RNA–Protein interactions for RNA: ENST00000525132.1

CSDE1-209, Transcript of cold shock domain containing E1, humanhuman

TSL 5

Gene CSDE1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-209ENST00000525132 TMEM169Q96HH4 297 aa3.75□□□□□ -1.81
CSDE1-209ENST00000525132 SIGLEC10Q96LC7 697 aa3.75□□□□□ -1.81
CSDE1-209ENST00000525132 CDC6Q99741 560 aa3.75□□□□□ -1.81
CSDE1-209ENST00000525132 SMR3AQ99954 134 aa3.75□□□□□ -1.81
CSDE1-209ENST00000525132 DDX50Q9BQ39 737 aaKnown RBP3.75□□□□□ -1.81
CSDE1-209ENST00000525132 PCGF6Q9BYE7 350 aa3.75□□□□□ -1.81
CSDE1-209ENST00000525132 PLA2G12AQ9BZM1 189 aa3.75□□□□□ -1.81
CSDE1-209ENST00000525132 SPRTNQ9H040 489 aaPredicted RBP3.75□□□□□ -1.81
CSDE1-209ENST00000525132 RXFP1Q9HBX9 757 aa3.75□□□□□ -1.81
CSDE1-209ENST00000525132 ARMCX1Q9P291 453 aa3.75□□□□□ -1.81
CSDE1-209ENST00000525132 MAPRE3Q9UPY8 281 aa3.75□□□□□ -1.81
CSDE1-209ENST00000525132 APOBEC2Q9Y235 224 aaKnown RBP3.75□□□□□ -1.81
CSDE1-209ENST00000525132 TRAF6Q9Y4K3 522 aa3.75□□□□□ -1.81
CSDE1-209ENST00000525132 MAP1AP78559 2803 aaPredicted RBP3.75□□□□□ -1.81
CSDE1-209ENST00000525132 CNTNAP2Q9UHC6 1331 aa3.74□□□□□ -1.81
CSDE1-209ENST00000525132 GSG1L2A8MUP6 293 aa3.74□□□□□ -1.81
CSDE1-209ENST00000525132 ERVV-1B6SEH8 477 aa3.74□□□□□ -1.81
CSDE1-209ENST00000525132 PLD2O14939 933 aa3.74□□□□□ -1.81
CSDE1-209ENST00000525132 CTAGE5O15320 804 aa3.74□□□□□ -1.81
CSDE1-209ENST00000525132 NCAM2O15394 837 aa3.74□□□□□ -1.81
CSDE1-209ENST00000525132 PLIN1O60240 522 aa3.74□□□□□ -1.81
CSDE1-209ENST00000525132 KATNA1O75449 491 aa3.74□□□□□ -1.81
CSDE1-209ENST00000525132 CNMDO75829 334 aa3.74□□□□□ -1.81
CSDE1-209ENST00000525132 RECQL4O94761 1208 aa3.74□□□□□ -1.81
CSDE1-209ENST00000525132 TACC2O95359 2948 aa3.74□□□□□ -1.81
CSDE1-209ENST00000525132 DDAH2O95865 285 aa3.74□□□□□ -1.81
CSDE1-209ENST00000525132 AMHP03971 560 aa3.74□□□□□ -1.81
CSDE1-209ENST00000525132 SUPT20HL2P0C7V6 817 aa3.74□□□□□ -1.81
CSDE1-209ENST00000525132 CPEP16870 476 aa3.74□□□□□ -1.81
CSDE1-209ENST00000525132 IL4RP24394 825 aa3.74□□□□□ -1.81
CSDE1-209ENST00000525132 CFPP27918 469 aa3.74□□□□□ -1.81
CSDE1-209ENST00000525132 MC3RP41968 323 aa3.74□□□□□ -1.81
CSDE1-209ENST00000525132 CXCL12P48061 93 aa3.74□□□□□ -1.81
CSDE1-209ENST00000525132 RAB27AP51159 221 aa3.74□□□□□ -1.81
CSDE1-209ENST00000525132 CCR3P51677 355 aa3.74□□□□□ -1.81
CSDE1-209ENST00000525132 UCNP55089 124 aa3.74□□□□□ -1.81
CSDE1-209ENST00000525132 SPP2Q13103 211 aa3.74□□□□□ -1.81
CSDE1-209ENST00000525132 NONOQ15233 471 aaKnown RBP eCLIP3.74□□□□□ -1.812e-6■■□□□ 12.7
CSDE1-209ENST00000525132 CR1LQ2VPA4 569 aa3.74□□□□□ -1.81
CSDE1-209ENST00000525132 FNDC3BQ53EP0 1204 aaKnown RBP3.74□□□□□ -1.81
CSDE1-209ENST00000525132 SLC44A4Q53GD3 710 aa3.74□□□□□ -1.81
CSDE1-209ENST00000525132 ATAT1Q5SQI0 421 aa3.74□□□□□ -1.81
CSDE1-209ENST00000525132 PPP4R4Q6NUP7 873 aa3.74□□□□□ -1.81
CSDE1-209ENST00000525132 ABHD17CQ6PCB6 329 aa3.74□□□□□ -1.81
CSDE1-209ENST00000525132 TIPARPQ7Z3E1 657 aaKnown RBP3.74□□□□□ -1.81
CSDE1-209ENST00000525132 B3GNT8Q7Z7M8 397 aa3.74□□□□□ -1.81
CSDE1-209ENST00000525132 C14orf80Q86SX3 495 aa3.74□□□□□ -1.81
CSDE1-209ENST00000525132 CHPFQ8IZ52 775 aa3.74□□□□□ -1.81
CSDE1-209ENST00000525132 LINC00482Q8N8I6 264 aa3.74□□□□□ -1.81
CSDE1-209ENST00000525132 TP53I13Q8NBR0 393 aaPredicted RBP3.74□□□□□ -1.81
CSDE1-209ENST00000525132 ARSGQ96EG1 525 aa3.74□□□□□ -1.81
CSDE1-209ENST00000525132 TMEM176AQ96HP8 235 aa3.74□□□□□ -1.81
CSDE1-209ENST00000525132 MAML3Q96JK9 1138 aa3.74□□□□□ -1.81
CSDE1-209ENST00000525132 CLUHP3Q96NS8 147 aa3.74□□□□□ -1.81
CSDE1-209ENST00000525132 IPO9Q96P70 1041 aaKnown RBP3.74□□□□□ -1.81
CSDE1-209ENST00000525132 EPB41L1Q9H4G0 881 aa3.74□□□□□ -1.81
CSDE1-209ENST00000525132 SLC2A4RGQ9NR83 387 aa3.74□□□□□ -1.81
CSDE1-209ENST00000525132 DBF4Q9UBU7 674 aaPredicted RBP3.74□□□□□ -1.81
CSDE1-209ENST00000525132 PALD1Q9ULE6 856 aa3.74□□□□□ -1.81
CSDE1-209ENST00000525132 WNT6Q9Y6F9 365 aa3.74□□□□□ -1.81
CSDE1-209ENST00000525132 NUP98P52948 1817 aa3.74□□□□□ -1.81
CSDE1-209ENST00000525132 LRP4O75096 1905 aa3.74□□□□□ -1.81
CSDE1-209ENST00000525132 SVEP1Q4LDE5 3571 aa3.73□□□□□ -1.81
CSDE1-209ENST00000525132 TENM3Q9P273 2699 aa3.73□□□□□ -1.81
CSDE1-209ENST00000525132 BCLAF3A2AJT9 711 aaKnown RBP3.73□□□□□ -1.81
CSDE1-209ENST00000525132 DDTLA6NHG4 134 aaPredicted RBP3.73□□□□□ -1.81
CSDE1-209ENST00000525132 K7ESF4 209 aa3.73□□□□□ -1.81
CSDE1-209ENST00000525132 AQP7O14520 342 aa3.73□□□□□ -1.81
CSDE1-209ENST00000525132 RNMTO43148 476 aaKnown RBP3.73□□□□□ -1.81
CSDE1-209ENST00000525132 ADCY6O43306 1168 aa3.73□□□□□ -1.81
CSDE1-209ENST00000525132 NBNO60934 754 aa3.73□□□□□ -1.81
CSDE1-209ENST00000525132 DUSP11O75319 330 aaKnown RBP3.73□□□□□ -1.81
CSDE1-209ENST00000525132 RPP40O75818 363 aaKnown RBP3.73□□□□□ -1.81
CSDE1-209ENST00000525132 SOD2P04179 222 aa3.73□□□□□ -1.81
CSDE1-209ENST00000525132 AMY2AP04746 511 aa3.73□□□□□ -1.81
CSDE1-209ENST00000525132 AMY2BP19961 511 aa3.73□□□□□ -1.81
CSDE1-209ENST00000525132 PHKA1P46020 1223 aa3.73□□□□□ -1.81
CSDE1-209ENST00000525132 NCKAP1LP55160 1127 aa3.73□□□□□ -1.81
CSDE1-209ENST00000525132 GPC5P78333 572 aa3.73□□□□□ -1.81
CSDE1-209ENST00000525132 MCL1Q07820 350 aa3.73□□□□□ -1.81
CSDE1-209ENST00000525132 HDAC1Q13547 482 aaPredicted RBP3.73□□□□□ -1.81
CSDE1-209ENST00000525132 HNRNPDQ14103 355 aaKnown RBP3.73□□□□□ -1.81
CSDE1-209ENST00000525132 MLF2Q15773 248 aaPredicted RBP3.73□□□□□ -1.81
CSDE1-209ENST00000525132 KRTAP19-4Q3LI73 84 aa3.73□□□□□ -1.81
CSDE1-209ENST00000525132 PRR31Q5SQ13 230 aa3.73□□□□□ -1.81
CSDE1-209ENST00000525132 RARS2Q5T160 578 aaKnown RBP3.73□□□□□ -1.81
CSDE1-209ENST00000525132 APBB1IPQ7Z5R6 666 aaPredicted RBP3.73□□□□□ -1.81
CSDE1-209ENST00000525132 FGD2Q7Z6J4 655 aa3.73□□□□□ -1.81
CSDE1-209ENST00000525132 STRA8Q7Z7C7 330 aa3.73□□□□□ -1.81
CSDE1-209ENST00000525132 LRRTM3Q86VH5 581 aa3.73□□□□□ -1.81
CSDE1-209ENST00000525132 ULK2Q8IYT8 1036 aa3.73□□□□□ -1.81
CSDE1-209ENST00000525132 IFNL3Q8IZI9 196 aa3.73□□□□□ -1.81
CSDE1-209ENST00000525132 MYO1HQ8N1T3 1032 aa3.73□□□□□ -1.81
CSDE1-209ENST00000525132 AFAP1L2Q8N4X5 818 aa3.73□□□□□ -1.81
CSDE1-209ENST00000525132 PANK1Q8TE04 598 aa3.73□□□□□ -1.81
CSDE1-209ENST00000525132 LEO1Q8WVC0 666 aaPredicted RBP3.73□□□□□ -1.81
CSDE1-209ENST00000525132 GAB3Q8WWW8 586 aa3.73□□□□□ -1.81
CSDE1-209ENST00000525132 MIB2Q96AX9 1013 aa3.73□□□□□ -1.81
CSDE1-209ENST00000525132 EVI5LQ96CN4 794 aa3.73□□□□□ -1.81
CSDE1-209ENST00000525132 LGMNQ99538 433 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms