RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 PCED1BQ96HM7 432 aa20.25■□□□□ 0.83
SSH3-209ENST00000532600 SLC22A12Q96S37 553 aa20.25■□□□□ 0.83
SSH3-209ENST00000532600 DPEP3Q9H4B8 488 aa20.25■□□□□ 0.83
SSH3-209ENST00000532600 LMAN1LQ9HAT1 526 aa20.25■□□□□ 0.83
SSH3-209ENST00000532600 LMBRD1Q9NUN5 540 aa20.25■□□□□ 0.83
SSH3-209ENST00000532600 EP300Q09472 2414 aaPredicted RBP20.25■□□□□ 0.83
SSH3-209ENST00000532600 FRYLO94915 3013 aa20.24■□□□□ 0.83
SSH3-209ENST00000532600 SPTBN4Q9H254 2564 aa20.24■□□□□ 0.83
SSH3-209ENST00000532600 OTOGLQ3ZCN5 2332 aa20.24■□□□□ 0.83
SSH3-209ENST00000532600 OTOL1A6NHN0 477 aaPredicted RBP20.24■□□□□ 0.83
SSH3-209ENST00000532600 SPECC1L-ADORA2AF8WAN1 911 aa20.24■□□□□ 0.83
SSH3-209ENST00000532600 VNN1O95497 513 aa20.24■□□□□ 0.83
SSH3-209ENST00000532600 BDNFP23560 247 aa20.24■□□□□ 0.83
SSH3-209ENST00000532600 CTHP32929 405 aa20.24■□□□□ 0.83
SSH3-209ENST00000532600 CACNA2D1P54289 1103 aa20.24■□□□□ 0.83
SSH3-209ENST00000532600 USP46P62068 366 aa20.24■□□□□ 0.83
SSH3-209ENST00000532600 UBE2HP62256 183 aa20.24■□□□□ 0.83
SSH3-209ENST00000532600 C1orf220Q5T0J3 134 aa20.24■□□□□ 0.83
SSH3-209ENST00000532600 MYCBPAPQ8TBZ2 947 aa20.24■□□□□ 0.83
SSH3-209ENST00000532600 FAM83CQ9BQN1 747 aa20.24■□□□□ 0.83
SSH3-209ENST00000532600 HPS4Q9NQG7 708 aa20.24■□□□□ 0.83
SSH3-209ENST00000532600 RBM12Q9NTZ6 932 aaKnown RBP20.24■□□□□ 0.83
SSH3-209ENST00000532600 MAGEC2Q9UBF1 373 aaPredicted RBP20.24■□□□□ 0.83
SSH3-209ENST00000532600 R3HCC1Q9Y3T6 440 aaKnown RBP20.24■□□□□ 0.83
SSH3-209ENST00000532600 GPR179Q6PRD1 2367 aa20.24■□□□□ 0.83
SSH3-209ENST00000532600 ZNF638Q14966 1978 aaKnown RBP20.23■□□□□ 0.83
SSH3-209ENST00000532600 LMNAP02545 664 aaKnown RBP20.23■□□□□ 0.83
SSH3-209ENST00000532600 C4BPAP04003 597 aaKnown RBP20.23■□□□□ 0.83
SSH3-209ENST00000532600 RPN1P04843 607 aaKnown RBP20.23■□□□□ 0.83
SSH3-209ENST00000532600 DDX6P26196 483 aaKnown RBP eCLIP20.23■□□□□ 0.83
SSH3-209ENST00000532600 GNL1P36915 607 aaPredicted RBP20.23■□□□□ 0.83
SSH3-209ENST00000532600 KPNA1P52294 538 aaPredicted RBP20.23■□□□□ 0.83
SSH3-209ENST00000532600 DPYDQ12882 1025 aa20.23■□□□□ 0.83
SSH3-209ENST00000532600 MDH1BQ5I0G3 518 aa20.23■□□□□ 0.83
SSH3-209ENST00000532600 MAMSTRQ6ZN01 415 aa20.23■□□□□ 0.83
SSH3-209ENST00000532600 SUMF1Q8NBK3 374 aa20.23■□□□□ 0.83
SSH3-209ENST00000532600 ZBTB44Q8NCP5 570 aa20.23■□□□□ 0.83
SSH3-209ENST00000532600 GOLGA5Q8TBA6 731 aa20.23■□□□□ 0.83
SSH3-209ENST00000532600 CYP2S1Q96SQ9 504 aa20.23■□□□□ 0.83
SSH3-209ENST00000532600 SEMA4AQ9H3S1 761 aa20.23■□□□□ 0.83
SSH3-209ENST00000532600 SMYD3Q9H7B4 428 aa20.23■□□□□ 0.83
SSH3-209ENST00000532600 C8orf33Q9H7E9 229 aaPredicted RBP20.23■□□□□ 0.83
SSH3-209ENST00000532600 C2orf78A6NCI8 922 aa20.22■□□□□ 0.83
SSH3-209ENST00000532600 SOBPA7XYQ1 873 aa20.22■□□□□ 0.83
SSH3-209ENST00000532600 PDXKO00764 312 aa20.22■□□□□ 0.83
SSH3-209ENST00000532600 NR3C1P04150 777 aa20.22■□□□□ 0.83
SSH3-209ENST00000532600 MYL1P05976 194 aa20.22■□□□□ 0.83
SSH3-209ENST00000532600 FAM163BP0C2L3 166 aa20.22■□□□□ 0.83
SSH3-209ENST00000532600 AVPR1AP37288 418 aa20.22■□□□□ 0.83
SSH3-209ENST00000532600 CYP27A1Q02318 531 aa20.22■□□□□ 0.83
SSH3-209ENST00000532600 TRIM68Q6AZZ1 485 aa20.22■□□□□ 0.83
SSH3-209ENST00000532600 C4orf50Q6ZRC1 276 aa20.22■□□□□ 0.83
SSH3-209ENST00000532600 OR6B3Q8NGW1 331 aa20.22■□□□□ 0.83
SSH3-209ENST00000532600 MRPS31Q92665 395 aaKnown RBP20.22■□□□□ 0.83
SSH3-209ENST00000532600 MSANTD3Q96H12 275 aa20.22■□□□□ 0.83
SSH3-209ENST00000532600 SPATA17Q96L03 361 aa20.22■□□□□ 0.83
SSH3-209ENST00000532600 GBP4Q96PP9 640 aa20.22■□□□□ 0.83
SSH3-209ENST00000532600 SDCBP2Q9H190 292 aa20.22■□□□□ 0.83
SSH3-209ENST00000532600 VRTNQ9H8Y1 702 aa20.22■□□□□ 0.83
SSH3-209ENST00000532600 GKN1Q9NS71 199 aa20.22■□□□□ 0.83
SSH3-209ENST00000532600 TDP1Q9NUW8 608 aa20.22■□□□□ 0.83
SSH3-209ENST00000532600 C2orf42Q9NWW7 574 aa20.22■□□□□ 0.83
SSH3-209ENST00000532600 GCNT4Q9P109 453 aa20.22■□□□□ 0.83
SSH3-209ENST00000532600 UXTQ9UBK9 157 aaPredicted RBP20.22■□□□□ 0.83
SSH3-209ENST00000532600 NXF1Q9UBU9 619 aaKnown RBP20.22■□□□□ 0.83
SSH3-209ENST00000532600 ZMYM5Q9UJ78 669 aa20.22■□□□□ 0.83
SSH3-209ENST00000532600 LILRB5O75023 590 aa20.21■□□□□ 0.83
SSH3-209ENST00000532600 RHOBTB3O94955 611 aa20.21■□□□□ 0.83
SSH3-209ENST00000532600 PTPN1P18031 435 aaKnown RBP20.21■□□□□ 0.83
SSH3-209ENST00000532600 HOXC13P31276 330 aa20.21■□□□□ 0.83
SSH3-209ENST00000532600 ATICP31939 592 aa20.21■□□□□ 0.83
SSH3-209ENST00000532600 RAP1GAPP47736 663 aa20.21■□□□□ 0.83
SSH3-209ENST00000532600 CDH8P55286 799 aa20.21■□□□□ 0.83
SSH3-209ENST00000532600 TNNC1P63316 161 aa20.21■□□□□ 0.83
SSH3-209ENST00000532600 PLCB2Q00722 1185 aa20.21■□□□□ 0.83
SSH3-209ENST00000532600 TRPC3Q13507 836 aa20.21■□□□□ 0.83
SSH3-209ENST00000532600 ZNF268Q14587 947 aaPredicted RBP20.21■□□□□ 0.83
SSH3-209ENST00000532600 ZC3H14Q6PJT7 736 aaKnown RBP20.21■□□□□ 0.83
SSH3-209ENST00000532600 VSTM1Q6UX27 236 aa20.21■□□□□ 0.83
SSH3-209ENST00000532600 Q6ZS52 159 aa20.21■□□□□ 0.83
SSH3-209ENST00000532600 RALGPS2Q86X27 583 aaPredicted RBP20.21■□□□□ 0.83
SSH3-209ENST00000532600 B3GNT5Q9BYG0 378 aa20.21■□□□□ 0.83
SSH3-209ENST00000532600 SNX25Q9H3E2 840 aa20.21■□□□□ 0.83
SSH3-209ENST00000532600 CLDN5O00501 218 aa20.2■□□□□ 0.82
SSH3-209ENST00000532600 ARSAP15289 507 aa20.2■□□□□ 0.82
SSH3-209ENST00000532600 GRIK1P39086 918 aa20.2■□□□□ 0.82
SSH3-209ENST00000532600 ZXDBP98169 803 aa20.2■□□□□ 0.82
SSH3-209ENST00000532600 SATB1Q01826 763 aa20.2■□□□□ 0.82
SSH3-209ENST00000532600 PON2Q15165 354 aa20.2■□□□□ 0.82
SSH3-209ENST00000532600 MAPRE1Q15691 268 aaKnown RBP20.2■□□□□ 0.82
SSH3-209ENST00000532600 SYAP1Q96A49 352 aaPredicted RBP20.2■□□□□ 0.82
SSH3-209ENST00000532600 ZNF518BQ9C0D4 1074 aa20.2■□□□□ 0.82
SSH3-209ENST00000532600 EBF3Q9H4W6 596 aa20.2■□□□□ 0.82
SSH3-209ENST00000532600 ZSCAN32Q9NX65 697 aa20.2■□□□□ 0.82
SSH3-209ENST00000532600 TRAF3IP3Q9Y228 551 aa20.2■□□□□ 0.82
SSH3-209ENST00000532600 PCDHGA2Q9Y5H1 932 aa20.2■□□□□ 0.82
SSH3-209ENST00000532600 HELZP42694 1942 aaKnown RBP20.19■□□□□ 0.82
SSH3-209ENST00000532600 F8VP50 259 aa20.19■□□□□ 0.82
SSH3-209ENST00000532600 PHACTR2O75167 634 aa20.19■□□□□ 0.82
SSH3-209ENST00000532600 BIRC3Q13489 604 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms