RNA–Protein interactions for RNA: ENST00000533690.5

ATM-221, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 3,354 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-221ENST00000533690 NFIBO00712 420 aa4.13□□□□□ -1.75
ATM-221ENST00000533690 CYP26A1O43174 497 aa4.13□□□□□ -1.75
ATM-221ENST00000533690 DENRO43583 198 aaKnown RBP4.13□□□□□ -1.75
ATM-221ENST00000533690 CTNND1O60716 968 aaKnown RBP4.13□□□□□ -1.75
ATM-221ENST00000533690 MAFO75444 373 aaPredicted RBP4.13□□□□□ -1.75
ATM-221ENST00000533690 SBK3P0C264 359 aa4.13□□□□□ -1.75
ATM-221ENST00000533690 CNGA1P29973 690 aa4.13□□□□□ -1.75
ATM-221ENST00000533690 GRIA2P42262 883 aa4.13□□□□□ -1.75
ATM-221ENST00000533690 GDF10P55107 478 aa4.13□□□□□ -1.75
ATM-221ENST00000533690 IRX1P78414 480 aaPredicted RBP4.13□□□□□ -1.75
ATM-221ENST00000533690 CDK16Q00536 496 aa4.13□□□□□ -1.75
ATM-221ENST00000533690 FAAP100Q0VG06 881 aa4.13□□□□□ -1.75
ATM-221ENST00000533690 CBX2Q14781 532 aaPredicted RBP4.13□□□□□ -1.75
ATM-221ENST00000533690 OGFRL1Q5TC84 451 aaPredicted RBP4.13□□□□□ -1.75
ATM-221ENST00000533690 ANKRD22Q5VYY1 191 aa4.13□□□□□ -1.75
ATM-221ENST00000533690 CCDC121Q6ZUS5 278 aa4.13□□□□□ -1.75
ATM-221ENST00000533690 MARK2Q7KZI7 788 aaKnown RBP4.13□□□□□ -1.75
ATM-221ENST00000533690 NET1Q7Z628 596 aaPredicted RBP4.13□□□□□ -1.75
ATM-221ENST00000533690 GALNT7Q86SF2 657 aa4.13□□□□□ -1.75
ATM-221ENST00000533690 VPS36Q86VN1 386 aa4.13□□□□□ -1.75
ATM-221ENST00000533690 PLPP6Q8IY26 295 aa4.13□□□□□ -1.75
ATM-221ENST00000533690 GALNT15Q8N3T1 639 aa4.13□□□□□ -1.75
ATM-221ENST00000533690 FLAD1Q8NFF5 587 aa4.13□□□□□ -1.75
ATM-221ENST00000533690 FEZF2Q8TBJ5 459 aa4.13□□□□□ -1.75
ATM-221ENST00000533690 PIGOQ8TEQ8 1089 aa4.13□□□□□ -1.75
ATM-221ENST00000533690 SLC39A7Q92504 469 aa4.13□□□□□ -1.75
ATM-221ENST00000533690 RPGRQ92834 1020 aaKnown RBP4.13□□□□□ -1.75
ATM-221ENST00000533690 ALKBH8Q96BT7 664 aaKnown RBP4.13□□□□□ -1.75
ATM-221ENST00000533690 PRR11Q96HE9 360 aaPredicted RBP4.13□□□□□ -1.75
ATM-221ENST00000533690 APOPT1Q96IL0 206 aa4.13□□□□□ -1.75
ATM-221ENST00000533690 SERAC1Q96JX3 654 aa4.13□□□□□ -1.75
ATM-221ENST00000533690 SLX1AQ9BQ83 275 aa4.13□□□□□ -1.75
ATM-221ENST00000533690 ZNF577Q9BSK1 485 aa4.13□□□□□ -1.75
ATM-221ENST00000533690 FRMD8Q9BZ67 464 aaPredicted RBP4.13□□□□□ -1.75
ATM-221ENST00000533690 GLIS2Q9BZE0 524 aaPredicted RBP4.13□□□□□ -1.75
ATM-221ENST00000533690 C20orf27Q9GZN8 174 aa4.13□□□□□ -1.75
ATM-221ENST00000533690 C10orf88Q9H8K7 445 aa4.13□□□□□ -1.75
ATM-221ENST00000533690 GBA2Q9HCG7 927 aaPredicted RBP4.13□□□□□ -1.75
ATM-221ENST00000533690 UBE2TQ9NPD8 197 aaPredicted RBP4.13□□□□□ -1.75
ATM-221ENST00000533690 TOMM22Q9NS69 142 aa4.13□□□□□ -1.75
ATM-221ENST00000533690 FGFR1OP2Q9NVK5 253 aa4.13□□□□□ -1.75
ATM-221ENST00000533690 DNAJC28Q9NX36 388 aa4.13□□□□□ -1.75
ATM-221ENST00000533690 HSFX1Q9UBD0 423 aa4.13□□□□□ -1.75
ATM-221ENST00000533690 ZNF330Q9Y3S2 320 aaPredicted RBP4.13□□□□□ -1.75
ATM-221ENST00000533690 NUB1Q9Y5A7 615 aa4.13□□□□□ -1.75
ATM-221ENST00000533690 SCINQ9Y6U3 715 aa4.13□□□□□ -1.75
ATM-221ENST00000533690 COL4A3Q01955 1670 aa4.13□□□□□ -1.75
ATM-221ENST00000533690 CASP8AP2Q9UKL3 1982 aa4.13□□□□□ -1.75
ATM-221ENST00000533690 NUP210LQ5VU65 1888 aa4.13□□□□□ -1.75
ATM-221ENST00000533690 DENND4AQ7Z401 1863 aa4.13□□□□□ -1.75
ATM-221ENST00000533690 VWA5AO00534 786 aa4.13□□□□□ -1.75
ATM-221ENST00000533690 TRDMT1O14717 391 aaKnown RBP4.13□□□□□ -1.75
ATM-221ENST00000533690 GSC2O15499 205 aa4.13□□□□□ -1.75
ATM-221ENST00000533690 LRCH4O75427 683 aa4.13□□□□□ -1.75
ATM-221ENST00000533690 GCATO75600 419 aa4.13□□□□□ -1.75
ATM-221ENST00000533690 GH2P01242 217 aa4.13□□□□□ -1.75
ATM-221ENST00000533690 DLATP10515 647 aaKnown RBP4.13□□□□□ -1.75
ATM-221ENST00000533690 GLDCP23378 1020 aa4.13□□□□□ -1.75
ATM-221ENST00000533690 MAGEA4P43358 317 aa4.13□□□□□ -1.75
ATM-221ENST00000533690 MXI1P50539 228 aa4.13□□□□□ -1.75
ATM-221ENST00000533690 RAB27AP51159 221 aa4.13□□□□□ -1.75
ATM-221ENST00000533690 ACTR3P61158 418 aa4.13□□□□□ -1.75
ATM-221ENST00000533690 NFX1Q12986 1120 aaKnown RBP4.13□□□□□ -1.75
ATM-221ENST00000533690 STRN3Q13033 797 aa4.13□□□□□ -1.75
ATM-221ENST00000533690 PTK2BQ14289 1009 aa4.13□□□□□ -1.75
ATM-221ENST00000533690 TBCCQ15814 346 aa4.13□□□□□ -1.75
ATM-221ENST00000533690 LONRF1Q17RB8 773 aa4.13□□□□□ -1.75
ATM-221ENST00000533690 KRT71Q3SY84 523 aa4.13□□□□□ -1.75
ATM-221ENST00000533690 TDRD12Q587J7 1177 aaKnown RBP4.13□□□□□ -1.75
ATM-221ENST00000533690 AFMIDQ63HM1 303 aa4.13□□□□□ -1.75
ATM-221ENST00000533690 AAGABQ6PD74 315 aa4.13□□□□□ -1.75
ATM-221ENST00000533690 RINLQ6ZS11 566 aa4.13□□□□□ -1.75
ATM-221ENST00000533690 RNF135Q8IUD6 432 aa4.13□□□□□ -1.75
ATM-221ENST00000533690 CNTN4Q8IWV2 1026 aa4.13□□□□□ -1.75
ATM-221ENST00000533690 CDAN1Q8IWY9 1227 aa4.13□□□□□ -1.75
ATM-221ENST00000533690 FAM178BQ8IXR5 827 aa4.13□□□□□ -1.75
ATM-221ENST00000533690 CCDC63Q8NA47 563 aa4.13□□□□□ -1.75
ATM-221ENST00000533690 ARHGEF2Q92974 986 aaKnown RBP4.13□□□□□ -1.75
ATM-221ENST00000533690 CDK5RAP3Q96JB5 506 aa4.13□□□□□ -1.75
ATM-221ENST00000533690 TBC1D10AQ9BXI6 508 aa4.13□□□□□ -1.75
ATM-221ENST00000533690 ZNF408Q9H9D4 720 aa4.13□□□□□ -1.75
ATM-221ENST00000533690 ACP6Q9NPH0 428 aa4.13□□□□□ -1.75
ATM-221ENST00000533690 TOPORSQ9NS56 1045 aaPredicted RBP4.13□□□□□ -1.75
ATM-221ENST00000533690 OSER1Q9NX31 292 aa4.13□□□□□ -1.75
ATM-221ENST00000533690 KCNK4Q9NYG8 393 aa4.13□□□□□ -1.75
ATM-221ENST00000533690 ZNF212Q9UDV6 495 aa4.13□□□□□ -1.75
ATM-221ENST00000533690 TRIM33Q9UPN9 1127 aa4.13□□□□□ -1.75
ATM-221ENST00000533690 EXOC7Q9UPT5 735 aa4.13□□□□□ -1.75
ATM-221ENST00000533690 FRMD4BQ9Y2L6 1034 aa4.13□□□□□ -1.75
ATM-221ENST00000533690 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.13□□□□□ -1.75
ATM-221ENST00000533690 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.13□□□□□ -1.75
ATM-221ENST00000533690 IVNS1ABPQ9Y6Y0 642 aa4.13□□□□□ -1.75
ATM-221ENST00000533690 GOLGA6L10A0A0M3HER8 536 aa4.13□□□□□ -1.75
ATM-221ENST00000533690 GSTTP1A0A1W2PQM5 241 aa4.13□□□□□ -1.75
ATM-221ENST00000533690 TCRBV7S3A2A0A539 114 aa4.13□□□□□ -1.75
ATM-221ENST00000533690 RASA4BC9J798 803 aa4.13□□□□□ -1.75
ATM-221ENST00000533690 MDM4O15151 490 aa4.13□□□□□ -1.75
ATM-221ENST00000533690 RASA4O43374 803 aa4.13□□□□□ -1.75
ATM-221ENST00000533690 FBXO21O94952 628 aa4.13□□□□□ -1.75
ATM-221ENST00000533690 FAM163BP0C2L3 166 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms