RNA–Protein interactions for RNA: ENST00000524843.5

CASP4-204, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 978 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-204ENST00000524843 NKD2Q969F2 451 aaPredicted RBP7.85□□□□□ -1.15
CASP4-204ENST00000524843 TNIP3Q96KP6 325 aa7.85□□□□□ -1.15
CASP4-204ENST00000524843 CCDC114Q96M63 670 aa7.85□□□□□ -1.15
CASP4-204ENST00000524843 HEXIM2Q96MH2 286 aaKnown RBP7.85□□□□□ -1.15
CASP4-204ENST00000524843 CNPY3Q9BT09 278 aa7.85□□□□□ -1.15
CASP4-204ENST00000524843 NEUROG2Q9H2A3 272 aa7.85□□□□□ -1.15
CASP4-204ENST00000524843 CNOT10Q9H9A5 744 aaKnown RBP7.85□□□□□ -1.15
CASP4-204ENST00000524843 PPCSQ9HAB8 311 aa7.85□□□□□ -1.15
CASP4-204ENST00000524843 PRDM16Q9HAZ2 1276 aa7.85□□□□□ -1.15
CASP4-204ENST00000524843 PCDH9Q9HC56 1237 aa7.85□□□□□ -1.15
CASP4-204ENST00000524843 NMRK2Q9NPI5 230 aa7.85□□□□□ -1.15
CASP4-204ENST00000524843 PRDM10Q9NQV6 1147 aa7.85□□□□□ -1.15
CASP4-204ENST00000524843 CHST12Q9NRB3 414 aa7.85□□□□□ -1.15
CASP4-204ENST00000524843 METTL5Q9NRN9 209 aaKnown RBP7.85□□□□□ -1.15
CASP4-204ENST00000524843 SNTG2Q9NY99 539 aa7.85□□□□□ -1.15
CASP4-204ENST00000524843 FLRT1Q9NZU1 646 aa7.85□□□□□ -1.15
CASP4-204ENST00000524843 TSPAN16Q9UKR8 245 aa7.85□□□□□ -1.15
CASP4-204ENST00000524843 DRG1Q9Y295 367 aaKnown RBP7.85□□□□□ -1.15
CASP4-204ENST00000524843 USTQ9Y2C2 406 aa7.85□□□□□ -1.15
CASP4-204ENST00000524843 SNX24Q9Y343 169 aa7.85□□□□□ -1.15
CASP4-204ENST00000524843 SCN1AP35498 2009 aa7.85□□□□□ -1.15
CASP4-204ENST00000524843 TRIP12Q14669 1992 aaPredicted RBP7.84□□□□□ -1.15
CASP4-204ENST00000524843 TCRBV7S2A1N4TA0A589 114 aa7.84□□□□□ -1.15
CASP4-204ENST00000524843 ARHGEF37A1IGU5 675 aa7.84□□□□□ -1.15
CASP4-204ENST00000524843 LRRD1A4D1F6 860 aa7.84□□□□□ -1.15
CASP4-204ENST00000524843 FAM155AB1AL88 458 aaPredicted RBP7.84□□□□□ -1.15
CASP4-204ENST00000524843 H0YGN5 161 aa7.84□□□□□ -1.15
CASP4-204ENST00000524843 PIRO00625 290 aa7.84□□□□□ -1.15
CASP4-204ENST00000524843 SEPT4O43236 478 aa7.84□□□□□ -1.15
CASP4-204ENST00000524843 LIASO43766 372 aa7.84□□□□□ -1.15
CASP4-204ENST00000524843 LRCH4O75427 683 aa7.84□□□□□ -1.15
CASP4-204ENST00000524843 CSDE1O75534 798 aaKnown RBP7.84□□□□□ -1.15
CASP4-204ENST00000524843 ITGAVP06756 1048 aa7.84□□□□□ -1.15
CASP4-204ENST00000524843 ABHD2P08910 425 aa7.84□□□□□ -1.15
CASP4-204ENST00000524843 RARBP10826 455 aa7.84□□□□□ -1.15
CASP4-204ENST00000524843 WARSP23381 471 aaKnown RBP7.84□□□□□ -1.15
CASP4-204ENST00000524843 ATP5DP30049 168 aa7.84□□□□□ -1.15
CASP4-204ENST00000524843 ACTN2P35609 894 aa7.84□□□□□ -1.15
CASP4-204ENST00000524843 GJC1P36383 396 aa7.84□□□□□ -1.15
CASP4-204ENST00000524843 CDKN2BP42772 138 aa7.84□□□□□ -1.15
CASP4-204ENST00000524843 RPL34P49207 117 aaKnown RBP7.84□□□□□ -1.15
CASP4-204ENST00000524843 ZNF143P52747 638 aaPredicted RBP7.84□□□□□ -1.15
CASP4-204ENST00000524843 PLTPP55058 493 aa7.84□□□□□ -1.15
CASP4-204ENST00000524843 RPL7AP62424 266 aaKnown RBP7.84□□□□□ -1.15
CASP4-204ENST00000524843 ZNF844Q08AG5 666 aa7.84□□□□□ -1.15
CASP4-204ENST00000524843 CRHR2Q13324 411 aa7.84□□□□□ -1.15
CASP4-204ENST00000524843 TFDP2Q14188 446 aa7.84□□□□□ -1.15
CASP4-204ENST00000524843 GOLGA7BQ2TAP0 167 aa7.84□□□□□ -1.15
CASP4-204ENST00000524843 PKDCCQ504Y2 493 aa7.84□□□□□ -1.15
CASP4-204ENST00000524843 FAM47CQ5HY64 1035 aa7.84□□□□□ -1.15
CASP4-204ENST00000524843 FAM102AQ5T9C2 384 aaPredicted RBP7.84□□□□□ -1.15
CASP4-204ENST00000524843 CYP4A22Q5TCH4 519 aa7.84□□□□□ -1.15
CASP4-204ENST00000524843 RHBDF2Q6PJF5 856 aa7.84□□□□□ -1.15
CASP4-204ENST00000524843 BBS12Q6ZW61 710 aa7.84□□□□□ -1.15
CASP4-204ENST00000524843 LIMS2Q7Z4I7 341 aa7.84□□□□□ -1.15
CASP4-204ENST00000524843 PCGF5Q86SE9 256 aa7.84□□□□□ -1.15
CASP4-204ENST00000524843 DDX42Q86XP3 938 aaKnown RBP eCLIP7.84□□□□□ -1.15
CASP4-204ENST00000524843 CPNE8Q86YQ8 564 aa7.84□□□□□ -1.15
CASP4-204ENST00000524843 ZDHHC14Q8IZN3 488 aa7.84□□□□□ -1.15
CASP4-204ENST00000524843 TMEM86AQ8N2M4 240 aa7.84□□□□□ -1.15
CASP4-204ENST00000524843 RIBC1Q8N443 379 aaPredicted RBP7.84□□□□□ -1.15
CASP4-204ENST00000524843 TTC25Q96NG3 672 aa7.84□□□□□ -1.15
CASP4-204ENST00000524843 TWNKQ96RR1 684 aa7.84□□□□□ -1.15
CASP4-204ENST00000524843 CPXM1Q96SM3 734 aa7.84□□□□□ -1.15
CASP4-204ENST00000524843 SLC4A5Q9BY07 1137 aa7.84□□□□□ -1.15
CASP4-204ENST00000524843 EIF2AQ9BY44 585 aaKnown RBP7.84□□□□□ -1.15
CASP4-204ENST00000524843 ROPN1BQ9BZX4 212 aaPredicted RBP7.84□□□□□ -1.15
CASP4-204ENST00000524843 TRIM31Q9BZY9 425 aa7.84□□□□□ -1.15
CASP4-204ENST00000524843 NXF3Q9H4D5 531 aaKnown RBP7.84□□□□□ -1.15
CASP4-204ENST00000524843 RSAD1Q9HA92 442 aa7.84□□□□□ -1.15
CASP4-204ENST00000524843 ROPN1Q9HAT0 212 aaPredicted RBP7.84□□□□□ -1.15
CASP4-204ENST00000524843 CHST7Q9NS84 486 aa7.84□□□□□ -1.15
CASP4-204ENST00000524843 CALCOCO1Q9P1Z2 691 aa7.84□□□□□ -1.15
CASP4-204ENST00000524843 HMGXB4Q9UGU5 601 aa7.84□□□□□ -1.15
CASP4-204ENST00000524843 GTF2IRD1Q9UHL9 959 aa7.84□□□□□ -1.15
CASP4-204ENST00000524843 SHOC2Q9UQ13 582 aa7.84□□□□□ -1.15
CASP4-204ENST00000524843 SNX9Q9Y5X1 595 aa7.84□□□□□ -1.15
CASP4-204ENST00000524843 NFS1Q9Y697 457 aa7.84□□□□□ -1.15
CASP4-204ENST00000524843 SQORQ9Y6N5 450 aa7.84□□□□□ -1.15
CASP4-204ENST00000524843 THSD7BQ9C0I4 1608 aa7.84□□□□□ -1.15
CASP4-204ENST00000524843 CFAP69A5D8W1 941 aa7.83□□□□□ -1.16
CASP4-204ENST00000524843 C2CD4BA6NLJ0 364 aa7.83□□□□□ -1.16
CASP4-204ENST00000524843 GOLGA8SH3BPF8 625 aa7.83□□□□□ -1.16
CASP4-204ENST00000524843 APOC4-APOC2K7ER74 178 aa7.83□□□□□ -1.16
CASP4-204ENST00000524843 MDM4O15151 490 aa7.83□□□□□ -1.16
CASP4-204ENST00000524843 TREHO43280 583 aa7.83□□□□□ -1.16
CASP4-204ENST00000524843 HUS1O60921 280 aa7.83□□□□□ -1.16
CASP4-204ENST00000524843 CABYRO75952 493 aa7.83□□□□□ -1.16
CASP4-204ENST00000524843 TOMM70O94826 608 aa7.83□□□□□ -1.16
CASP4-204ENST00000524843 AGTP01019 485 aa7.83□□□□□ -1.16
CASP4-204ENST00000524843 APOC2P02655 101 aa7.83□□□□□ -1.16
CASP4-204ENST00000524843 C6orf222P0C671 652 aaPredicted RBP7.83□□□□□ -1.16
CASP4-204ENST00000524843 SKIP12755 728 aa7.83□□□□□ -1.16
CASP4-204ENST00000524843 SDC4P31431 198 aa7.83□□□□□ -1.16
CASP4-204ENST00000524843 PTPN9P43378 593 aa7.83□□□□□ -1.16
CASP4-204ENST00000524843 CDH8P55286 799 aa7.83□□□□□ -1.16
CASP4-204ENST00000524843 SLC8A3P57103 927 aa7.83□□□□□ -1.16
CASP4-204ENST00000524843 OGDHQ02218 1023 aa7.83□□□□□ -1.16
CASP4-204ENST00000524843 BYSLQ13895 437 aaKnown RBP7.83□□□□□ -1.16
CASP4-204ENST00000524843 MORF4L2Q15014 288 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms