RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 ITFG1Q8TB96 612 aa5.73□□□□□ -1.49
HMGB1P40-201ENST00000525121 SLC2A14Q8TDB8 520 aa5.73□□□□□ -1.49
HMGB1P40-201ENST00000525121 GPR152Q8TDT2 470 aa5.73□□□□□ -1.49
HMGB1P40-201ENST00000525121 SMARCD2Q92925 531 aa5.73□□□□□ -1.49
HMGB1P40-201ENST00000525121 JAKMIP2Q96AA8 810 aa5.73□□□□□ -1.49
HMGB1P40-201ENST00000525121 E2F7Q96AV8 911 aa5.73□□□□□ -1.49
HMGB1P40-201ENST00000525121 ELMO3Q96BJ8 720 aa5.73□□□□□ -1.49
HMGB1P40-201ENST00000525121 MCRS1Q96EZ8 462 aa5.73□□□□□ -1.49
HMGB1P40-201ENST00000525121 CYFIP2Q96F07 1278 aa5.73□□□□□ -1.49
HMGB1P40-201ENST00000525121 TRMT2BQ96GJ1 504 aaKnown RBP5.73□□□□□ -1.49
HMGB1P40-201ENST00000525121 TMEM176AQ96HP8 235 aa5.73□□□□□ -1.49
HMGB1P40-201ENST00000525121 SPATA17Q96L03 361 aa5.73□□□□□ -1.49
HMGB1P40-201ENST00000525121 PCMTD1Q96MG8 357 aaPredicted RBP5.73□□□□□ -1.49
HMGB1P40-201ENST00000525121 MYADMQ96S97 322 aa5.73□□□□□ -1.49
HMGB1P40-201ENST00000525121 ARID3AQ99856 593 aa5.73□□□□□ -1.49
HMGB1P40-201ENST00000525121 C1QTNF1Q9BXJ1 281 aa5.73□□□□□ -1.49
HMGB1P40-201ENST00000525121 B3GNT5Q9BYG0 378 aa5.73□□□□□ -1.49
HMGB1P40-201ENST00000525121 ZNF518BQ9C0D4 1074 aa5.73□□□□□ -1.49
HMGB1P40-201ENST00000525121 SDCBP2Q9H190 292 aa5.73□□□□□ -1.49
HMGB1P40-201ENST00000525121 CRISPLD1Q9H336 500 aa5.73□□□□□ -1.49
HMGB1P40-201ENST00000525121 NDST4Q9H3R1 872 aa5.73□□□□□ -1.49
HMGB1P40-201ENST00000525121 ZFP14Q9HCL3 533 aa5.73□□□□□ -1.49
HMGB1P40-201ENST00000525121 TRPM5Q9NZQ8 1165 aa5.73□□□□□ -1.49
HMGB1P40-201ENST00000525121 HMGXB4Q9UGU5 601 aa5.73□□□□□ -1.49
HMGB1P40-201ENST00000525121 MUTYHQ9UIF7 546 aa5.73□□□□□ -1.49
HMGB1P40-201ENST00000525121 FBXL21Q9UKT6 434 aa5.73□□□□□ -1.49
HMGB1P40-201ENST00000525121 KIAA1257Q9ULG3 409 aa5.73□□□□□ -1.49
HMGB1P40-201ENST00000525121 PCDHB4Q9Y5E5 795 aa5.73□□□□□ -1.49
HMGB1P40-201ENST00000525121 VWA8A3KMH1 1905 aa5.73□□□□□ -1.49
HMGB1P40-201ENST00000525121 TRAV19A0A0A6YYK7 116 aa5.72□□□□□ -1.49
HMGB1P40-201ENST00000525121 SYCE3A1L190 88 aa5.72□□□□□ -1.49
HMGB1P40-201ENST00000525121 SOBPA7XYQ1 873 aa5.72□□□□□ -1.49
HMGB1P40-201ENST00000525121 CLDN5O00501 218 aa5.72□□□□□ -1.49
HMGB1P40-201ENST00000525121 MED7O43513 233 aa5.72□□□□□ -1.49
HMGB1P40-201ENST00000525121 ECI2O75521 394 aa5.72□□□□□ -1.49
HMGB1P40-201ENST00000525121 ABL1P00519 1130 aa5.72□□□□□ -1.49
HMGB1P40-201ENST00000525121 CKMP06732 381 aa5.72□□□□□ -1.49
HMGB1P40-201ENST00000525121 ASGR2P07307 311 aa5.72□□□□□ -1.49
HMGB1P40-201ENST00000525121 PAEPP09466 180 aa5.72□□□□□ -1.49
HMGB1P40-201ENST00000525121 VDRP11473 427 aa5.72□□□□□ -1.49
HMGB1P40-201ENST00000525121 GJA1P17302 382 aa5.72□□□□□ -1.49
HMGB1P40-201ENST00000525121 NPR3P17342 541 aa5.72□□□□□ -1.49
HMGB1P40-201ENST00000525121 YWHAQP27348 245 aa5.72□□□□□ -1.49
HMGB1P40-201ENST00000525121 USP8P40818 1118 aa5.72□□□□□ -1.49
HMGB1P40-201ENST00000525121 GPR15P49685 360 aa5.72□□□□□ -1.49
HMGB1P40-201ENST00000525121 ZNF165P49910 485 aa5.72□□□□□ -1.49
HMGB1P40-201ENST00000525121 BCAT1P54687 386 aa5.72□□□□□ -1.49
HMGB1P40-201ENST00000525121 RAD23BP54727 409 aa5.72□□□□□ -1.49
HMGB1P40-201ENST00000525121 MAP3K7CLP57077 242 aa5.72□□□□□ -1.49
HMGB1P40-201ENST00000525121 PFKPQ01813 784 aa5.72□□□□□ -1.49
HMGB1P40-201ENST00000525121 HTR4Q13639 388 aa5.72□□□□□ -1.49
HMGB1P40-201ENST00000525121 CCDC142Q17RM4 750 aa5.72□□□□□ -1.49
HMGB1P40-201ENST00000525121 GOLGA7BQ2TAP0 167 aa5.72□□□□□ -1.49
HMGB1P40-201ENST00000525121 FILIP1LQ4L180 1135 aa5.72□□□□□ -1.49
HMGB1P40-201ENST00000525121 PRSS36Q5K4E3 855 aa5.72□□□□□ -1.49
HMGB1P40-201ENST00000525121 SDHAF4Q5VUM1 108 aa5.72□□□□□ -1.49
HMGB1P40-201ENST00000525121 SMYD5Q6GMV2 418 aa5.72□□□□□ -1.49
HMGB1P40-201ENST00000525121 TRIM65Q6PJ69 517 aa5.72□□□□□ -1.49
HMGB1P40-201ENST00000525121 TMEM270Q6UE05 265 aa5.72□□□□□ -1.49
HMGB1P40-201ENST00000525121 RRAGAQ7L523 313 aa5.72□□□□□ -1.49
HMGB1P40-201ENST00000525121 TMC8Q8IU68 726 aa5.72□□□□□ -1.49
HMGB1P40-201ENST00000525121 FUKQ8N0W3 1084 aa5.72□□□□□ -1.49
HMGB1P40-201ENST00000525121 NUP93Q8N1F7 819 aa5.72□□□□□ -1.49
HMGB1P40-201ENST00000525121 C12orf29Q8N999 325 aa5.72□□□□□ -1.49
HMGB1P40-201ENST00000525121 RBBP8NLQ8NC74 664 aaPredicted RBP5.72□□□□□ -1.49
HMGB1P40-201ENST00000525121 SHKBP1Q8TBC3 707 aa5.72□□□□□ -1.49
HMGB1P40-201ENST00000525121 ZSCAN18Q8TBC5 510 aaPredicted RBP5.72□□□□□ -1.49
HMGB1P40-201ENST00000525121 OVCA2Q8WZ82 227 aa5.72□□□□□ -1.49
HMGB1P40-201ENST00000525121 TATDN2Q93075 761 aa5.72□□□□□ -1.49
HMGB1P40-201ENST00000525121 FBXO32Q969P5 355 aa5.72□□□□□ -1.49
HMGB1P40-201ENST00000525121 ELSPBP1Q96BH3 223 aa5.72□□□□□ -1.49
HMGB1P40-201ENST00000525121 TCEAL4Q96EI5 215 aa5.72□□□□□ -1.49
HMGB1P40-201ENST00000525121 MYRFLQ96LU7 910 aa5.72□□□□□ -1.49
HMGB1P40-201ENST00000525121 MED15Q96RN5 788 aa5.72□□□□□ -1.49
HMGB1P40-201ENST00000525121 HNRNPABQ99729 332 aaKnown RBP5.72□□□□□ -1.49
HMGB1P40-201ENST00000525121 KXD1Q9BQD3 176 aa5.72□□□□□ -1.49
HMGB1P40-201ENST00000525121 BPIFA3Q9BQP9 254 aa5.72□□□□□ -1.49
HMGB1P40-201ENST00000525121 CRACR2AQ9BSW2 395 aa5.72□□□□□ -1.49
HMGB1P40-201ENST00000525121 NACA2Q9H009 215 aa5.72□□□□□ -1.49
HMGB1P40-201ENST00000525121 MFSD1Q9H3U5 465 aa5.72□□□□□ -1.49
HMGB1P40-201ENST00000525121 FBXO44Q9H4M3 255 aa5.72□□□□□ -1.49
HMGB1P40-201ENST00000525121 TASP1Q9H6P5 420 aa5.72□□□□□ -1.49
HMGB1P40-201ENST00000525121 KIF9Q9HAQ2 790 aa5.72□□□□□ -1.49
HMGB1P40-201ENST00000525121 KCNK12Q9HB15 430 aa5.72□□□□□ -1.49
HMGB1P40-201ENST00000525121 TRPC7Q9HCX4 862 aa5.72□□□□□ -1.49
HMGB1P40-201ENST00000525121 ZNF334Q9HCZ1 680 aaPredicted RBP5.72□□□□□ -1.49
HMGB1P40-201ENST00000525121 PNPLA8Q9NP80 782 aa5.72□□□□□ -1.49
HMGB1P40-201ENST00000525121 UBE2TQ9NPD8 197 aaPredicted RBP5.72□□□□□ -1.49
HMGB1P40-201ENST00000525121 SAMSN1Q9NSI8 373 aaKnown RBP5.72□□□□□ -1.49
HMGB1P40-201ENST00000525121 FANCLQ9NW38 375 aa5.72□□□□□ -1.49
HMGB1P40-201ENST00000525121 THG1LQ9NWX6 298 aaKnown RBP5.72□□□□□ -1.49
HMGB1P40-201ENST00000525121 COMMD8Q9NX08 183 aa5.72□□□□□ -1.49
HMGB1P40-201ENST00000525121 TAB2Q9NYJ8 693 aa5.72□□□□□ -1.49
HMGB1P40-201ENST00000525121 APEX2Q9UBZ4 518 aa5.72□□□□□ -1.49
HMGB1P40-201ENST00000525121 CEP83Q9Y592 693 aa5.72□□□□□ -1.49
HMGB1P40-201ENST00000525121 NUMBLQ9Y6R0 609 aa5.72□□□□□ -1.49
HMGB1P40-201ENST00000525121 TRIP11Q15643 1979 aa5.72□□□□□ -1.49
HMGB1P40-201ENST00000525121 TRANK1O15050 2925 aa5.72□□□□□ -1.49
HMGB1P40-201ENST00000525121 MYO7AQ13402 2215 aa5.71□□□□□ -1.49
HMGB1P40-201ENST00000525121 SCN1AP35498 2009 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms