RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 PCDH9Q9HC56 1237 aa16.46■□□□□ 0.23
MKS1-204ENST00000537529 GPD1P21695 349 aa16.46■□□□□ 0.22
MKS1-204ENST00000537529 PCK1P35558 622 aa16.46■□□□□ 0.22
MKS1-204ENST00000537529 ZNF143P52747 638 aaPredicted RBP16.46■□□□□ 0.22
MKS1-204ENST00000537529 IFI35P80217 286 aaPredicted RBP16.46■□□□□ 0.22
MKS1-204ENST00000537529 PLCB3Q01970 1234 aa16.46■□□□□ 0.22
MKS1-204ENST00000537529 KYNUQ16719 465 aa16.46■□□□□ 0.22
MKS1-204ENST00000537529 TNFAIP8L3Q5GJ75 292 aa16.46■□□□□ 0.22
MKS1-204ENST00000537529 PRAMEF19Q5SWL8 479 aa16.46■□□□□ 0.22
MKS1-204ENST00000537529 KCTD6Q8NC69 237 aa16.46■□□□□ 0.22
MKS1-204ENST00000537529 SLC35B2Q8TB61 432 aa16.46■□□□□ 0.22
MKS1-204ENST00000537529 CNPY3Q9BT09 278 aa16.46■□□□□ 0.22
MKS1-204ENST00000537529 TRIM6Q9C030 488 aaPredicted RBP16.46■□□□□ 0.22
MKS1-204ENST00000537529 SNX9Q9Y5X1 595 aa16.46■□□□□ 0.22
MKS1-204ENST00000537529 UTRNP46939 3433 aa16.45■□□□□ 0.22
MKS1-204ENST00000537529 SGK1O00141 431 aa16.45■□□□□ 0.22
MKS1-204ENST00000537529 TCEA3O75764 348 aa16.45■□□□□ 0.22
MKS1-204ENST00000537529 TRUB2O95900 331 aaKnown RBP16.45■□□□□ 0.22
MKS1-204ENST00000537529 SETSIPP0DME0 302 aa16.45■□□□□ 0.22
MKS1-204ENST00000537529 MIPP30301 263 aa16.45■□□□□ 0.22
MKS1-204ENST00000537529 PSEN2P49810 448 aa16.45■□□□□ 0.22
MKS1-204ENST00000537529 GPS1Q13098 491 aa16.45■□□□□ 0.22
MKS1-204ENST00000537529 ZBTB6Q15916 424 aa16.45■□□□□ 0.22
MKS1-204ENST00000537529 LONRF1Q17RB8 773 aa16.45■□□□□ 0.22
MKS1-204ENST00000537529 KCNT1Q5JUK3 1230 aa16.45■□□□□ 0.22
MKS1-204ENST00000537529 OR6B2Q6IFH4 312 aa16.45■□□□□ 0.22
MKS1-204ENST00000537529 MICALCLQ6ZW33 695 aa16.45■□□□□ 0.22
MKS1-204ENST00000537529 PRUNE1Q86TP1 453 aa16.45■□□□□ 0.22
MKS1-204ENST00000537529 ZMAT2Q96NC0 199 aaKnown RBP16.45■□□□□ 0.22
MKS1-204ENST00000537529 CDHR5Q9HBB8 845 aa16.45■□□□□ 0.22
MKS1-204ENST00000537529 CNTN3Q9P232 1028 aa16.45■□□□□ 0.22
MKS1-204ENST00000537529 TUBGCP4Q9UGJ1 667 aa16.45■□□□□ 0.22
MKS1-204ENST00000537529 TPX2Q9ULW0 747 aaKnown RBP16.45■□□□□ 0.22
MKS1-204ENST00000537529 USP18Q9UMW8 372 aa16.45■□□□□ 0.22
MKS1-204ENST00000537529 E5RJQ4 531 aa16.44■□□□□ 0.22
MKS1-204ENST00000537529 CST8O60676 142 aa16.44■□□□□ 0.22
MKS1-204ENST00000537529 DYNLT1P63172 113 aa16.44■□□□□ 0.22
MKS1-204ENST00000537529 MORF4L2Q15014 288 aa16.44■□□□□ 0.22
MKS1-204ENST00000537529 OLFML2BQ68BL8 750 aa16.44■□□□□ 0.22
MKS1-204ENST00000537529 FAM183BPQ6ZVS7 135 aa16.44■□□□□ 0.22
MKS1-204ENST00000537529 XPO6Q96QU8 1125 aaKnown RBP16.44■□□□□ 0.22
MKS1-204ENST00000537529 CCDC77Q9BR77 488 aa16.44■□□□□ 0.22
MKS1-204ENST00000537529 MRPL45Q9BRJ2 306 aaKnown RBP16.44■□□□□ 0.22
MKS1-204ENST00000537529 ADAM7Q9H2U9 754 aa16.44■□□□□ 0.22
MKS1-204ENST00000537529 PCSK1NQ9UHG2 260 aa16.44■□□□□ 0.22
MKS1-204ENST00000537529 RECQL4O94761 1208 aa16.44■□□□□ 0.22
MKS1-204ENST00000537529 ITGBL1O95965 494 aaPredicted RBP16.44■□□□□ 0.22
MKS1-204ENST00000537529 PFKMP08237 780 aa16.44■□□□□ 0.22
MKS1-204ENST00000537529 ABHD2P08910 425 aa16.44■□□□□ 0.22
MKS1-204ENST00000537529 ZNF865P0CJ78 1059 aaPredicted RBP16.44■□□□□ 0.22
MKS1-204ENST00000537529 CHN1P15882 459 aa16.44■□□□□ 0.22
MKS1-204ENST00000537529 RDXP35241 583 aaKnown RBP16.44■□□□□ 0.22
MKS1-204ENST00000537529 CPT1AP50416 773 aa16.44■□□□□ 0.22
MKS1-204ENST00000537529 SNX16P57768 344 aa16.44■□□□□ 0.22
MKS1-204ENST00000537529 OTUD4Q01804 1114 aaKnown RBP16.44■□□□□ 0.22
MKS1-204ENST00000537529 RFX6Q8HWS3 928 aa16.44■□□□□ 0.22
MKS1-204ENST00000537529 GLIS1Q8NBF1 620 aa16.44■□□□□ 0.22
MKS1-204ENST00000537529 CMASQ8NFW8 434 aaPredicted RBP16.44■□□□□ 0.22
MKS1-204ENST00000537529 MDM1Q8TC05 714 aa16.44■□□□□ 0.22
MKS1-204ENST00000537529 ACTL9Q8TC94 416 aa16.44■□□□□ 0.22
MKS1-204ENST00000537529 HSPH1Q92598 858 aa16.44■□□□□ 0.22
MKS1-204ENST00000537529 PWWP2AQ96N64 755 aa16.44■□□□□ 0.22
MKS1-204ENST00000537529 RBM15Q96T37 977 aaKnown RBP eCLIP16.44■□□□□ 0.22
MKS1-204ENST00000537529 NXF3Q9H4D5 531 aaKnown RBP16.44■□□□□ 0.22
MKS1-204ENST00000537529 HESX1Q9UBX0 185 aa16.44■□□□□ 0.22
MKS1-204ENST00000537529 UBQLN1Q9UMX0 589 aaKnown RBP16.44■□□□□ 0.22
MKS1-204ENST00000537529 SHOC2Q9UQ13 582 aa16.44■□□□□ 0.22
MKS1-204ENST00000537529 ATXN2Q99700 1313 aaKnown RBP16.43■□□□□ 0.22
MKS1-204ENST00000537529 CITO14578 2027 aa16.43■□□□□ 0.22
MKS1-204ENST00000537529 C2CD4BA6NLJ0 364 aa16.43■□□□□ 0.22
MKS1-204ENST00000537529 MYO1CO00159 1063 aa16.43■□□□□ 0.22
MKS1-204ENST00000537529 PPEF2O14830 753 aa16.43■□□□□ 0.22
MKS1-204ENST00000537529 ZSCAN5DPP0CG00 497 aa16.43■□□□□ 0.22
MKS1-204ENST00000537529 MAGEA4P43358 317 aa16.43■□□□□ 0.22
MKS1-204ENST00000537529 PPARDQ03181 441 aa16.43■□□□□ 0.22
MKS1-204ENST00000537529 STAT4Q14765 748 aa16.43■□□□□ 0.22
MKS1-204ENST00000537529 ERMARDQ5T6L9 678 aa16.43■□□□□ 0.22
MKS1-204ENST00000537529 ACOT1Q86TX2 421 aa16.43■□□□□ 0.22
MKS1-204ENST00000537529 UNC93AQ86WB7 457 aa16.43■□□□□ 0.22
MKS1-204ENST00000537529 C12orf29Q8N999 325 aa16.43■□□□□ 0.22
MKS1-204ENST00000537529 DNAJB3Q8WWF6 145 aa16.43■□□□□ 0.22
MKS1-204ENST00000537529 RXFP2Q8WXD0 754 aa16.43■□□□□ 0.22
MKS1-204ENST00000537529 C18orf25Q96B23 403 aaPredicted RBP16.43■□□□□ 0.22
MKS1-204ENST00000537529 TTC25Q96NG3 672 aa16.43■□□□□ 0.22
MKS1-204ENST00000537529 TSPAN18Q96SJ8 248 aa16.43■□□□□ 0.22
MKS1-204ENST00000537529 TMEM121Q9BTD3 319 aa16.43■□□□□ 0.22
MKS1-204ENST00000537529 AP5M1Q9H0R1 490 aa16.43■□□□□ 0.22
MKS1-204ENST00000537529 CXCL16Q9H2A7 254 aa16.43■□□□□ 0.22
MKS1-204ENST00000537529 RSAD1Q9HA92 442 aa16.43■□□□□ 0.22
MKS1-204ENST00000537529 FLRT1Q9NZU1 646 aa16.43■□□□□ 0.22
MKS1-204ENST00000537529 PIN4Q9Y237 131 aaKnown RBP16.43■□□□□ 0.22
MKS1-204ENST00000537529 HAS3O00219 553 aa16.42■□□□□ 0.22
MKS1-204ENST00000537529 TULP2O00295 520 aa16.42■□□□□ 0.22
MKS1-204ENST00000537529 CD4P01730 458 aa16.42■□□□□ 0.22
MKS1-204ENST00000537529 MYL3P08590 195 aa16.42■□□□□ 0.22
MKS1-204ENST00000537529 ETS1P14921 441 aa16.42■□□□□ 0.22
MKS1-204ENST00000537529 PDGFRAP16234 1089 aa16.42■□□□□ 0.22
MKS1-204ENST00000537529 DESP17661 470 aa16.42■□□□□ 0.22
MKS1-204ENST00000537529 CORO7P57737 925 aa16.42■□□□□ 0.22
MKS1-204ENST00000537529 PPP1R26Q5T8A7 1209 aaPredicted RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms