RNA–Protein interactions for RNA: ENST00000526480.1

CSTF3-207, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 3

Gene CSTF3, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-207ENST00000526480 UAP1L1Q3KQV9 507 aa6.92□□□□□ -1.3
CSTF3-207ENST00000526480 USH1GQ495M9 461 aa6.92□□□□□ -1.3
CSTF3-207ENST00000526480 UTP14CQ5TAP6 766 aaKnown RBP6.92□□□□□ -1.3
CSTF3-207ENST00000526480 ZNF852Q6ZMS4 543 aa6.92□□□□□ -1.3
CSTF3-207ENST00000526480 UNC5AQ6ZN44 842 aa6.92□□□□□ -1.3
CSTF3-207ENST00000526480 Q6ZS52 159 aa6.92□□□□□ -1.3
CSTF3-207ENST00000526480 CATIPQ7Z7H3 387 aa6.92□□□□□ -1.3
CSTF3-207ENST00000526480 PHACTR4Q8IZ21 702 aa6.92□□□□□ -1.3
CSTF3-207ENST00000526480 LRRC43Q8N309 656 aa6.92□□□□□ -1.3
CSTF3-207ENST00000526480 SRBD1Q8N5C6 995 aaKnown RBP6.92□□□□□ -1.3
CSTF3-207ENST00000526480 AIFM3Q96NN9 605 aa6.92□□□□□ -1.3
CSTF3-207ENST00000526480 RMDN3Q96TC7 470 aa6.92□□□□□ -1.3
CSTF3-207ENST00000526480 NELL2Q99435 816 aa6.92□□□□□ -1.3
CSTF3-207ENST00000526480 RNF26Q9BY78 433 aaPredicted RBP6.92□□□□□ -1.3
CSTF3-207ENST00000526480 PLA2G2FQ9BZM2 168 aa6.92□□□□□ -1.3
CSTF3-207ENST00000526480 TMEM117Q9H0C3 514 aa6.92□□□□□ -1.3
CSTF3-207ENST00000526480 PIF1Q9H611 641 aa6.92□□□□□ -1.3
CSTF3-207ENST00000526480 KAT14Q9H8E8 782 aa6.92□□□□□ -1.3
CSTF3-207ENST00000526480 LMAN1LQ9HAT1 526 aa6.92□□□□□ -1.3
CSTF3-207ENST00000526480 TMEM9BQ9NQ34 198 aa6.92□□□□□ -1.3
CSTF3-207ENST00000526480 RBM28Q9NW13 759 aaKnown RBP6.92□□□□□ -1.3
CSTF3-207ENST00000526480 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.92□□□□□ -1.3
CSTF3-207ENST00000526480 TUBE1Q9UJT0 475 aa6.92□□□□□ -1.3
CSTF3-207ENST00000526480 TRPV2Q9Y5S1 764 aa6.92□□□□□ -1.3
CSTF3-207ENST00000526480 ADGRG4Q8IZF6 3080 aa6.91□□□□□ -1.3
CSTF3-207ENST00000526480 A0A087WV48 116 aa6.91□□□□□ -1.3
CSTF3-207ENST00000526480 MBLAC1A4D2B0 266 aaPredicted RBP6.91□□□□□ -1.3
CSTF3-207ENST00000526480 PATE3B3GLJ2 98 aa6.91□□□□□ -1.3
CSTF3-207ENST00000526480 RGS13O14921 159 aa6.91□□□□□ -1.3
CSTF3-207ENST00000526480 PRPF3O43395 683 aaKnown RBP6.91□□□□□ -1.3
CSTF3-207ENST00000526480 DHX16O60231 1041 aaKnown RBP6.91□□□□□ -1.3
CSTF3-207ENST00000526480 SPATA31D3P0C874 917 aa6.91□□□□□ -1.3
CSTF3-207ENST00000526480 KLRC2P26717 231 aa6.91□□□□□ -1.3
CSTF3-207ENST00000526480 ITPKBP27987 946 aa6.91□□□□□ -1.3
CSTF3-207ENST00000526480 SMARCA1P28370 1054 aa6.91□□□□□ -1.3
CSTF3-207ENST00000526480 CCNFP41002 786 aa6.91□□□□□ -1.3
CSTF3-207ENST00000526480 PXNP49023 591 aaPredicted RBP6.91□□□□□ -1.3
CSTF3-207ENST00000526480 NTHL1P78549 312 aa6.91□□□□□ -1.3
CSTF3-207ENST00000526480 RESTQ13127 1097 aa6.91□□□□□ -1.3
CSTF3-207ENST00000526480 PPFIA1Q13136 1202 aa6.91□□□□□ -1.3
CSTF3-207ENST00000526480 PPP2R5DQ14738 602 aa6.91□□□□□ -1.3
CSTF3-207ENST00000526480 NPY5RQ15761 445 aa6.91□□□□□ -1.3
CSTF3-207ENST00000526480 FXNQ16595 210 aa6.91□□□□□ -1.3
CSTF3-207ENST00000526480 CCDC96Q2M329 555 aa6.91□□□□□ -1.3
CSTF3-207ENST00000526480 BTNL9Q6UXG8 535 aa6.91□□□□□ -1.3
CSTF3-207ENST00000526480 SYNE3Q6ZMZ3 975 aa6.91□□□□□ -1.3
CSTF3-207ENST00000526480 SPATA31D4Q6ZUB0 917 aa6.91□□□□□ -1.3
CSTF3-207ENST00000526480 SLC24A5Q71RS6 500 aa6.91□□□□□ -1.3
CSTF3-207ENST00000526480 RSPH3Q86UC2 560 aa6.91□□□□□ -1.3
CSTF3-207ENST00000526480 WDR5BQ86VZ2 330 aa6.91□□□□□ -1.3
CSTF3-207ENST00000526480 PPFIBP1Q86W92 1011 aa6.91□□□□□ -1.3
CSTF3-207ENST00000526480 KRTAP19-1Q8IUB9 90 aa6.91□□□□□ -1.3
CSTF3-207ENST00000526480 MFSD2AQ8NA29 543 aa6.91□□□□□ -1.3
CSTF3-207ENST00000526480 FBXO18Q8NFZ0 1043 aa6.91□□□□□ -1.3
CSTF3-207ENST00000526480 NSUN6Q8TEA1 469 aaKnown RBP6.91□□□□□ -1.3
CSTF3-207ENST00000526480 GAB3Q8WWW8 586 aa6.91□□□□□ -1.3
CSTF3-207ENST00000526480 PHKBQ93100 1093 aa6.91□□□□□ -1.3
CSTF3-207ENST00000526480 CCDC74BQ96LY2 380 aa6.91□□□□□ -1.3
CSTF3-207ENST00000526480 IWS1Q96ST2 819 aa6.91□□□□□ -1.3
CSTF3-207ENST00000526480 SPZ1Q9BXG8 430 aa6.91□□□□□ -1.3
CSTF3-207ENST00000526480 RHOBTB2Q9BYZ6 727 aa6.91□□□□□ -1.3
CSTF3-207ENST00000526480 SEMA4CQ9C0C4 833 aa6.91□□□□□ -1.3
CSTF3-207ENST00000526480 PRORYQ9H606 182 aa6.91□□□□□ -1.3
CSTF3-207ENST00000526480 ATP6V0A4Q9HBG4 840 aa6.91□□□□□ -1.3
CSTF3-207ENST00000526480 PXMP2Q9NR77 195 aa6.91□□□□□ -1.3
CSTF3-207ENST00000526480 RBM12Q9NTZ6 932 aaKnown RBP6.91□□□□□ -1.3
CSTF3-207ENST00000526480 TMEM161AQ9NX61 479 aa6.91□□□□□ -1.3
CSTF3-207ENST00000526480 ORC3Q9UBD5 711 aaPredicted RBP6.91□□□□□ -1.3
CSTF3-207ENST00000526480 STX8Q9UNK0 236 aa6.91□□□□□ -1.3
CSTF3-207ENST00000526480 MAPK8IP1Q9UQF2 711 aa6.91□□□□□ -1.3
CSTF3-207ENST00000526480 NOC2LQ9Y3T9 749 aaKnown RBP6.91□□□□□ -1.3
CSTF3-207ENST00000526480 PCDHGA5Q9Y5G8 931 aa6.91□□□□□ -1.3
CSTF3-207ENST00000526480 SQORQ9Y6N5 450 aa6.91□□□□□ -1.3
CSTF3-207ENST00000526480 MYLKQ15746 1914 aa6.91□□□□□ -1.3
CSTF3-207ENST00000526480 CSMD1Q96PZ7 3565 aa6.91□□□□□ -1.3
CSTF3-207ENST00000526480 ICE1Q9Y2F5 2266 aa6.9□□□□□ -1.3
CSTF3-207ENST00000526480 MYH9P35579 1960 aaKnown RBP6.9□□□□□ -1.3
CSTF3-207ENST00000526480 CCDC196A0A1B0GTZ2 297 aa6.9□□□□□ -1.3
CSTF3-207ENST00000526480 DENND3A2RUS2 1198 aa6.9□□□□□ -1.3
CSTF3-207ENST00000526480 DHX15O43143 795 aaKnown RBP6.9□□□□□ -1.3
CSTF3-207ENST00000526480 B4GALT3O60512 393 aa6.9□□□□□ -1.3
CSTF3-207ENST00000526480 MAFO75444 373 aaPredicted RBP6.9□□□□□ -1.3
CSTF3-207ENST00000526480 CDKL5O76039 1030 aa6.9□□□□□ -1.3
CSTF3-207ENST00000526480 UBOX5O94941 541 aa6.9□□□□□ -1.3
CSTF3-207ENST00000526480 PAPSS2O95340 614 aaPredicted RBP6.9□□□□□ -1.3
CSTF3-207ENST00000526480 PAPLNO95428 1278 aa6.9□□□□□ -1.3
CSTF3-207ENST00000526480 BAG4O95429 457 aaKnown RBP6.9□□□□□ -1.3
CSTF3-207ENST00000526480 CHRNB1P11230 501 aa6.9□□□□□ -1.3
CSTF3-207ENST00000526480 PDCP20941 246 aa6.9□□□□□ -1.3
CSTF3-207ENST00000526480 RIPPLY3P57055 190 aa6.9□□□□□ -1.3
CSTF3-207ENST00000526480 IGBP1P78318 339 aa6.9□□□□□ -1.3
CSTF3-207ENST00000526480 FAM189BP81408 668 aa6.9□□□□□ -1.3
CSTF3-207ENST00000526480 PFKPQ01813 784 aa6.9□□□□□ -1.3
CSTF3-207ENST00000526480 ZNF543Q08ER8 600 aa6.9□□□□□ -1.3
CSTF3-207ENST00000526480 NFKBIBQ15653 356 aa6.9□□□□□ -1.3
CSTF3-207ENST00000526480 NKAPLQ5M9Q1 402 aa6.9□□□□□ -1.3
CSTF3-207ENST00000526480 SEZ6L2Q6UXD5 910 aa6.9□□□□□ -1.3
CSTF3-207ENST00000526480 CCNI2Q6ZMN8 369 aaPredicted RBP6.9□□□□□ -1.3
CSTF3-207ENST00000526480 CACNA2D4Q7Z3S7 1137 aa6.9□□□□□ -1.3
CSTF3-207ENST00000526480 PIP4P1Q86T03 277 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms