RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 ITIH5Q86UX2 942 aa11.92□□□□□ -0.5
TRAPPC4-211ENST00000533012 FAM71AQ8IYT1 594 aa11.92□□□□□ -0.5
TRAPPC4-211ENST00000533012 TTC9BQ8N6N2 239 aa11.92□□□□□ -0.5
TRAPPC4-211ENST00000533012 SMG7Q92540 1137 aaKnown RBP11.92□□□□□ -0.5
TRAPPC4-211ENST00000533012 C8orf48Q96LL4 319 aa11.92□□□□□ -0.5
TRAPPC4-211ENST00000533012 CEP295NLQ96MC4 621 aa11.92□□□□□ -0.5
TRAPPC4-211ENST00000533012 RHOBTB2Q9BYZ6 727 aa11.92□□□□□ -0.5
TRAPPC4-211ENST00000533012 EDEM3Q9BZQ6 932 aa11.92□□□□□ -0.5
TRAPPC4-211ENST00000533012 S1PR5Q9H228 398 aa11.92□□□□□ -0.5
TRAPPC4-211ENST00000533012 HESX1Q9UBX0 185 aa11.92□□□□□ -0.5
TRAPPC4-211ENST00000533012 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.92□□□□□ -0.5
TRAPPC4-211ENST00000533012 PRRC2BQ5JSZ5 2229 aaKnown RBP11.92□□□□□ -0.5
TRAPPC4-211ENST00000533012 F8VZ95 297 aa11.91□□□□□ -0.5
TRAPPC4-211ENST00000533012 AP1G2O75843 785 aa11.91□□□□□ -0.5
TRAPPC4-211ENST00000533012 PAPLNO95428 1278 aa11.91□□□□□ -0.5
TRAPPC4-211ENST00000533012 CCDC172P0C7W6 258 aa11.91□□□□□ -0.5
TRAPPC4-211ENST00000533012 FAM200BP0CF97 657 aa11.91□□□□□ -0.5
TRAPPC4-211ENST00000533012 PTPN2P17706 415 aa11.91□□□□□ -0.5
TRAPPC4-211ENST00000533012 GNA15P30679 374 aa11.91□□□□□ -0.5
TRAPPC4-211ENST00000533012 SOX5P35711 763 aa11.91□□□□□ -0.5
TRAPPC4-211ENST00000533012 PBX1P40424 430 aa11.91□□□□□ -0.5
TRAPPC4-211ENST00000533012 AAK1Q2M2I8 961 aa11.91□□□□□ -0.5
TRAPPC4-211ENST00000533012 PUS10Q3MIT2 529 aaKnown RBP11.91□□□□□ -0.5
TRAPPC4-211ENST00000533012 LEXMQ3ZCV2 418 aa11.91□□□□□ -0.5
TRAPPC4-211ENST00000533012 FIGNQ5HY92 759 aa11.91□□□□□ -0.5
TRAPPC4-211ENST00000533012 DNAJB7Q7Z6W7 309 aaPredicted RBP11.91□□□□□ -0.5
TRAPPC4-211ENST00000533012 FAM35AQ86V20 835 aa11.91□□□□□ -0.5
TRAPPC4-211ENST00000533012 FMNL3Q8IVF7 1028 aa11.91□□□□□ -0.5
TRAPPC4-211ENST00000533012 ANKRD52Q8NB46 1076 aa11.91□□□□□ -0.5
TRAPPC4-211ENST00000533012 SMRP1Q8NCR6 262 aa11.91□□□□□ -0.5
TRAPPC4-211ENST00000533012 ZNF397Q8NF99 534 aaPredicted RBP11.91□□□□□ -0.5
TRAPPC4-211ENST00000533012 GIPC2Q8TF65 315 aa11.91□□□□□ -0.5
TRAPPC4-211ENST00000533012 ZNF606Q8WXB4 792 aa11.91□□□□□ -0.5
TRAPPC4-211ENST00000533012 TFAP2BQ92481 460 aa11.91□□□□□ -0.5
TRAPPC4-211ENST00000533012 ZNF707Q96C28 371 aaPredicted RBP11.91□□□□□ -0.5
TRAPPC4-211ENST00000533012 IQCDQ96DY2 449 aa11.91□□□□□ -0.5
TRAPPC4-211ENST00000533012 SPATA17Q96L03 361 aa11.91□□□□□ -0.5
TRAPPC4-211ENST00000533012 RIPOR3Q96MK2 946 aa11.91□□□□□ -0.5
TRAPPC4-211ENST00000533012 DUSP16Q9BY84 665 aa11.91□□□□□ -0.5
TRAPPC4-211ENST00000533012 GPR88Q9GZN0 384 aa11.91□□□□□ -0.5
TRAPPC4-211ENST00000533012 KRT82Q9NSB4 513 aa11.91□□□□□ -0.5
TRAPPC4-211ENST00000533012 TSPAN16Q9UKR8 245 aa11.91□□□□□ -0.5
TRAPPC4-211ENST00000533012 F8VP50 259 aa11.9□□□□□ -0.5
TRAPPC4-211ENST00000533012 O00370 1275 aa11.9□□□□□ -0.5
TRAPPC4-211ENST00000533012 THAP12O43422 761 aa11.9□□□□□ -0.5
TRAPPC4-211ENST00000533012 GFPT2O94808 682 aa11.9□□□□□ -0.5
TRAPPC4-211ENST00000533012 PNMA6AP0CW24 399 aaPredicted RBP11.9□□□□□ -0.5
TRAPPC4-211ENST00000533012 CSH1P0DML2 217 aa11.9□□□□□ -0.5
TRAPPC4-211ENST00000533012 CSH2P0DML3 217 aa11.9□□□□□ -0.5
TRAPPC4-211ENST00000533012 ATF6P18850 670 aa11.9□□□□□ -0.5
TRAPPC4-211ENST00000533012 BRD2P25440 801 aaKnown RBP11.9□□□□□ -0.5
TRAPPC4-211ENST00000533012 CLCN1P35523 988 aa11.9□□□□□ -0.5
TRAPPC4-211ENST00000533012 KRT9P35527 623 aa11.9□□□□□ -0.5
TRAPPC4-211ENST00000533012 MTHFRP42898 656 aa11.9□□□□□ -0.5
TRAPPC4-211ENST00000533012 GPR15P49685 360 aa11.9□□□□□ -0.5
TRAPPC4-211ENST00000533012 MAP3K7CLP57077 242 aa11.9□□□□□ -0.5
TRAPPC4-211ENST00000533012 JAM2P57087 298 aa11.9□□□□□ -0.5
TRAPPC4-211ENST00000533012 SMAD4Q13485 552 aaKnown RBP11.9□□□□□ -0.5
TRAPPC4-211ENST00000533012 GOLGA7BQ2TAP0 167 aa11.9□□□□□ -0.5
TRAPPC4-211ENST00000533012 CYP4A22Q5TCH4 519 aa11.9□□□□□ -0.5
TRAPPC4-211ENST00000533012 SDHAF4Q5VUM1 108 aa11.9□□□□□ -0.5
TRAPPC4-211ENST00000533012 LCLAT1Q6UWP7 414 aa11.9□□□□□ -0.5
TRAPPC4-211ENST00000533012 GRASPQ7Z6J2 395 aaPredicted RBP11.9□□□□□ -0.5
TRAPPC4-211ENST00000533012 GPR152Q8TDT2 470 aa11.9□□□□□ -0.5
TRAPPC4-211ENST00000533012 CPLX3Q8WVH0 158 aa11.9□□□□□ -0.5
TRAPPC4-211ENST00000533012 PSMG2Q969U7 264 aa11.9□□□□□ -0.5
TRAPPC4-211ENST00000533012 NECTIN4Q96NY8 510 aa11.9□□□□□ -0.5
TRAPPC4-211ENST00000533012 KCNK16Q96T55 309 aa11.9□□□□□ -0.5
TRAPPC4-211ENST00000533012 CORO1BQ9BR76 489 aa11.9□□□□□ -0.5
TRAPPC4-211ENST00000533012 UBXN6Q9BZV1 441 aa11.9□□□□□ -0.5
TRAPPC4-211ENST00000533012 CSNK1G1Q9HCP0 422 aa11.9□□□□□ -0.5
TRAPPC4-211ENST00000533012 DMAP1Q9NPF5 467 aaPredicted RBP11.9□□□□□ -0.5
TRAPPC4-211ENST00000533012 PRDM6Q9NQX0 595 aa11.9□□□□□ -0.5
TRAPPC4-211ENST00000533012 EHD2Q9NZN4 543 aa11.9□□□□□ -0.5
TRAPPC4-211ENST00000533012 THEGQ9P2T0 379 aa11.9□□□□□ -0.5
TRAPPC4-211ENST00000533012 DNMT3BQ9UBC3 853 aaKnown RBP11.9□□□□□ -0.5
TRAPPC4-211ENST00000533012 MYO6Q9UM54 1294 aa11.9□□□□□ -0.5
TRAPPC4-211ENST00000533012 FAM50BQ9Y247 325 aa11.9□□□□□ -0.5
TRAPPC4-211ENST00000533012 MYO7AQ13402 2215 aa11.9□□□□□ -0.51
TRAPPC4-211ENST00000533012 ITIH6Q6UXX5 1313 aa11.89□□□□□ -0.51
TRAPPC4-211ENST00000533012 A0A1W2PQJ5 194 aa11.89□□□□□ -0.51
TRAPPC4-211ENST00000533012 SLC38A8A6NNN8 435 aa11.89□□□□□ -0.51
TRAPPC4-211ENST00000533012 AP5Z1O43299 807 aa11.89□□□□□ -0.51
TRAPPC4-211ENST00000533012 MBTPS2O43462 519 aa11.89□□□□□ -0.51
TRAPPC4-211ENST00000533012 BEST1O76090 585 aa11.89□□□□□ -0.51
TRAPPC4-211ENST00000533012 MICAL2O94851 1124 aa11.89□□□□□ -0.51
TRAPPC4-211ENST00000533012 CALCAP01258 141 aa11.89□□□□□ -0.51
TRAPPC4-211ENST00000533012 CYP11B1P15538 503 aa11.89□□□□□ -0.51
TRAPPC4-211ENST00000533012 NPR3P17342 541 aa11.89□□□□□ -0.51
TRAPPC4-211ENST00000533012 CACNA2D1P54289 1103 aa11.89□□□□□ -0.51
TRAPPC4-211ENST00000533012 BCAT1P54687 386 aa11.89□□□□□ -0.51
TRAPPC4-211ENST00000533012 TFF2Q03403 129 aa11.89□□□□□ -0.51
TRAPPC4-211ENST00000533012 SPECC1LQ69YQ0 1117 aa11.89□□□□□ -0.51
TRAPPC4-211ENST00000533012 CLEC20AQ6ZU45 233 aa11.89□□□□□ -0.51
TRAPPC4-211ENST00000533012 DENND5BQ6ZUT9 1274 aa11.89□□□□□ -0.51
TRAPPC4-211ENST00000533012 SLC47A2Q86VL8 602 aa11.89□□□□□ -0.51
TRAPPC4-211ENST00000533012 VSTM4Q8IW00 320 aa11.89□□□□□ -0.51
TRAPPC4-211ENST00000533012 NUP93Q8N1F7 819 aa11.89□□□□□ -0.51
TRAPPC4-211ENST00000533012 LEMD2Q8NC56 503 aa11.89□□□□□ -0.51
TRAPPC4-211ENST00000533012 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms