RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 ZBTB45Q96K62 511 aaPredicted RBP8.98□□□□□ -0.97
CLIP1-206ENST00000535290 ZCWPW1Q9H0M4 648 aa8.98□□□□□ -0.97
CLIP1-206ENST00000535290 TTC12Q9H892 705 aaPredicted RBP8.98□□□□□ -0.97
CLIP1-206ENST00000535290 CALCOCO1Q9P1Z2 691 aa8.98□□□□□ -0.97
CLIP1-206ENST00000535290 DAXXQ9UER7 740 aaPredicted RBP8.98□□□□□ -0.97
CLIP1-206ENST00000535290 DNMT3LQ9UJW3 386 aa8.98□□□□□ -0.97
CLIP1-206ENST00000535290 MAGED2Q9UNF1 606 aaPredicted RBP8.98□□□□□ -0.97
CLIP1-206ENST00000535290 SPTAN1Q13813 2472 aaKnown RBP8.98□□□□□ -0.97
CLIP1-206ENST00000535290 TEX51A0A1B0GUA7 166 aa8.97□□□□□ -0.97
CLIP1-206ENST00000535290 PLK4O00444 970 aa8.97□□□□□ -0.97
CLIP1-206ENST00000535290 MED24O75448 989 aa8.97□□□□□ -0.97
CLIP1-206ENST00000535290 DEXIO95424 95 aa8.97□□□□□ -0.97
CLIP1-206ENST00000535290 HMGB1P09429 215 aaKnown RBP8.97□□□□□ -0.97
CLIP1-206ENST00000535290 GABRG2P18507 467 aa8.97□□□□□ -0.97
CLIP1-206ENST00000535290 TXKP42681 527 aa8.97□□□□□ -0.97
CLIP1-206ENST00000535290 KRT32Q14532 448 aa8.97□□□□□ -0.97
CLIP1-206ENST00000535290 SMAD1Q15797 465 aaKnown RBP8.97□□□□□ -0.97
CLIP1-206ENST00000535290 ZBTB6Q15916 424 aa8.97□□□□□ -0.97
CLIP1-206ENST00000535290 CCDC157Q569K6 752 aa8.97□□□□□ -0.97
CLIP1-206ENST00000535290 LRRC69Q6ZNQ3 347 aa8.97□□□□□ -0.97
CLIP1-206ENST00000535290 RGL4Q8IZJ4 473 aa8.97□□□□□ -0.97
CLIP1-206ENST00000535290 RHBDD1Q8TEB9 315 aa8.97□□□□□ -0.97
CLIP1-206ENST00000535290 ZNF419Q96HQ0 510 aaPredicted RBP8.97□□□□□ -0.97
CLIP1-206ENST00000535290 SENP8Q96LD8 212 aa8.97□□□□□ -0.97
CLIP1-206ENST00000535290 YTHDC1Q96MU7 727 aaKnown RBP8.97□□□□□ -0.97
CLIP1-206ENST00000535290 KIF2CQ99661 725 aa8.97□□□□□ -0.97
CLIP1-206ENST00000535290 NAP1L4Q99733 375 aaKnown RBP8.97□□□□□ -0.97
CLIP1-206ENST00000535290 TCHPQ9BT92 498 aa8.97□□□□□ -0.97
CLIP1-206ENST00000535290 MRPL4Q9BYD3 311 aaKnown RBP8.97□□□□□ -0.97
CLIP1-206ENST00000535290 SEMA4CQ9C0C4 833 aa8.97□□□□□ -0.97
CLIP1-206ENST00000535290 TRPC7Q9HCX4 862 aa8.97□□□□□ -0.97
CLIP1-206ENST00000535290 GJB4Q9NTQ9 266 aa8.97□□□□□ -0.97
CLIP1-206ENST00000535290 FNDC3AQ9Y2H6 1198 aaKnown RBP8.97□□□□□ -0.97
CLIP1-206ENST00000535290 MYO16Q9Y6X6 1858 aa8.97□□□□□ -0.97
CLIP1-206ENST00000535290 MGAQ8IWI9 3026 aa8.97□□□□□ -0.97
CLIP1-206ENST00000535290 KIAA1549LQ6ZVL6 1849 aa8.96□□□□□ -0.97
CLIP1-206ENST00000535290 HELZP42694 1942 aaKnown RBP8.96□□□□□ -0.97
CLIP1-206ENST00000535290 A0A0A0MRY4 1105 aa8.96□□□□□ -0.98
CLIP1-206ENST00000535290 ARHGEF35A5YM69 484 aa8.96□□□□□ -0.98
CLIP1-206ENST00000535290 B8ZZF3 427 aa8.96□□□□□ -0.98
CLIP1-206ENST00000535290 CILPO75339 1184 aa8.96□□□□□ -0.98
CLIP1-206ENST00000535290 KAT7O95251 611 aa8.96□□□□□ -0.98
CLIP1-206ENST00000535290 WISP1O95388 367 aa8.96□□□□□ -0.98
CLIP1-206ENST00000535290 NFATC1O95644 943 aa8.96□□□□□ -0.98
CLIP1-206ENST00000535290 CYP17A1P05093 508 aa8.96□□□□□ -0.98
CLIP1-206ENST00000535290 CKMP06732 381 aa8.96□□□□□ -0.98
CLIP1-206ENST00000535290 USP17L7P0C7H9 530 aa8.96□□□□□ -0.98
CLIP1-206ENST00000535290 CXCL8P10145 99 aa8.96□□□□□ -0.98
CLIP1-206ENST00000535290 HLA-EP13747 358 aa8.96□□□□□ -0.98
CLIP1-206ENST00000535290 LILRA4P59901 499 aa8.96□□□□□ -0.98
CLIP1-206ENST00000535290 ZXDBP98169 803 aa8.96□□□□□ -0.98
CLIP1-206ENST00000535290 SEMG2Q02383 582 aa8.96□□□□□ -0.98
CLIP1-206ENST00000535290 MYO1EQ12965 1108 aa8.96□□□□□ -0.98
CLIP1-206ENST00000535290 CALCRLQ16602 461 aa8.96□□□□□ -0.98
CLIP1-206ENST00000535290 HSF5Q4G112 596 aaPredicted RBP8.96□□□□□ -0.98
CLIP1-206ENST00000535290 TAF1BQ53T94 588 aaPredicted RBP8.96□□□□□ -0.98
CLIP1-206ENST00000535290 MPZL3Q6UWV2 235 aa8.96□□□□□ -0.98
CLIP1-206ENST00000535290 DHRS13Q6UX07 377 aa8.96□□□□□ -0.98
CLIP1-206ENST00000535290 DBX2Q6ZNG2 339 aa8.96□□□□□ -0.98
CLIP1-206ENST00000535290 C12orf40Q86WS4 652 aa8.96□□□□□ -0.98
CLIP1-206ENST00000535290 FMNL3Q8IVF7 1028 aa8.96□□□□□ -0.98
CLIP1-206ENST00000535290 FBXL16Q8N461 479 aa8.96□□□□□ -0.98
CLIP1-206ENST00000535290 ARL14EPQ8N8R7 260 aaPredicted RBP8.96□□□□□ -0.98
CLIP1-206ENST00000535290 IFT74Q96LB3 600 aa8.96□□□□□ -0.98
CLIP1-206ENST00000535290 PNKPQ96T60 521 aa8.96□□□□□ -0.98
CLIP1-206ENST00000535290 CDC6Q99741 560 aa8.96□□□□□ -0.98
CLIP1-206ENST00000535290 AGXT2Q9BYV1 514 aa8.96□□□□□ -0.98
CLIP1-206ENST00000535290 ZDHHC5Q9C0B5 715 aa8.96□□□□□ -0.98
CLIP1-206ENST00000535290 FAM124BQ9H5Z6 455 aaPredicted RBP8.96□□□□□ -0.98
CLIP1-206ENST00000535290 GAREM1Q9H706 876 aa8.96□□□□□ -0.98
CLIP1-206ENST00000535290 CD93Q9NPY3 652 aa8.96□□□□□ -0.98
CLIP1-206ENST00000535290 TM7SF3Q9NS93 570 aa8.96□□□□□ -0.98
CLIP1-206ENST00000535290 ABI2Q9NYB9 513 aaPredicted RBP8.96□□□□□ -0.98
CLIP1-206ENST00000535290 GCNT4Q9P109 453 aa8.96□□□□□ -0.98
CLIP1-206ENST00000535290 CYP8B1Q9UNU6 501 aa8.96□□□□□ -0.98
CLIP1-206ENST00000535290 BTBD3Q9Y2F9 522 aa8.96□□□□□ -0.98
CLIP1-206ENST00000535290 MYO9AB2RTY4 2548 aa8.95□□□□□ -0.98
CLIP1-206ENST00000535290 TRAV19A0A0A6YYK7 116 aa8.95□□□□□ -0.98
CLIP1-206ENST00000535290 C2orf78A6NCI8 922 aa8.95□□□□□ -0.98
CLIP1-206ENST00000535290 MYMKA6NI61 221 aa8.95□□□□□ -0.98
CLIP1-206ENST00000535290 CCDC169A6NNP5 214 aa8.95□□□□□ -0.98
CLIP1-206ENST00000535290 E9PAM4 449 aa8.95□□□□□ -0.98
CLIP1-206ENST00000535290 WNT7AO00755 349 aa8.95□□□□□ -0.98
CLIP1-206ENST00000535290 SCAMP3O14828 347 aaKnown RBP8.95□□□□□ -0.98
CLIP1-206ENST00000535290 RRP8O43159 456 aaKnown RBP8.95□□□□□ -0.98
CLIP1-206ENST00000535290 APODP05090 189 aa8.95□□□□□ -0.98
CLIP1-206ENST00000535290 ODC1P11926 461 aa8.95□□□□□ -0.98
CLIP1-206ENST00000535290 GNSP15586 552 aa8.95□□□□□ -0.98
CLIP1-206ENST00000535290 NPTX2P47972 431 aa8.95□□□□□ -0.98
CLIP1-206ENST00000535290 CLDN6P56747 220 aa8.95□□□□□ -0.98
CLIP1-206ENST00000535290 EVCP57679 992 aa8.95□□□□□ -0.98
CLIP1-206ENST00000535290 BNC1Q01954 994 aa8.95□□□□□ -0.98
CLIP1-206ENST00000535290 PTPRNQ16849 979 aa8.95□□□□□ -0.98
CLIP1-206ENST00000535290 ADGRG2Q8IZP9 1017 aa8.95□□□□□ -0.98
CLIP1-206ENST00000535290 FAM177A1Q8N128 213 aaPredicted RBP8.95□□□□□ -0.98
CLIP1-206ENST00000535290 ERLEC1Q96DZ1 483 aa8.95□□□□□ -0.98
CLIP1-206ENST00000535290 JAKMIP1Q96N16 626 aaKnown RBP8.95□□□□□ -0.98
CLIP1-206ENST00000535290 PI4K2AQ9BTU6 479 aa8.95□□□□□ -0.98
CLIP1-206ENST00000535290 TMEM206Q9H813 350 aa8.95□□□□□ -0.98
CLIP1-206ENST00000535290 TMLHEQ9NVH6 421 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms