RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 MAPRE1Q15691 268 aaKnown RBP16.88■□□□□ 0.29
CPSF1-205ENST00000531042 BMT2Q1RMZ1 405 aa16.88■□□□□ 0.29
CPSF1-205ENST00000531042 ATL3Q6DD88 541 aa16.88■□□□□ 0.29
CPSF1-205ENST00000531042 CC2D1AQ6P1N0 951 aaPredicted RBP16.88■□□□□ 0.29
CPSF1-205ENST00000531042 VSTM1Q6UX27 236 aa16.88■□□□□ 0.29
CPSF1-205ENST00000531042 HS2ST1Q7LGA3 356 aa16.88■□□□□ 0.29
CPSF1-205ENST00000531042 CCDC127Q96BQ5 260 aa16.88■□□□□ 0.29
CPSF1-205ENST00000531042 SPATA17Q96L03 361 aa16.88■□□□□ 0.29
CPSF1-205ENST00000531042 SLC22A12Q96S37 553 aa16.88■□□□□ 0.29
CPSF1-205ENST00000531042 CYP2S1Q96SQ9 504 aa16.88■□□□□ 0.29
CPSF1-205ENST00000531042 TRPC7Q9HCX4 862 aa16.88■□□□□ 0.29
CPSF1-205ENST00000531042 SLC39A2Q9NP94 309 aa16.88■□□□□ 0.29
CPSF1-205ENST00000531042 DLL3Q9NYJ7 618 aa16.88■□□□□ 0.29
CPSF1-205ENST00000531042 GMEB2Q9UKD1 530 aa16.88■□□□□ 0.29
CPSF1-205ENST00000531042 RAB23Q9ULC3 237 aa16.88■□□□□ 0.29
CPSF1-205ENST00000531042 CEP250Q9BV73 2442 aa16.87■□□□□ 0.29
CPSF1-205ENST00000531042 TRAV19A0A0A6YYK7 116 aa16.87■□□□□ 0.29
CPSF1-205ENST00000531042 TRDMT1O14717 391 aaKnown RBP16.87■□□□□ 0.29
CPSF1-205ENST00000531042 HRO43593 1189 aa16.87■□□□□ 0.29
CPSF1-205ENST00000531042 TACC1O75410 805 aa16.87■□□□□ 0.29
CPSF1-205ENST00000531042 USP17L7P0C7H9 530 aa16.87■□□□□ 0.29
CPSF1-205ENST00000531042 ARSAP15289 507 aa16.87■□□□□ 0.29
CPSF1-205ENST00000531042 TGM1P22735 817 aa16.87■□□□□ 0.29
CPSF1-205ENST00000531042 BDNFP23560 247 aa16.87■□□□□ 0.29
CPSF1-205ENST00000531042 AFMP43652 599 aa16.87■□□□□ 0.29
CPSF1-205ENST00000531042 FAM160A1Q05DH4 1040 aa16.87■□□□□ 0.29
CPSF1-205ENST00000531042 PKP1Q13835 747 aa16.87■□□□□ 0.29
CPSF1-205ENST00000531042 MTF1Q14872 753 aa16.87■□□□□ 0.29
CPSF1-205ENST00000531042 PDGFRLQ15198 375 aa16.87■□□□□ 0.29
CPSF1-205ENST00000531042 LPAL2Q16609 132 aa16.87■□□□□ 0.29
CPSF1-205ENST00000531042 TMEM196Q5HYL7 178 aa16.87■□□□□ 0.29
CPSF1-205ENST00000531042 LAIR1Q6GTX8 287 aa16.87■□□□□ 0.29
CPSF1-205ENST00000531042 FSTL4Q6MZW2 842 aa16.87■□□□□ 0.29
CPSF1-205ENST00000531042 DGLUCYQ7Z3D6 616 aa16.87■□□□□ 0.29
CPSF1-205ENST00000531042 LONP2Q86WA8 852 aa16.87■□□□□ 0.29
CPSF1-205ENST00000531042 C12orf56Q8IXR9 622 aa16.87■□□□□ 0.29
CPSF1-205ENST00000531042 FSIP1Q8NA03 581 aa16.87■□□□□ 0.29
CPSF1-205ENST00000531042 MYCBPAPQ8TBZ2 947 aa16.87■□□□□ 0.29
CPSF1-205ENST00000531042 ZNF516Q92618 1163 aa16.87■□□□□ 0.29
CPSF1-205ENST00000531042 CEP295NLQ96MC4 621 aa16.87■□□□□ 0.29
CPSF1-205ENST00000531042 MRPL45Q9BRJ2 306 aaKnown RBP16.87■□□□□ 0.29
CPSF1-205ENST00000531042 GZF1Q9H116 711 aaPredicted RBP16.87■□□□□ 0.29
CPSF1-205ENST00000531042 CGNQ9P2M7 1197 aaKnown RBP16.87■□□□□ 0.29
CPSF1-205ENST00000531042 CFAP45Q9UL16 551 aa16.87■□□□□ 0.29
CPSF1-205ENST00000531042 NME7Q9Y5B8 376 aa16.87■□□□□ 0.29
CPSF1-205ENST00000531042 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.86■□□□□ 0.29
CPSF1-205ENST00000531042 C2orf78A6NCI8 922 aa16.86■□□□□ 0.29
CPSF1-205ENST00000531042 CKMP06732 381 aa16.86■□□□□ 0.29
CPSF1-205ENST00000531042 FAM163BP0C2L3 166 aa16.86■□□□□ 0.29
CPSF1-205ENST00000531042 HOXA6P31267 233 aa16.86■□□□□ 0.29
CPSF1-205ENST00000531042 CNR2P34972 360 aa16.86■□□□□ 0.29
CPSF1-205ENST00000531042 GNL1P36915 607 aaPredicted RBP16.86■□□□□ 0.29
CPSF1-205ENST00000531042 GRIK1P39086 918 aa16.86■□□□□ 0.29
CPSF1-205ENST00000531042 AMPD2Q01433 879 aa16.86■□□□□ 0.29
CPSF1-205ENST00000531042 CYP27A1Q02318 531 aa16.86■□□□□ 0.29
CPSF1-205ENST00000531042 DNM1Q05193 864 aaKnown RBP16.86■□□□□ 0.29
CPSF1-205ENST00000531042 GRSF1Q12849 480 aaKnown RBP eCLIP16.86■□□□□ 0.29
CPSF1-205ENST00000531042 ZNF77Q15935 545 aa16.86■□□□□ 0.29
CPSF1-205ENST00000531042 KNOP1Q1ED39 458 aaKnown RBP16.86■□□□□ 0.29
CPSF1-205ENST00000531042 RSPO4Q2I0M5 234 aaPredicted RBP16.86■□□□□ 0.29
CPSF1-205ENST00000531042 WDR72Q3MJ13 1102 aa16.86■□□□□ 0.29
CPSF1-205ENST00000531042 PRR23BQ6ZRT6 265 aa16.86■□□□□ 0.29
CPSF1-205ENST00000531042 ARL14EPQ8N8R7 260 aaPredicted RBP16.86■□□□□ 0.29
CPSF1-205ENST00000531042 PCED1BQ96HM7 432 aa16.86■□□□□ 0.29
CPSF1-205ENST00000531042 SNX25Q9H3E2 840 aa16.86■□□□□ 0.29
CPSF1-205ENST00000531042 GCNT4Q9P109 453 aa16.86■□□□□ 0.29
CPSF1-205ENST00000531042 RCOR1Q9UKL0 485 aa16.86■□□□□ 0.29
CPSF1-205ENST00000531042 GTF3C3Q9Y5Q9 886 aa16.86■□□□□ 0.29
CPSF1-205ENST00000531042 ANXA13P27216 316 aa16.85■□□□□ 0.29
CPSF1-205ENST00000531042 HOXC13P31276 330 aa16.85■□□□□ 0.29
CPSF1-205ENST00000531042 USP4Q13107 963 aa16.85■□□□□ 0.29
CPSF1-205ENST00000531042 SRSF5Q13243 272 aaKnown RBP16.85■□□□□ 0.29
CPSF1-205ENST00000531042 SIM2Q14190 667 aaPredicted RBP16.85■□□□□ 0.29
CPSF1-205ENST00000531042 MDH1BQ5I0G3 518 aa16.85■□□□□ 0.29
CPSF1-205ENST00000531042 HEATR6Q6AI08 1181 aaKnown RBP16.85■□□□□ 0.29
CPSF1-205ENST00000531042 PKN3Q6P5Z2 889 aa16.85■□□□□ 0.29
CPSF1-205ENST00000531042 DENND5BQ6ZUT9 1274 aa16.85■□□□□ 0.29
CPSF1-205ENST00000531042 GRAMD1CQ8IYS0 662 aa16.85■□□□□ 0.29
CPSF1-205ENST00000531042 CEP57L1Q8IYX8 460 aa16.85■□□□□ 0.29
CPSF1-205ENST00000531042 OR6B3Q8NGW1 331 aa16.85■□□□□ 0.29
CPSF1-205ENST00000531042 OSCP1Q8WVF1 389 aa16.85■□□□□ 0.29
CPSF1-205ENST00000531042 FBRSL1Q9HCM7 1045 aaKnown RBP16.85■□□□□ 0.29
CPSF1-205ENST00000531042 PARD6AQ9NPB6 346 aa16.85■□□□□ 0.29
CPSF1-205ENST00000531042 DUS2Q9NX74 493 aaKnown RBP16.85■□□□□ 0.29
CPSF1-205ENST00000531042 SERTAD1Q9UHV2 236 aa16.85■□□□□ 0.29
CPSF1-205ENST00000531042 HELZP42694 1942 aaKnown RBP16.85■□□□□ 0.29
CPSF1-205ENST00000531042 TRIM66O15016 1216 aa16.84■□□□□ 0.29
CPSF1-205ENST00000531042 KLRC4O43908 158 aa16.84■□□□□ 0.29
CPSF1-205ENST00000531042 EXOC3O60645 756 aa16.84■□□□□ 0.29
CPSF1-205ENST00000531042 STAU1O95793 577 aaKnown RBP16.84■□□□□ 0.29
CPSF1-205ENST00000531042 RETP07949 1114 aa16.84■□□□□ 0.29
CPSF1-205ENST00000531042 SLFN14P0C7P3 912 aa16.84■□□□□ 0.29
CPSF1-205ENST00000531042 TCF3P15923 654 aa16.84■□□□□ 0.29
CPSF1-205ENST00000531042 HDCP19113 662 aa16.84■□□□□ 0.29
CPSF1-205ENST00000531042 ATICP31939 592 aa16.84■□□□□ 0.29
CPSF1-205ENST00000531042 GJA4P35212 333 aa16.84■□□□□ 0.29
CPSF1-205ENST00000531042 GALK1P51570 392 aa16.84■□□□□ 0.29
CPSF1-205ENST00000531042 MYL6P60660 151 aa16.84■□□□□ 0.29
CPSF1-205ENST00000531042 USP46P62068 366 aa16.84■□□□□ 0.29
CPSF1-205ENST00000531042 TNNC1P63316 161 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms