RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 MMS22LQ6ZRQ5 1243 aa12.43□□□□□ -0.42
VTN-202ENST00000539746 BEND5Q7L4P6 421 aa12.43□□□□□ -0.42
VTN-202ENST00000539746 OTOP2Q7RTS6 562 aa12.43□□□□□ -0.42
VTN-202ENST00000539746 TMEM110Q86TL2 294 aa12.43□□□□□ -0.42
VTN-202ENST00000539746 ZNF280BQ86YH2 543 aa12.43□□□□□ -0.42
VTN-202ENST00000539746 HERC6Q8IVU3 1022 aa12.43□□□□□ -0.42
VTN-202ENST00000539746 CEP112Q8N8E3 955 aa12.43□□□□□ -0.42
VTN-202ENST00000539746 FEZF2Q8TBJ5 459 aa12.43□□□□□ -0.42
VTN-202ENST00000539746 SLC2A14Q8TDB8 520 aa12.43□□□□□ -0.42
VTN-202ENST00000539746 PIK3R5Q8WYR1 880 aa12.43□□□□□ -0.42
VTN-202ENST00000539746 C11orf70Q9BRQ4 267 aa12.43□□□□□ -0.42
VTN-202ENST00000539746 THAP2Q9H0W7 228 aa12.43□□□□□ -0.42
VTN-202ENST00000539746 SDCBP2Q9H190 292 aa12.43□□□□□ -0.42
VTN-202ENST00000539746 PRDM16Q9HAZ2 1276 aa12.43□□□□□ -0.42
VTN-202ENST00000539746 RNF19AQ9NV58 838 aa12.43□□□□□ -0.42
VTN-202ENST00000539746 DDX56Q9NY93 547 aaKnown RBP12.43□□□□□ -0.42
VTN-202ENST00000539746 REXO2Q9Y3B8 237 aaKnown RBP12.43□□□□□ -0.42
VTN-202ENST00000539746 HYOU1Q9Y4L1 999 aa12.43□□□□□ -0.42
VTN-202ENST00000539746 SAR1BQ9Y6B6 198 aa12.43□□□□□ -0.42
VTN-202ENST00000539746 GOLGA6L10A0A0M3HER8 536 aa12.42□□□□□ -0.42
VTN-202ENST00000539746 PPEF2O14830 753 aa12.42□□□□□ -0.42
VTN-202ENST00000539746 ZNF263O14978 683 aa12.42□□□□□ -0.42
VTN-202ENST00000539746 AP1G2O75843 785 aa12.42□□□□□ -0.42
VTN-202ENST00000539746 F9P00740 461 aa12.42□□□□□ -0.42
VTN-202ENST00000539746 TUBBP07437 444 aa12.42□□□□□ -0.42
VTN-202ENST00000539746 PPP3CCP48454 512 aa12.42□□□□□ -0.42
VTN-202ENST00000539746 AIF1P55008 147 aa12.42□□□□□ -0.42
VTN-202ENST00000539746 GPR17Q13304 367 aa12.42□□□□□ -0.42
VTN-202ENST00000539746 RAB30Q15771 203 aa12.42□□□□□ -0.42
VTN-202ENST00000539746 PAN2Q504Q3 1202 aaKnown RBP12.42□□□□□ -0.42
VTN-202ENST00000539746 TMEM240Q5SV17 173 aa12.42□□□□□ -0.42
VTN-202ENST00000539746 PPP1R26Q5T8A7 1209 aaPredicted RBP12.42□□□□□ -0.42
VTN-202ENST00000539746 LRRC38Q5VT99 294 aa12.42□□□□□ -0.42
VTN-202ENST00000539746 SYT10Q6XYQ8 523 aa12.42□□□□□ -0.42
VTN-202ENST00000539746 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.42□□□□□ -0.42
VTN-202ENST00000539746 SND1Q7KZF4 910 aaKnown RBP eCLIP12.42□□□□□ -0.422e-18■■■■■ 71.9
VTN-202ENST00000539746 CEP57Q86XR8 500 aa12.42□□□□□ -0.42
VTN-202ENST00000539746 COLGALT1Q8NBJ5 622 aa12.42□□□□□ -0.42
VTN-202ENST00000539746 PDZD8Q8NEN9 1154 aa12.42□□□□□ -0.42
VTN-202ENST00000539746 SLC35F5Q8WV83 523 aa12.42□□□□□ -0.42
VTN-202ENST00000539746 CLP1Q92989 425 aaKnown RBP12.42□□□□□ -0.42
VTN-202ENST00000539746 C8orf48Q96LL4 319 aa12.42□□□□□ -0.42
VTN-202ENST00000539746 RUNDC3BQ96NL0 473 aa12.42□□□□□ -0.42
VTN-202ENST00000539746 SLC4A5Q9BY07 1137 aa12.42□□□□□ -0.42
VTN-202ENST00000539746 ZCWPW1Q9H0M4 648 aa12.42□□□□□ -0.42
VTN-202ENST00000539746 CSNK1G1Q9HCP0 422 aa12.42□□□□□ -0.42
VTN-202ENST00000539746 NGRNQ9NPE2 291 aaKnown RBP12.42□□□□□ -0.42
VTN-202ENST00000539746 KRT82Q9NSB4 513 aa12.42□□□□□ -0.42
VTN-202ENST00000539746 HOMER3Q9NSC5 361 aa12.42□□□□□ -0.42
VTN-202ENST00000539746 FAM49BQ9NUQ9 324 aa12.42□□□□□ -0.42
VTN-202ENST00000539746 FNIP2Q9P278 1114 aa12.42□□□□□ -0.42
VTN-202ENST00000539746 ANAPC7Q9UJX3 599 aa12.42□□□□□ -0.42
VTN-202ENST00000539746 TTC3P53804 2025 aa12.42□□□□□ -0.42
VTN-202ENST00000539746 CCDC85CA6NKD9 419 aa12.41□□□□□ -0.42
VTN-202ENST00000539746 PSTPIP1O43586 416 aa12.41□□□□□ -0.42
VTN-202ENST00000539746 FGF19O95750 216 aa12.41□□□□□ -0.42
VTN-202ENST00000539746 ADH1AP07327 375 aa12.41□□□□□ -0.42
VTN-202ENST00000539746 ADORA2BP29275 332 aa12.41□□□□□ -0.42
VTN-202ENST00000539746 SDC4P31431 198 aa12.41□□□□□ -0.42
VTN-202ENST00000539746 RPL34P49207 117 aaKnown RBP12.41□□□□□ -0.42
VTN-202ENST00000539746 NDUFV1P49821 464 aa12.41□□□□□ -0.42
VTN-202ENST00000539746 SLC6A3Q01959 620 aa12.41□□□□□ -0.42
VTN-202ENST00000539746 DSG1Q02413 1049 aa12.41□□□□□ -0.42
VTN-202ENST00000539746 MRPL58Q14197 206 aaKnown RBP12.41□□□□□ -0.42
VTN-202ENST00000539746 PSMD5Q16401 504 aa12.41□□□□□ -0.42
VTN-202ENST00000539746 FAM102AQ5T9C2 384 aaPredicted RBP12.41□□□□□ -0.42
VTN-202ENST00000539746 SLC8B1Q6J4K2 584 aa12.41□□□□□ -0.42
VTN-202ENST00000539746 CCDC149Q6ZUS6 474 aa12.41□□□□□ -0.42
VTN-202ENST00000539746 POLNQ7Z5Q5 900 aa12.41□□□□□ -0.42
VTN-202ENST00000539746 ITIH5Q86UX2 942 aa12.41□□□□□ -0.42
VTN-202ENST00000539746 FAM35AQ86V20 835 aa12.41□□□□□ -0.42
VTN-202ENST00000539746 PASD1Q8IV76 773 aa12.41□□□□□ -0.42
VTN-202ENST00000539746 MAP7D3Q8IWC1 876 aa12.41□□□□□ -0.42
VTN-202ENST00000539746 RHOT1Q8IXI2 618 aa12.41□□□□□ -0.42
VTN-202ENST00000539746 SLC39A11Q8N1S5 342 aa12.41□□□□□ -0.42
VTN-202ENST00000539746 NIPA2Q8N8Q9 360 aa12.41□□□□□ -0.42
VTN-202ENST00000539746 TPCN2Q8NHX9 752 aa12.41□□□□□ -0.42
VTN-202ENST00000539746 TFAP2BQ92481 460 aa12.41□□□□□ -0.42
VTN-202ENST00000539746 RNPC3Q96LT9 517 aaKnown RBP12.41□□□□□ -0.42
VTN-202ENST00000539746 PCDHB18PQ96TA0 734 aa12.41□□□□□ -0.42
VTN-202ENST00000539746 LACRTQ9GZZ8 138 aa12.41□□□□□ -0.42
VTN-202ENST00000539746 DONSONQ9NYP3 566 aa12.41□□□□□ -0.42
VTN-202ENST00000539746 MTRRQ9UBK8 725 aa12.41□□□□□ -0.42
VTN-202ENST00000539746 UXTQ9UBK9 157 aaPredicted RBP12.41□□□□□ -0.42
VTN-202ENST00000539746 MSRAQ9UJ68 235 aa12.41□□□□□ -0.42
VTN-202ENST00000539746 PCDHA11Q9Y5I1 949 aa12.41□□□□□ -0.42
VTN-202ENST00000539746 CEP350Q5VT06 3117 aa12.41□□□□□ -0.42
VTN-202ENST00000539746 TDRD15B5MCY1 1934 aaKnown RBP12.41□□□□□ -0.42
VTN-202ENST00000539746 GRID2IPA4D2P6 1211 aa12.4□□□□□ -0.42
VTN-202ENST00000539746 CAPN9O14815 690 aa12.4□□□□□ -0.42
VTN-202ENST00000539746 PALMO75781 387 aa12.4□□□□□ -0.42
VTN-202ENST00000539746 URI1O94763 535 aaPredicted RBP12.4□□□□□ -0.42
VTN-202ENST00000539746 PROSCO94903 275 aa12.4□□□□□ -0.42
VTN-202ENST00000539746 MCM3P25205 808 aa12.4□□□□□ -0.42
VTN-202ENST00000539746 GBP1P32455 592 aa12.4□□□□□ -0.42
VTN-202ENST00000539746 RDXP35241 583 aaKnown RBP12.4□□□□□ -0.42
VTN-202ENST00000539746 GRIK1P39086 918 aa12.4□□□□□ -0.42
VTN-202ENST00000539746 BRCC3P46736 316 aa12.4□□□□□ -0.42
VTN-202ENST00000539746 KPNA1P52294 538 aaPredicted RBP12.4□□□□□ -0.42
VTN-202ENST00000539746 PTP4A2Q12974 167 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms