENST00000539784 TRIM66O15016 1216 aa13.59□□□□□ -0.23
TSPAN9-IT1-201ENST00000539784 CALUO43852 315 aaPredicted RBP13.59□□□□□ -0.23
TSPAN9-IT1-201ENST00000539784 ZNF202O95125 648 aa13.59□□□□□ -0.23
TSPAN9-IT1-201ENST00000539784 KIF20AO95235 890 aa13.59□□□□□ -0.23
TSPAN9-IT1-201ENST00000539784 ABL1P00519 1130 aa13.59□□□□□ -0.23
TSPAN9-IT1-201ENST00000539784 USP17L7P0C7H9 530 aa13.59□□□□□ -0.23
TSPAN9-IT1-201ENST00000539784 ARSAP15289 507 aa13.59□□□□□ -0.23
TSPAN9-IT1-201ENST00000539784 AP3M2P53677 418 aa13.59□□□□□ -0.23
TSPAN9-IT1-201ENST00000539784 MLLT6P55198 1093 aaPredicted RBP13.59□□□□□ -0.23
TSPAN9-IT1-201ENST00000539784 USP46P62068 366 aa13.59□□□□□ -0.23
TSPAN9-IT1-201ENST00000539784 SATB1Q01826 763 aa13.59□□□□□ -0.23
TSPAN9-IT1-201ENST00000539784 DPYDQ12882 1025 aa13.59□□□□□ -0.23
TSPAN9-IT1-201ENST00000539784 RUNX3Q13761 415 aa13.59□□□□□ -0.23
TSPAN9-IT1-201ENST00000539784 KCNB1Q14721 858 aa13.59□□□□□ -0.23
TSPAN9-IT1-201ENST00000539784 WDR44Q5JSH3 913 aa13.59□□□□□ -0.23
TSPAN9-IT1-201ENST00000539784 C1orf228Q6PIY5 440 aa13.59□□□□□ -0.23
TSPAN9-IT1-201ENST00000539784 Q6ZS52 159 aa13.59□□□□□ -0.23
TSPAN9-IT1-201ENST00000539784 DENND5BQ6ZUT9 1274 aa13.59□□□□□ -0.23
TSPAN9-IT1-201ENST00000539784 SLC9A9Q8IVB4 645 aa13.59□□□□□ -0.23
TSPAN9-IT1-201ENST00000539784 B3GALNT2Q8NCR0 500 aa13.59□□□□□ -0.23
TSPAN9-IT1-201ENST00000539784 SPATA17Q96L03 361 aa13.59□□□□□ -0.23
TSPAN9-IT1-201ENST00000539784 MED10Q9BTT4 135 aa13.59□□□□□ -0.23
TSPAN9-IT1-201ENST00000539784 ZNF518BQ9C0D4 1074 aa13.59□□□□□ -0.23
TSPAN9-IT1-201ENST00000539784 HPS4Q9NQG7 708 aa13.59□□□□□ -0.23
TSPAN9-IT1-201ENST00000539784 ZSCAN32Q9NX65 697 aa13.59□□□□□ -0.23
TSPAN9-IT1-201ENST00000539784 FRMD4BQ9Y2L6 1034 aa13.59□□□□□ -0.23
TSPAN9-IT1-201ENST00000539784 PCDHGA2Q9Y5H1 932 aa13.59□□□□□ -0.23
TSPAN9-IT1-201ENST00000539784 USP34Q70CQ2 3546 aa13.59□□□□□ -0.23
TSPAN9-IT1-201ENST00000539784 CACNA1IQ9P0X4 2223 aa13.59□□□□□ -0.23
TSPAN9-IT1-201ENST00000539784 KIF26AQ9ULI4 1882 aaPredicted RBP13.59□□□□□ -0.23
TSPAN9-IT1-201ENST00000539784 DENND4CQ5VZ89 1909 aa13.58□□□□□ -0.23
TSPAN9-IT1-201ENST00000539784 ZNF638Q14966 1978 aaKnown RBP13.58□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 FAM237AA0A1B0GTK4 181 aa13.58□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 A0A1W2PQ27 194 aa13.58□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 A0A1W2PQ64 194 aa13.58□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 A0A1W2PQD8 194 aa13.58□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 RHOBTB3O94955 611 aa13.58□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 VNN1O95497 513 aa13.58□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 STAU1O95793 577 aaKnown RBP13.58□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 C4BPAP04003 597 aaKnown RBP13.58□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 PIK3CAP42336 1068 aa13.58□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 CCR3P51677 355 aa13.58□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 CACNA2D1P54289 1103 aa13.58□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 GAS6Q14393 721 aa13.58□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 BECN1Q14457 450 aa13.58□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 PPP2R5DQ14738 602 aa13.58□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 MTF1Q14872 753 aa13.58□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 KIAA2013Q8IYS2 634 aa13.58□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 DCLK2Q8N568 766 aa13.58□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 FAM83CQ9BQN1 747 aa13.58□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 B3GNT5Q9BYG0 378 aa13.58□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 SDCBP2Q9H190 292 aa13.58□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 MMRN2Q9H8L6 949 aa13.58□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 TRPM5Q9NZQ8 1165 aa13.58□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 OTOL1A6NHN0 477 aaPredicted RBP13.57□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 SOBPA7XYQ1 873 aa13.57□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 FAM163BP0C2L3 166 aa13.57□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 TRIM49P0CI25 452 aa13.57□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 TRIM49CP0CI26 452 aa13.57□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 HDCP19113 662 aa13.57□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 NR2F2P24468 414 aa13.57□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 CXCL12P48061 93 aa13.57□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 IFNAR2P48551 515 aa13.57□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 CLDN10P78369 228 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms