RNA–Protein interactions for RNA: ENST00000537965.5

SNHG1-207, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-207ENST00000537965 MRPS17Q9Y2R5 130 aaKnown RBP5.9□□□□□ -1.46
SNHG1-207ENST00000537965 PRG3Q9Y2Y8 225 aaPredicted RBP5.9□□□□□ -1.46
SNHG1-207ENST00000537965 CORINQ9Y5Q5 1042 aa5.9□□□□□ -1.46
SNHG1-207ENST00000537965 NID2Q14112 1375 aa5.9□□□□□ -1.47
SNHG1-207ENST00000537965 EPG5Q9HCE0 2579 aa5.9□□□□□ -1.47
SNHG1-207ENST00000537965 GREB1Q4ZG55 1949 aa5.89□□□□□ -1.47
SNHG1-207ENST00000537965 GPR179Q6PRD1 2367 aa5.89□□□□□ -1.47
SNHG1-207ENST00000537965 CCDC194A0A1B0GVG4 234 aa5.89□□□□□ -1.47
SNHG1-207ENST00000537965 KANSL1LA0AUZ9 987 aa5.89□□□□□ -1.47
SNHG1-207ENST00000537965 MEIS3P2A8K0S8 358 aa5.89□□□□□ -1.47
SNHG1-207ENST00000537965 N4BP1O75113 896 aaKnown RBP5.89□□□□□ -1.47
SNHG1-207ENST00000537965 CDC45O75419 566 aa5.89□□□□□ -1.47
SNHG1-207ENST00000537965 TADA2AO75478 443 aa5.89□□□□□ -1.47
SNHG1-207ENST00000537965 RFPL2O75678 378 aa5.89□□□□□ -1.47
SNHG1-207ENST00000537965 DEXIO95424 95 aa5.89□□□□□ -1.47
SNHG1-207ENST00000537965 DCNP07585 359 aaKnown RBP5.89□□□□□ -1.47
SNHG1-207ENST00000537965 JUNBP17275 347 aaPredicted RBP5.89□□□□□ -1.47
SNHG1-207ENST00000537965 PLCG1P19174 1290 aa5.89□□□□□ -1.47
SNHG1-207ENST00000537965 GARTP22102 1010 aa5.89□□□□□ -1.47
SNHG1-207ENST00000537965 HOXA9P31269 272 aa5.89□□□□□ -1.47
SNHG1-207ENST00000537965 HOXA11P31270 313 aaPredicted RBP5.89□□□□□ -1.47
SNHG1-207ENST00000537965 YWHABP31946 246 aaKnown RBP5.89□□□□□ -1.47
SNHG1-207ENST00000537965 EVCP57679 992 aa5.89□□□□□ -1.47
SNHG1-207ENST00000537965 PTENP60484 403 aa5.89□□□□□ -1.47
SNHG1-207ENST00000537965 FAM160A1Q05DH4 1040 aa5.89□□□□□ -1.47
SNHG1-207ENST00000537965 DSC1Q08554 894 aa5.89□□□□□ -1.47
SNHG1-207ENST00000537965 HTR4Q13639 388 aa5.89□□□□□ -1.47
SNHG1-207ENST00000537965 PPP2R5DQ14738 602 aa5.89□□□□□ -1.47
SNHG1-207ENST00000537965 EPHA7Q15375 998 aa5.89□□□□□ -1.47
SNHG1-207ENST00000537965 NTRK3Q16288 839 aa5.89□□□□□ -1.47
SNHG1-207ENST00000537965 XKR9Q5GH70 373 aa5.89□□□□□ -1.47
SNHG1-207ENST00000537965 ZBTB41Q5SVQ8 909 aa5.89□□□□□ -1.47
SNHG1-207ENST00000537965 LIN9Q5TKA1 542 aa5.89□□□□□ -1.47
SNHG1-207ENST00000537965 PPP4R3AQ6IN85 833 aa5.89□□□□□ -1.47
SNHG1-207ENST00000537965 FUT10Q6P4F1 479 aa5.89□□□□□ -1.47
SNHG1-207ENST00000537965 LILRA6Q6PI73 481 aa5.89□□□□□ -1.47
SNHG1-207ENST00000537965 GET4Q7L5D6 327 aaPredicted RBP5.89□□□□□ -1.47
SNHG1-207ENST00000537965 FERMT3Q86UX7 667 aa5.89□□□□□ -1.47
SNHG1-207ENST00000537965 PALB2Q86YC2 1186 aa5.89□□□□□ -1.47
SNHG1-207ENST00000537965 KSR1Q8IVT5 923 aa5.89□□□□□ -1.47
SNHG1-207ENST00000537965 SLFN12Q8IYM2 578 aa5.89□□□□□ -1.47
SNHG1-207ENST00000537965 RNF168Q8IYW5 571 aaPredicted RBP5.89□□□□□ -1.47
SNHG1-207ENST00000537965 MFSD4AQ8N468 514 aa5.89□□□□□ -1.47
SNHG1-207ENST00000537965 GOLM1Q8NBJ4 401 aa5.89□□□□□ -1.47
SNHG1-207ENST00000537965 DAGLBQ8NCG7 672 aa5.89□□□□□ -1.47
SNHG1-207ENST00000537965 ETNPPLQ8TBG4 499 aa5.89□□□□□ -1.47
SNHG1-207ENST00000537965 RSAD2Q8WXG1 361 aa5.89□□□□□ -1.47
SNHG1-207ENST00000537965 RIN2Q8WYP3 895 aaPredicted RBP5.89□□□□□ -1.47
SNHG1-207ENST00000537965 JAKMIP1Q96N16 626 aaKnown RBP5.89□□□□□ -1.47
SNHG1-207ENST00000537965 MBOAT7Q96N66 472 aa5.89□□□□□ -1.47
SNHG1-207ENST00000537965 MYADMQ96S97 322 aa5.89□□□□□ -1.47
SNHG1-207ENST00000537965 GAD1Q99259 594 aa5.89□□□□□ -1.47
SNHG1-207ENST00000537965 DPH2Q9BQC3 489 aaPredicted RBP5.89□□□□□ -1.47
SNHG1-207ENST00000537965 AGXT2Q9BYV1 514 aa5.89□□□□□ -1.47
SNHG1-207ENST00000537965 CSRNP2Q9H175 543 aa5.89□□□□□ -1.47
SNHG1-207ENST00000537965 ZSWIM4Q9H7M6 989 aa5.89□□□□□ -1.47
SNHG1-207ENST00000537965 MBNL3Q9NUK0 354 aaKnown RBP5.89□□□□□ -1.47
SNHG1-207ENST00000537965 SPATA6Q9NWH7 488 aaPredicted RBP5.89□□□□□ -1.47
SNHG1-207ENST00000537965 DLGAP2Q9P1A6 1054 aa5.89□□□□□ -1.47
SNHG1-207ENST00000537965 VPS54Q9P1Q0 977 aa5.89□□□□□ -1.47
SNHG1-207ENST00000537965 ADAMTS6Q9UKP5 1117 aa5.89□□□□□ -1.47
SNHG1-207ENST00000537965 ADAM28Q9UKQ2 775 aa5.89□□□□□ -1.47
SNHG1-207ENST00000537965 CDH7Q9ULB5 785 aa5.89□□□□□ -1.47
SNHG1-207ENST00000537965 IPPQ9Y573 584 aa5.89□□□□□ -1.47
SNHG1-207ENST00000537965 PCDHGA2Q9Y5H1 932 aa5.89□□□□□ -1.47
SNHG1-207ENST00000537965 CAPN6Q9Y6Q1 641 aa5.89□□□□□ -1.47
SNHG1-207ENST00000537965 R4GN57 208 aa5.89□□□□□ -1.47
SNHG1-207ENST00000537965 CACNA1GO43497 2377 aa5.89□□□□□ -1.47
SNHG1-207ENST00000537965 SF3B1O75533 1304 aaKnown RBP eCLIP5.89□□□□□ -1.478e-10■■■■■ 30
SNHG1-207ENST00000537965 MAP1BP46821 2468 aaKnown RBP5.89□□□□□ -1.47
SNHG1-207ENST00000537965 NCOR2Q9Y618 2525 aa5.89□□□□□ -1.47
SNHG1-207ENST00000537965 PI4KAP42356 2102 aa5.89□□□□□ -1.47
SNHG1-207ENST00000537965 TMEM150BA6NC51 233 aa5.88□□□□□ -1.47
SNHG1-207ENST00000537965 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.88□□□□□ -1.47
SNHG1-207ENST00000537965 INO80B-WBP1J3KQ70 363 aa5.88□□□□□ -1.47
SNHG1-207ENST00000537965 TGM5O43548 720 aa5.88□□□□□ -1.47
SNHG1-207ENST00000537965 TBC1D4O60343 1298 aa5.88□□□□□ -1.47
SNHG1-207ENST00000537965 CDKL5O76039 1030 aa5.88□□□□□ -1.47
SNHG1-207ENST00000537965 REC8O95072 547 aa5.88□□□□□ -1.47
SNHG1-207ENST00000537965 TDP2O95551 362 aa5.88□□□□□ -1.47
SNHG1-207ENST00000537965 EFEMP2O95967 443 aa5.88□□□□□ -1.47
SNHG1-207ENST00000537965 RNASE1P07998 156 aaKnown RBP5.88□□□□□ -1.47
SNHG1-207ENST00000537965 POU2F2P09086 479 aa5.88□□□□□ -1.47
SNHG1-207ENST00000537965 SPATA31D3P0C874 917 aa5.88□□□□□ -1.47
SNHG1-207ENST00000537965 ZNF16P17020 682 aaPredicted RBP5.88□□□□□ -1.47
SNHG1-207ENST00000537965 RPS6KB1P23443 525 aa5.88□□□□□ -1.47
SNHG1-207ENST00000537965 PDIA3P30101 505 aaKnown RBP5.88□□□□□ -1.47
SNHG1-207ENST00000537965 MLH1P40692 756 aa5.88□□□□□ -1.47
SNHG1-207ENST00000537965 KIR3DL1P43629 444 aa5.88□□□□□ -1.47
SNHG1-207ENST00000537965 NPEPPSP55786 919 aa5.88□□□□□ -1.47
SNHG1-207ENST00000537965 GRIK3Q13003 919 aa5.88□□□□□ -1.47
SNHG1-207ENST00000537965 MPP2Q14168 576 aa5.88□□□□□ -1.47
SNHG1-207ENST00000537965 EMC2Q15006 297 aa5.88□□□□□ -1.47
SNHG1-207ENST00000537965 MLF2Q15773 248 aaPredicted RBP5.88□□□□□ -1.47
SNHG1-207ENST00000537965 SLC44A4Q53GD3 710 aa5.88□□□□□ -1.47
SNHG1-207ENST00000537965 PPM1LQ5SGD2 360 aa5.88□□□□□ -1.47
SNHG1-207ENST00000537965 SNAP47Q5SQN1 464 aa5.88□□□□□ -1.47
SNHG1-207ENST00000537965 UBXN11Q5T124 520 aa5.88□□□□□ -1.47
SNHG1-207ENST00000537965 PLA2G4FQ68DD2 849 aa5.88□□□□□ -1.47
SNHG1-207ENST00000537965 SLC27A1Q6PCB7 646 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms