RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 PSMD14O00487 310 aa5.25□□□□□ -1.57
USP48-211ENST00000526044 RNF113AO15541 343 aaKnown RBP5.25□□□□□ -1.57
USP48-211ENST00000526044 ADCY6O43306 1168 aa5.25□□□□□ -1.57
USP48-211ENST00000526044 XPOTO43592 962 aaKnown RBP5.25□□□□□ -1.57
USP48-211ENST00000526044 PCDHGA12O60330 932 aa5.25□□□□□ -1.57
USP48-211ENST00000526044 NDUFS2O75306 463 aa5.25□□□□□ -1.57
USP48-211ENST00000526044 LDHCP07864 332 aa5.25□□□□□ -1.57
USP48-211ENST00000526044 ZFYP08048 801 aaPredicted RBP5.25□□□□□ -1.57
USP48-211ENST00000526044 HK1P19367 917 aa5.25□□□□□ -1.57
USP48-211ENST00000526044 CCND1P24385 295 aa5.25□□□□□ -1.57
USP48-211ENST00000526044 SREBF1P36956 1147 aa5.25□□□□□ -1.57
USP48-211ENST00000526044 WASP42768 502 aa5.25□□□□□ -1.57
USP48-211ENST00000526044 FLT3LGP49771 235 aa5.25□□□□□ -1.57
USP48-211ENST00000526044 PRELPP51888 382 aa5.25□□□□□ -1.57
USP48-211ENST00000526044 IGBP1P78318 339 aa5.25□□□□□ -1.57
USP48-211ENST00000526044 GSTO1P78417 241 aa5.25□□□□□ -1.57
USP48-211ENST00000526044 PTPN21Q16825 1174 aa5.25□□□□□ -1.57
USP48-211ENST00000526044 BRDTQ58F21 947 aaPredicted RBP5.25□□□□□ -1.57
USP48-211ENST00000526044 MFSD14BQ5SR56 506 aa5.25□□□□□ -1.57
USP48-211ENST00000526044 DACT2Q5SW24 774 aa5.25□□□□□ -1.57
USP48-211ENST00000526044 SLC9C2Q5TAH2 1124 aa5.25□□□□□ -1.57
USP48-211ENST00000526044 C1QL3Q5VWW1 255 aa5.25□□□□□ -1.57
USP48-211ENST00000526044 CRIP3Q6Q6R5 217 aa5.25□□□□□ -1.57
USP48-211ENST00000526044 CASC1Q6TDU7 716 aa5.25□□□□□ -1.57
USP48-211ENST00000526044 GPRIN1Q7Z2K8 1008 aa5.25□□□□□ -1.57
USP48-211ENST00000526044 ZNF572Q7Z3I7 529 aaPredicted RBP5.25□□□□□ -1.57
USP48-211ENST00000526044 PNMA8AQ86V59 439 aaPredicted RBP5.25□□□□□ -1.57
USP48-211ENST00000526044 XYLT1Q86Y38 959 aa5.25□□□□□ -1.57
USP48-211ENST00000526044 RPUSD2Q8IZ73 545 aaKnown RBP5.25□□□□□ -1.57
USP48-211ENST00000526044 REPS2Q8NFH8 660 aa5.25□□□□□ -1.57
USP48-211ENST00000526044 OR52N2Q8NGI0 321 aa5.25□□□□□ -1.57
USP48-211ENST00000526044 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.25□□□□□ -1.57
USP48-211ENST00000526044 HOXB13Q92826 284 aaPredicted RBP5.25□□□□□ -1.57
USP48-211ENST00000526044 PGBD4Q96DM1 585 aa5.25□□□□□ -1.57
USP48-211ENST00000526044 CYFIP2Q96F07 1278 aa5.25□□□□□ -1.57
USP48-211ENST00000526044 PLEKHG4BQ96PX9 1271 aa5.25□□□□□ -1.57
USP48-211ENST00000526044 SLC13A1Q9BZW2 595 aa5.25□□□□□ -1.57
USP48-211ENST00000526044 PIH1D3Q9NQM4 214 aaKnown RBP5.25□□□□□ -1.57
USP48-211ENST00000526044 SAP30BPQ9UHR5 308 aaKnown RBP5.25□□□□□ -1.57
USP48-211ENST00000526044 HDAC9Q9UKV0 1011 aa5.25□□□□□ -1.57
USP48-211ENST00000526044 PCDHGA9Q9Y5G4 932 aaKnown RBP5.25□□□□□ -1.57
USP48-211ENST00000526044 PCDHGA8Q9Y5G5 932 aa5.25□□□□□ -1.57
USP48-211ENST00000526044 PCDHGA7Q9Y5G6 932 aa5.25□□□□□ -1.57
USP48-211ENST00000526044 PCDHGA6Q9Y5G7 932 aa5.25□□□□□ -1.57
USP48-211ENST00000526044 PCDHGA3Q9Y5H0 932 aa5.25□□□□□ -1.57
USP48-211ENST00000526044 MYO5AQ9Y4I1 1855 aaKnown RBP5.25□□□□□ -1.57
USP48-211ENST00000526044 MYO3BQ8WXR4 1341 aa5.24□□□□□ -1.57
USP48-211ENST00000526044 TBKBP1A7MCY6 615 aa5.24□□□□□ -1.57
USP48-211ENST00000526044 CHMLP26374 656 aa5.24□□□□□ -1.57
USP48-211ENST00000526044 ADD2P35612 726 aa5.24□□□□□ -1.57
USP48-211ENST00000526044 MMP14P50281 582 aa5.24□□□□□ -1.57
USP48-211ENST00000526044 RBM5P52756 815 aaKnown RBP eCLIP5.24□□□□□ -1.57
USP48-211ENST00000526044 SLC16A1P53985 500 aa5.24□□□□□ -1.57
USP48-211ENST00000526044 MECOMQ03112 1051 aa5.24□□□□□ -1.57
USP48-211ENST00000526044 PTH1RQ03431 593 aa5.24□□□□□ -1.57
USP48-211ENST00000526044 SEPT2Q15019 361 aa5.24□□□□□ -1.57
USP48-211ENST00000526044 MIIPQ5JXC2 388 aa5.24□□□□□ -1.57
USP48-211ENST00000526044 NAA16Q6N069 864 aaPredicted RBP5.24□□□□□ -1.57
USP48-211ENST00000526044 DZIP1Q86YF9 867 aaKnown RBP5.24□□□□□ -1.57
USP48-211ENST00000526044 CERS5Q8N5B7 392 aa5.24□□□□□ -1.57
USP48-211ENST00000526044 MAGEB6Q8N7X4 407 aa5.24□□□□□ -1.57
USP48-211ENST00000526044 AGBL3Q8NEM8 1001 aa5.24□□□□□ -1.57
USP48-211ENST00000526044 NRG4Q8WWG1 115 aa5.24□□□□□ -1.57
USP48-211ENST00000526044 RUFY2Q8WXA3 655 aa5.24□□□□□ -1.57
USP48-211ENST00000526044 DPF2Q92785 391 aa5.24□□□□□ -1.57
USP48-211ENST00000526044 NSUN4Q96CB9 384 aaKnown RBP5.24□□□□□ -1.57
USP48-211ENST00000526044 ZNF503Q96F45 646 aa5.24□□□□□ -1.57
USP48-211ENST00000526044 CEP95Q96GE4 821 aa5.24□□□□□ -1.57
USP48-211ENST00000526044 C7orf25Q9BPX7 421 aa5.24□□□□□ -1.57
USP48-211ENST00000526044 ZNF747Q9BV97 191 aa5.24□□□□□ -1.57
USP48-211ENST00000526044 MXD3Q9BW11 206 aa5.24□□□□□ -1.57
USP48-211ENST00000526044 CPEB1Q9BZB8 566 aaKnown RBP5.24□□□□□ -1.57
USP48-211ENST00000526044 CSRNP2Q9H175 543 aa5.24□□□□□ -1.57
USP48-211ENST00000526044 VPS11Q9H270 941 aa5.24□□□□□ -1.57
USP48-211ENST00000526044 DIAPH3Q9NSV4 1193 aa5.24□□□□□ -1.57
USP48-211ENST00000526044 MOCS1Q9NZB8 636 aa5.24□□□□□ -1.57
USP48-211ENST00000526044 INTUQ9ULD6 942 aa5.24□□□□□ -1.57
USP48-211ENST00000526044 SCN9AQ15858 1988 aa5.24□□□□□ -1.57
USP48-211ENST00000526044 MAST3O60307 1309 aa5.23□□□□□ -1.57
USP48-211ENST00000526044 ZNF532Q9HCE3 1301 aa5.23□□□□□ -1.57
USP48-211ENST00000526044 PSME4Q14997 1843 aa5.23□□□□□ -1.57
USP48-211ENST00000526044 MYH7P12883 1935 aa5.23□□□□□ -1.57
USP48-211ENST00000526044 PJA2O43164 708 aa5.23□□□□□ -1.57
USP48-211ENST00000526044 PEX14O75381 377 aa5.23□□□□□ -1.57
USP48-211ENST00000526044 PARNO95453 639 aaKnown RBP5.23□□□□□ -1.57
USP48-211ENST00000526044 BAG3O95817 575 aa5.23□□□□□ -1.57
USP48-211ENST00000526044 C1SP09871 688 aa5.23□□□□□ -1.57
USP48-211ENST00000526044 C5AR1P21730 350 aa5.23□□□□□ -1.57
USP48-211ENST00000526044 RPS12P25398 132 aaKnown RBP5.23□□□□□ -1.57
USP48-211ENST00000526044 PRDX5P30044 214 aa5.23□□□□□ -1.57
USP48-211ENST00000526044 EXOSC10Q01780 885 aaKnown RBP5.23□□□□□ -1.57
USP48-211ENST00000526044 SP140Q13342 867 aa5.23□□□□□ -1.57
USP48-211ENST00000526044 BMT2Q1RMZ1 405 aa5.23□□□□□ -1.57
USP48-211ENST00000526044 MCMDC2Q4G0Z9 681 aa5.23□□□□□ -1.57
USP48-211ENST00000526044 RABL3Q5HYI8 236 aa5.23□□□□□ -1.57
USP48-211ENST00000526044 ANKS6Q68DC2 871 aa5.23□□□□□ -1.57
USP48-211ENST00000526044 EFCAB12Q6NXP0 572 aa5.23□□□□□ -1.57
USP48-211ENST00000526044 DRICH1Q6PGQ1 229 aaPredicted RBP5.23□□□□□ -1.57
USP48-211ENST00000526044 CWC27Q6UX04 472 aaKnown RBP5.23□□□□□ -1.57
USP48-211ENST00000526044 GPC2Q8N158 579 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms