RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 C12orf56Q8IXR9 622 aa23.81■■□□□ 1.4
TRAPPC4-210ENST00000531290 TTC16Q8NEE8 873 aa23.81■■□□□ 1.4
TRAPPC4-210ENST00000531290 OR6B3Q8NGW1 331 aa23.81■■□□□ 1.4
TRAPPC4-210ENST00000531290 CRTAC1Q9NQ79 661 aa23.81■■□□□ 1.4
TRAPPC4-210ENST00000531290 SERTAD1Q9UHV2 236 aa23.81■■□□□ 1.4
TRAPPC4-210ENST00000531290 TSC2P49815 1807 aa23.8■■□□□ 1.4
TRAPPC4-210ENST00000531290 PHACTR2O75167 634 aa23.8■■□□□ 1.4
TRAPPC4-210ENST00000531290 TACC1O75410 805 aa23.8■■□□□ 1.4
TRAPPC4-210ENST00000531290 TADA3O75528 432 aa23.8■■□□□ 1.4
TRAPPC4-210ENST00000531290 ANXA13P27216 316 aa23.8■■□□□ 1.4
TRAPPC4-210ENST00000531290 FAM160A1Q05DH4 1040 aa23.8■■□□□ 1.4
TRAPPC4-210ENST00000531290 GRSF1Q12849 480 aaKnown RBP eCLIP23.8■■□□□ 1.4
TRAPPC4-210ENST00000531290 WDR44Q5JSH3 913 aa23.8■■□□□ 1.4
TRAPPC4-210ENST00000531290 GRAMD1CQ8IYS0 662 aa23.8■■□□□ 1.4
TRAPPC4-210ENST00000531290 MYCBPAPQ8TBZ2 947 aa23.8■■□□□ 1.4
TRAPPC4-210ENST00000531290 RMDN1Q96DB5 314 aa23.8■■□□□ 1.4
TRAPPC4-210ENST00000531290 SPATA17Q96L03 361 aa23.8■■□□□ 1.4
TRAPPC4-210ENST00000531290 CEP295NLQ96MC4 621 aa23.8■■□□□ 1.4
TRAPPC4-210ENST00000531290 CYP2S1Q96SQ9 504 aa23.8■■□□□ 1.4
TRAPPC4-210ENST00000531290 MRPL45Q9BRJ2 306 aaKnown RBP23.8■■□□□ 1.4
TRAPPC4-210ENST00000531290 HPS4Q9NQG7 708 aa23.8■■□□□ 1.4
TRAPPC4-210ENST00000531290 EHD2Q9NZN4 543 aa23.8■■□□□ 1.4
TRAPPC4-210ENST00000531290 GMEB2Q9UKD1 530 aa23.8■■□□□ 1.4
TRAPPC4-210ENST00000531290 ANK1P16157 1881 aa23.79■■□□□ 1.4
TRAPPC4-210ENST00000531290 PAPSS2O95340 614 aaPredicted RBP23.79■■□□□ 1.4
TRAPPC4-210ENST00000531290 MTF1Q14872 753 aa23.79■■□□□ 1.4
TRAPPC4-210ENST00000531290 EXOC4Q96A65 974 aa23.79■■□□□ 1.4
TRAPPC4-210ENST00000531290 PAGE5Q96GU1 130 aa23.79■■□□□ 1.4
TRAPPC4-210ENST00000531290 PCED1BQ96HM7 432 aa23.79■■□□□ 1.4
TRAPPC4-210ENST00000531290 EXOC1Q9NV70 894 aa23.79■■□□□ 1.4
TRAPPC4-210ENST00000531290 NXF1Q9UBU9 619 aaKnown RBP23.79■■□□□ 1.4
TRAPPC4-210ENST00000531290 CHURC1-FNTBB4DL54 471 aa23.78■■□□□ 1.4
TRAPPC4-210ENST00000531290 ARSAP15289 507 aa23.78■■□□□ 1.4
TRAPPC4-210ENST00000531290 HDCP19113 662 aa23.78■■□□□ 1.4
TRAPPC4-210ENST00000531290 ATICP31939 592 aa23.78■■□□□ 1.4
TRAPPC4-210ENST00000531290 FNTBP49356 437 aa23.78■■□□□ 1.4
TRAPPC4-210ENST00000531290 PDE6CP51160 858 aa23.78■■□□□ 1.4
TRAPPC4-210ENST00000531290 KCNB1Q14721 858 aa23.78■■□□□ 1.4
TRAPPC4-210ENST00000531290 MDH1BQ5I0G3 518 aa23.78■■□□□ 1.4
TRAPPC4-210ENST00000531290 PRR23BQ6ZRT6 265 aa23.78■■□□□ 1.4
TRAPPC4-210ENST00000531290 DENND5BQ6ZUT9 1274 aa23.78■■□□□ 1.4
TRAPPC4-210ENST00000531290 LONP2Q86WA8 852 aa23.78■■□□□ 1.4
TRAPPC4-210ENST00000531290 ARL14EPQ8N8R7 260 aaPredicted RBP23.78■■□□□ 1.4
TRAPPC4-210ENST00000531290 ZNF516Q92618 1163 aa23.78■■□□□ 1.4
TRAPPC4-210ENST00000531290 SYAP1Q96A49 352 aaPredicted RBP23.78■■□□□ 1.4
TRAPPC4-210ENST00000531290 DUS2Q9NX74 493 aaKnown RBP23.78■■□□□ 1.4
TRAPPC4-210ENST00000531290 TRPM5Q9NZQ8 1165 aa23.78■■□□□ 1.4
TRAPPC4-210ENST00000531290 OTOL1A6NHN0 477 aaPredicted RBP23.77■■□□□ 1.4
TRAPPC4-210ENST00000531290 TRDMT1O14717 391 aaKnown RBP23.77■■□□□ 1.4
TRAPPC4-210ENST00000531290 TRIM66O15016 1216 aa23.77■■□□□ 1.4
TRAPPC4-210ENST00000531290 CLSTN1O94985 981 aa23.77■■□□□ 1.4
TRAPPC4-210ENST00000531290 STAU1O95793 577 aaKnown RBP23.77■■□□□ 1.4
TRAPPC4-210ENST00000531290 PTPN1P18031 435 aaKnown RBP23.77■■□□□ 1.4
TRAPPC4-210ENST00000531290 CNR2P34972 360 aa23.77■■□□□ 1.4
TRAPPC4-210ENST00000531290 AP3M2P53677 418 aa23.77■■□□□ 1.4
TRAPPC4-210ENST00000531290 MYL6P60660 151 aa23.77■■□□□ 1.4
TRAPPC4-210ENST00000531290 PSMD2Q13200 908 aa23.77■■□□□ 1.4
TRAPPC4-210ENST00000531290 BIRC3Q13489 604 aa23.77■■□□□ 1.4
TRAPPC4-210ENST00000531290 BECN1Q14457 450 aa23.77■■□□□ 1.4
TRAPPC4-210ENST00000531290 PUM1Q14671 1186 aaKnown RBP eCLIP23.77■■□□□ 1.4
TRAPPC4-210ENST00000531290 LPAL2Q16609 132 aa23.77■■□□□ 1.4
TRAPPC4-210ENST00000531290 TMEM196Q5HYL7 178 aa23.77■■□□□ 1.4
TRAPPC4-210ENST00000531290 HEATR6Q6AI08 1181 aaKnown RBP23.77■■□□□ 1.4
TRAPPC4-210ENST00000531290 CPA6Q8N4T0 437 aa23.77■■□□□ 1.4
TRAPPC4-210ENST00000531290 RIN3Q8TB24 985 aa23.77■■□□□ 1.4
TRAPPC4-210ENST00000531290 OSCP1Q8WVF1 389 aa23.77■■□□□ 1.4
TRAPPC4-210ENST00000531290 SLC22A12Q96S37 553 aa23.77■■□□□ 1.4
TRAPPC4-210ENST00000531290 ZNF292O60281 2723 aa23.77■■□□□ 1.4
TRAPPC4-210ENST00000531290 GPR179Q6PRD1 2367 aa23.76■■□□□ 1.39
TRAPPC4-210ENST00000531290 A8MXQ7 604 aa23.76■■□□□ 1.39
TRAPPC4-210ENST00000531290 K7ESF4 209 aa23.76■■□□□ 1.39
TRAPPC4-210ENST00000531290 ACTN4O43707 911 aaKnown RBP23.76■■□□□ 1.39
TRAPPC4-210ENST00000531290 ATG13O75143 517 aa23.76■■□□□ 1.39
TRAPPC4-210ENST00000531290 CMA1P23946 247 aa23.76■■□□□ 1.39
TRAPPC4-210ENST00000531290 IFNAR2P48551 515 aa23.76■■□□□ 1.39
TRAPPC4-210ENST00000531290 DMWDQ09019 674 aa23.76■■□□□ 1.39
TRAPPC4-210ENST00000531290 STK4Q13043 487 aa23.76■■□□□ 1.39
TRAPPC4-210ENST00000531290 SIM2Q14190 667 aaPredicted RBP23.76■■□□□ 1.39
TRAPPC4-210ENST00000531290 SH3RF2Q8TEC5 729 aa23.76■■□□□ 1.39
TRAPPC4-210ENST00000531290 GCNT4Q9P109 453 aa23.76■■□□□ 1.39
TRAPPC4-210ENST00000531290 USP25Q9UHP3 1055 aa23.76■■□□□ 1.39
TRAPPC4-210ENST00000531290 COL4A2P08572 1712 aa23.76■■□□□ 1.39
TRAPPC4-210ENST00000531290 FRYLO94915 3013 aa23.76■■□□□ 1.39
TRAPPC4-210ENST00000531290 SPTBN4Q9H254 2564 aa23.75■■□□□ 1.39
TRAPPC4-210ENST00000531290 TICRRQ7Z2Z1 1910 aa23.75■■□□□ 1.39
TRAPPC4-210ENST00000531290 A0A1B0GVL5 298 aa23.75■■□□□ 1.39
TRAPPC4-210ENST00000531290 C2orf78A6NCI8 922 aa23.75■■□□□ 1.39
TRAPPC4-210ENST00000531290 KLRC4O43908 158 aa23.75■■□□□ 1.39
TRAPPC4-210ENST00000531290 CASP4P49662 377 aa23.75■■□□□ 1.39
TRAPPC4-210ENST00000531290 ZNF77Q15935 545 aa23.75■■□□□ 1.39
TRAPPC4-210ENST00000531290 KMT5BQ4FZB7 885 aa23.75■■□□□ 1.39
TRAPPC4-210ENST00000531290 LAIR1Q6GTX8 287 aa23.75■■□□□ 1.39
TRAPPC4-210ENST00000531290 FSTL4Q6MZW2 842 aa23.75■■□□□ 1.39
TRAPPC4-210ENST00000531290 DGLUCYQ7Z3D6 616 aa23.75■■□□□ 1.39
TRAPPC4-210ENST00000531290 ATP2A3Q93084 1043 aa23.75■■□□□ 1.39
TRAPPC4-210ENST00000531290 C8orf48Q96LL4 319 aa23.75■■□□□ 1.39
TRAPPC4-210ENST00000531290 ELOVL4Q9GZR5 314 aa23.75■■□□□ 1.39
TRAPPC4-210ENST00000531290 GZF1Q9H116 711 aaPredicted RBP23.75■■□□□ 1.39
TRAPPC4-210ENST00000531290 XYLT2Q9H1B5 865 aa23.75■■□□□ 1.39
TRAPPC4-210ENST00000531290 ECT2Q9H8V3 914 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms