RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 FAM228AQ86W67 206 aa14.17□□□□□ -0.14
LRRK1-202ENST00000525284 SSH3Q8TE77 659 aa14.17□□□□□ -0.14
LRRK1-202ENST00000525284 PPP1R14BQ96C90 147 aa14.17□□□□□ -0.14
LRRK1-202ENST00000525284 FAM167AQ96KS9 214 aa14.17□□□□□ -0.14
LRRK1-202ENST00000525284 MNTQ99583 582 aa14.17□□□□□ -0.14
LRRK1-202ENST00000525284 KCTD10Q9H3F6 313 aa14.17□□□□□ -0.14
LRRK1-202ENST00000525284 EHD3Q9NZN3 535 aa14.17□□□□□ -0.14
LRRK1-202ENST00000525284 COPG2Q9UBF2 871 aa14.17□□□□□ -0.14
LRRK1-202ENST00000525284 UBA2Q9UBT2 640 aaPredicted RBP14.17□□□□□ -0.14
LRRK1-202ENST00000525284 SPACA6W5XKT8 324 aa14.17□□□□□ -0.14
LRRK1-202ENST00000525284 FAM220BPB1ANY3 271 aa14.17□□□□□ -0.14
LRRK1-202ENST00000525284 STAT3P40763 770 aa14.17□□□□□ -0.14
LRRK1-202ENST00000525284 PTK6Q13882 451 aa14.17□□□□□ -0.14
LRRK1-202ENST00000525284 CASP12Q6UXS9 341 aa14.17□□□□□ -0.14
LRRK1-202ENST00000525284 GATAD2AQ86YP4 633 aa14.17□□□□□ -0.14
LRRK1-202ENST00000525284 ZNF333Q96JL9 665 aa14.17□□□□□ -0.14
LRRK1-202ENST00000525284 FAM111AQ96PZ2 611 aa14.17□□□□□ -0.14
LRRK1-202ENST00000525284 MRPL4Q9BYD3 311 aaKnown RBP14.17□□□□□ -0.14
LRRK1-202ENST00000525284 SLC35C2Q9NQQ7 365 aa14.17□□□□□ -0.14
LRRK1-202ENST00000525284 PHTF1Q9UMS5 762 aa14.17□□□□□ -0.14
LRRK1-202ENST00000525284 ABCC10Q5T3U5 1492 aa14.17□□□□□ -0.14
LRRK1-202ENST00000525284 POTECB2RU33 542 aa14.16□□□□□ -0.14
LRRK1-202ENST00000525284 FOXP2O15409 715 aa14.16□□□□□ -0.14
LRRK1-202ENST00000525284 ABCB1P08183 1280 aaPredicted RBP14.16□□□□□ -0.14
LRRK1-202ENST00000525284 TSPAN19P0C672 248 aa14.16□□□□□ -0.14
LRRK1-202ENST00000525284 ATG14Q6ZNE5 492 aa14.16□□□□□ -0.14
LRRK1-202ENST00000525284 MCEEQ96PE7 176 aa14.16□□□□□ -0.14
LRRK1-202ENST00000525284 NMRK2Q9NPI5 230 aa14.16□□□□□ -0.14
LRRK1-202ENST00000525284 SMARCAL1Q9NZC9 954 aa14.16□□□□□ -0.14
LRRK1-202ENST00000525284 CRLS1Q9UJA2 301 aa14.16□□□□□ -0.14
LRRK1-202ENST00000525284 FAM135BQ49AJ0 1406 aa14.16□□□□□ -0.14
LRRK1-202ENST00000525284 EFCAB10A6NFE3 127 aa14.16□□□□□ -0.14
LRRK1-202ENST00000525284 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.16□□□□□ -0.14
LRRK1-202ENST00000525284 TNPO2O14787 897 aaKnown RBP14.16□□□□□ -0.14
LRRK1-202ENST00000525284 PPEF1O14829 653 aaPredicted RBP14.16□□□□□ -0.14
LRRK1-202ENST00000525284 IFNAR1P17181 557 aa14.16□□□□□ -0.14
LRRK1-202ENST00000525284 POU5F1Q01860 360 aaKnown RBP14.16□□□□□ -0.14
LRRK1-202ENST00000525284 MTF1Q14872 753 aa14.16□□□□□ -0.14
LRRK1-202ENST00000525284 SAPCD2Q86UD0 394 aa14.16□□□□□ -0.14
LRRK1-202ENST00000525284 CDK20Q8IZL9 346 aa14.16□□□□□ -0.14
LRRK1-202ENST00000525284 GPRASP2Q96D09 838 aa14.16□□□□□ -0.14
LRRK1-202ENST00000525284 L3MBTL3Q96JM7 780 aaPredicted RBP14.16□□□□□ -0.14
LRRK1-202ENST00000525284 SEPHS2Q99611 448 aa14.16□□□□□ -0.14
LRRK1-202ENST00000525284 APOL4Q9BPW4 351 aa14.16□□□□□ -0.14
LRRK1-202ENST00000525284 KCTD14Q9BQ13 255 aaPredicted RBP14.16□□□□□ -0.14
LRRK1-202ENST00000525284 CMTM6Q9NX76 183 aa14.16□□□□□ -0.14
LRRK1-202ENST00000525284 SLC25A13Q9UJS0 675 aa14.16□□□□□ -0.14
LRRK1-202ENST00000525284 KDM5CP41229 1560 aa14.16□□□□□ -0.14
LRRK1-202ENST00000525284 EXTL3O43909 919 aa14.16□□□□□ -0.14
LRRK1-202ENST00000525284 PDGFRAP16234 1089 aa14.16□□□□□ -0.14
LRRK1-202ENST00000525284 TSNQ15631 228 aaKnown RBP14.16□□□□□ -0.14
LRRK1-202ENST00000525284 CAMKK2Q96RR4 588 aa14.16□□□□□ -0.14
LRRK1-202ENST00000525284 LSM7Q9UK45 103 aaKnown RBP14.16□□□□□ -0.14
LRRK1-202ENST00000525284 SNX12Q9UMY4 172 aa14.16□□□□□ -0.14
LRRK1-202ENST00000525284 SNX8Q9Y5X2 465 aa14.16□□□□□ -0.14
LRRK1-202ENST00000525284 PNMA8CA0A1B0GUJ8 204 aa14.16□□□□□ -0.14
LRRK1-202ENST00000525284 RAD51BO15315 384 aa14.16□□□□□ -0.14
LRRK1-202ENST00000525284 PEX5P50542 639 aa14.16□□□□□ -0.14
LRRK1-202ENST00000525284 ITGA1P56199 1179 aa14.16□□□□□ -0.14
LRRK1-202ENST00000525284 PTGISQ16647 500 aa14.16□□□□□ -0.14
LRRK1-202ENST00000525284 FAM83EQ2M2I3 478 aa14.16□□□□□ -0.14
LRRK1-202ENST00000525284 OTUD3Q5T2D3 398 aaPredicted RBP14.16□□□□□ -0.14
LRRK1-202ENST00000525284 SWSAP1Q6NVH7 229 aa14.16□□□□□ -0.14
LRRK1-202ENST00000525284 FAM160B2Q86V87 743 aa14.16□□□□□ -0.14
LRRK1-202ENST00000525284 WDR60Q8WVS4 1066 aa14.16□□□□□ -0.14
LRRK1-202ENST00000525284 USP13Q92995 863 aaPredicted RBP14.16□□□□□ -0.14
LRRK1-202ENST00000525284 C18orf8Q96DM3 657 aa14.16□□□□□ -0.14
LRRK1-202ENST00000525284 ZIM3Q96PE6 472 aa14.16□□□□□ -0.14
LRRK1-202ENST00000525284 ZNF341Q9BYN7 854 aa14.16□□□□□ -0.14
LRRK1-202ENST00000525284 HMG20AQ9NP66 347 aa14.16□□□□□ -0.14
LRRK1-202ENST00000525284 TRPC4Q9UBN4 977 aa14.16□□□□□ -0.14
LRRK1-202ENST00000525284 UTYO14607 1347 aa14.16□□□□□ -0.14
LRRK1-202ENST00000525284 TIMM44O43615 452 aa14.16□□□□□ -0.14
LRRK1-202ENST00000525284 CD2BP2O95400 341 aaKnown RBP14.16□□□□□ -0.14
LRRK1-202ENST00000525284 LARGE1O95461 756 aa14.16□□□□□ -0.14
LRRK1-202ENST00000525284 PAICSP22234 425 aaKnown RBP14.16□□□□□ -0.14
LRRK1-202ENST00000525284 RCVRNP35243 200 aa14.16□□□□□ -0.14
LRRK1-202ENST00000525284 CORO7P57737 925 aa14.16□□□□□ -0.14
LRRK1-202ENST00000525284 TBCELQ5QJ74 424 aa14.16□□□□□ -0.14
LRRK1-202ENST00000525284 DENND1BQ6P3S1 775 aa14.16□□□□□ -0.14
LRRK1-202ENST00000525284 LRRC34Q8IZ02 419 aa14.16□□□□□ -0.14
LRRK1-202ENST00000525284 LEMD2Q8NC56 503 aa14.16□□□□□ -0.14
LRRK1-202ENST00000525284 PTGES3LE9PB15 166 aa14.15□□□□□ -0.14
LRRK1-202ENST00000525284 MYL12BO14950 172 aa14.15□□□□□ -0.14
LRRK1-202ENST00000525284 TCEA3O75764 348 aa14.15□□□□□ -0.14
LRRK1-202ENST00000525284 GRAP2O75791 330 aa14.15□□□□□ -0.14
LRRK1-202ENST00000525284 PCNAP12004 261 aa14.15□□□□□ -0.14
LRRK1-202ENST00000525284 S100A1P23297 94 aa14.15□□□□□ -0.14
LRRK1-202ENST00000525284 ITGA8P53708 1063 aa14.15□□□□□ -0.14
LRRK1-202ENST00000525284 SVOPQ8N4V2 548 aa14.15□□□□□ -0.14
LRRK1-202ENST00000525284 RUBCNQ92622 972 aa14.15□□□□□ -0.14
LRRK1-202ENST00000525284 ZNF669Q96BR6 464 aaPredicted RBP14.15□□□□□ -0.14
LRRK1-202ENST00000525284 DKK3Q9UBP4 350 aa14.15□□□□□ -0.14
LRRK1-202ENST00000525284 RABGEF1Q9UJ41 708 aa14.15□□□□□ -0.14
LRRK1-202ENST00000525284 LCA5LO95447 670 aa14.15□□□□□ -0.14
LRRK1-202ENST00000525284 KRT35Q92764 455 aa14.15□□□□□ -0.14
LRRK1-202ENST00000525284 RUVBL2Q9Y230 463 aaKnown RBP14.15□□□□□ -0.14
LRRK1-202ENST00000525284 ZFYVE9O95405 1425 aa14.15□□□□□ -0.14
LRRK1-202ENST00000525284 ECE2O60344 883 aa14.15□□□□□ -0.14
LRRK1-202ENST00000525284 RMDN3Q96TC7 470 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms