RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 VRTNQ9H8Y1 702 aa19.95■□□□□ 0.78
SPIDR-220ENST00000522900 LMAN1LQ9HAT1 526 aa19.95■□□□□ 0.78
SPIDR-220ENST00000522900 GKN1Q9NS71 199 aa19.95■□□□□ 0.78
SPIDR-220ENST00000522900 TMEM30AQ9NV96 361 aa19.95■□□□□ 0.78
SPIDR-220ENST00000522900 COL4A2P08572 1712 aa19.95■□□□□ 0.78
SPIDR-220ENST00000522900 VPS13AQ96RL7 3174 aa19.95■□□□□ 0.78
SPIDR-220ENST00000522900 A8MXQ7 604 aa19.94■□□□□ 0.78
SPIDR-220ENST00000522900 CLDN5O00501 218 aa19.94■□□□□ 0.78
SPIDR-220ENST00000522900 LAMTOR5O43504 91 aa19.94■□□□□ 0.78
SPIDR-220ENST00000522900 AKAP3O75969 853 aa19.94■□□□□ 0.78
SPIDR-220ENST00000522900 DDX6P26196 483 aaKnown RBP eCLIP19.94■□□□□ 0.78
SPIDR-220ENST00000522900 MTAPQ13126 283 aa19.94■□□□□ 0.78
SPIDR-220ENST00000522900 PNOCQ13519 176 aa19.94■□□□□ 0.78
SPIDR-220ENST00000522900 ZNF699Q32M78 642 aa19.94■□□□□ 0.78
SPIDR-220ENST00000522900 ZACNQ401N2 412 aa19.94■□□□□ 0.78
SPIDR-220ENST00000522900 WDR44Q5JSH3 913 aa19.94■□□□□ 0.78
SPIDR-220ENST00000522900 VSTM1Q6UX27 236 aa19.94■□□□□ 0.78
SPIDR-220ENST00000522900 SCARA5Q6ZMJ2 495 aa19.94■□□□□ 0.78
SPIDR-220ENST00000522900 SV2AQ7L0J3 742 aa19.94■□□□□ 0.78
SPIDR-220ENST00000522900 SMYD4Q8IYR2 804 aaPredicted RBP19.94■□□□□ 0.78
SPIDR-220ENST00000522900 GUF1Q8N442 669 aaKnown RBP19.94■□□□□ 0.78
SPIDR-220ENST00000522900 NKD2Q969F2 451 aaPredicted RBP19.94■□□□□ 0.78
SPIDR-220ENST00000522900 SPATA17Q96L03 361 aa19.94■□□□□ 0.78
SPIDR-220ENST00000522900 B3GNT5Q9BYG0 378 aa19.94■□□□□ 0.78
SPIDR-220ENST00000522900 TDP1Q9NUW8 608 aa19.94■□□□□ 0.78
SPIDR-220ENST00000522900 UXTQ9UBK9 157 aaPredicted RBP19.94■□□□□ 0.78
SPIDR-220ENST00000522900 FRMD4BQ9Y2L6 1034 aa19.94■□□□□ 0.78
SPIDR-220ENST00000522900 C2orf78A6NCI8 922 aa19.93■□□□□ 0.78
SPIDR-220ENST00000522900 F8VP50 259 aa19.93■□□□□ 0.78
SPIDR-220ENST00000522900 SPECC1L-ADORA2AF8WAN1 911 aa19.93■□□□□ 0.78
SPIDR-220ENST00000522900 KIF20AO95235 890 aa19.93■□□□□ 0.78
SPIDR-220ENST00000522900 CHRNB1P11230 501 aa19.93■□□□□ 0.78
SPIDR-220ENST00000522900 NR2F2P24468 414 aa19.93■□□□□ 0.78
SPIDR-220ENST00000522900 MAGEA9P43362 315 aa19.93■□□□□ 0.78
SPIDR-220ENST00000522900 VAMP7P51809 220 aa19.93■□□□□ 0.78
SPIDR-220ENST00000522900 MLLT6P55198 1093 aaPredicted RBP19.93■□□□□ 0.78
SPIDR-220ENST00000522900 NUCB2P80303 420 aa19.93■□□□□ 0.78
SPIDR-220ENST00000522900 CSTF1Q05048 431 aaKnown RBP19.93■□□□□ 0.78
SPIDR-220ENST00000522900 ZNF667Q5HYK9 610 aa19.93■□□□□ 0.78
SPIDR-220ENST00000522900 ENGASEQ8NFI3 743 aa19.93■□□□□ 0.78
SPIDR-220ENST00000522900 ZNF518BQ9C0D4 1074 aa19.93■□□□□ 0.78
SPIDR-220ENST00000522900 TRPC7Q9HCX4 862 aa19.93■□□□□ 0.78
SPIDR-220ENST00000522900 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.93■□□□□ 0.782e-6■■■■■ 149.1
SPIDR-220ENST00000522900 THG1LQ9NWX6 298 aaKnown RBP19.93■□□□□ 0.78
SPIDR-220ENST00000522900 ZMYM5Q9UJ78 669 aa19.93■□□□□ 0.78
SPIDR-220ENST00000522900 TICRRQ7Z2Z1 1910 aa19.92■□□□□ 0.78
SPIDR-220ENST00000522900 SOBPA7XYQ1 873 aa19.92■□□□□ 0.78
SPIDR-220ENST00000522900 CLSTN1O94985 981 aa19.92■□□□□ 0.78
SPIDR-220ENST00000522900 CTHP32929 405 aa19.92■□□□□ 0.78
SPIDR-220ENST00000522900 NFIL3Q16649 462 aa19.92■□□□□ 0.78
SPIDR-220ENST00000522900 SGSM1Q2NKQ1 1148 aa19.92■□□□□ 0.78
SPIDR-220ENST00000522900 TRIM68Q6AZZ1 485 aa19.92■□□□□ 0.78
SPIDR-220ENST00000522900 SPOPLQ6IQ16 392 aa19.92■□□□□ 0.78
SPIDR-220ENST00000522900 TSSK4Q6SA08 328 aa19.92■□□□□ 0.78
SPIDR-220ENST00000522900 ARL14EPQ8N8R7 260 aaPredicted RBP19.92■□□□□ 0.78
SPIDR-220ENST00000522900 B3GALNT2Q8NCR0 500 aa19.92■□□□□ 0.78
SPIDR-220ENST00000522900 ERCC4Q92889 916 aaPredicted RBP19.92■□□□□ 0.78
SPIDR-220ENST00000522900 EEF2KMTQ96G04 330 aa19.92■□□□□ 0.78
SPIDR-220ENST00000522900 FAM83CQ9BQN1 747 aa19.92■□□□□ 0.78
SPIDR-220ENST00000522900 C8orf33Q9H7E9 229 aaPredicted RBP19.92■□□□□ 0.78
SPIDR-220ENST00000522900 RBM12Q9NTZ6 932 aaKnown RBP19.92■□□□□ 0.78
SPIDR-220ENST00000522900 OTOL1A6NHN0 477 aaPredicted RBP19.91■□□□□ 0.78
SPIDR-220ENST00000522900 IKBKBO14920 756 aa19.91■□□□□ 0.78
SPIDR-220ENST00000522900 TRIM49P0CI25 452 aa19.91■□□□□ 0.78
SPIDR-220ENST00000522900 TRIM49CP0CI26 452 aa19.91■□□□□ 0.78
SPIDR-220ENST00000522900 PLCB2Q00722 1185 aa19.91■□□□□ 0.78
SPIDR-220ENST00000522900 PPP3CAQ08209 521 aa19.91■□□□□ 0.78
SPIDR-220ENST00000522900 GAS6Q14393 721 aa19.91■□□□□ 0.78
SPIDR-220ENST00000522900 ZCWPW2Q504Y3 356 aa19.91■□□□□ 0.78
SPIDR-220ENST00000522900 DENND5BQ6ZUT9 1274 aa19.91■□□□□ 0.78
SPIDR-220ENST00000522900 C8orf48Q96LL4 319 aa19.91■□□□□ 0.78
SPIDR-220ENST00000522900 CHRDQ9H2X0 955 aa19.91■□□□□ 0.78
SPIDR-220ENST00000522900 EBF3Q9H4W6 596 aa19.91■□□□□ 0.78
SPIDR-220ENST00000522900 HPS4Q9NQG7 708 aa19.91■□□□□ 0.78
SPIDR-220ENST00000522900 GCNT4Q9P109 453 aa19.91■□□□□ 0.78
SPIDR-220ENST00000522900 FBXO4Q9UKT5 387 aa19.91■□□□□ 0.78
SPIDR-220ENST00000522900 TRIM66O15016 1216 aa19.9■□□□□ 0.78
SPIDR-220ENST00000522900 MAPK13O15264 365 aa19.9■□□□□ 0.78
SPIDR-220ENST00000522900 HLA-DRAP01903 254 aa19.9■□□□□ 0.78
SPIDR-220ENST00000522900 ARSAP15289 507 aa19.9■□□□□ 0.78
SPIDR-220ENST00000522900 ANXA13P27216 316 aa19.9■□□□□ 0.78
SPIDR-220ENST00000522900 GCLMP48507 274 aa19.9■□□□□ 0.78
SPIDR-220ENST00000522900 ORC1Q13415 861 aa19.9■□□□□ 0.78
SPIDR-220ENST00000522900 ADAM9Q13443 819 aa19.9■□□□□ 0.78
SPIDR-220ENST00000522900 ITPRIPL2Q3MIP1 535 aa19.9■□□□□ 0.78
SPIDR-220ENST00000522900 PAQR9Q6ZVX9 377 aa19.9■□□□□ 0.78
SPIDR-220ENST00000522900 RALGPS2Q86X27 583 aaPredicted RBP19.9■□□□□ 0.78
SPIDR-220ENST00000522900 FAM186BQ8IYM0 893 aa19.9■□□□□ 0.78
SPIDR-220ENST00000522900 TTC16Q8NEE8 873 aa19.9■□□□□ 0.78
SPIDR-220ENST00000522900 KCNK16Q96T55 309 aa19.9■□□□□ 0.78
SPIDR-220ENST00000522900 MIA3Q5JRA6 1907 aa19.9■□□□□ 0.78
SPIDR-220ENST00000522900 TRAV19A0A0A6YYK7 116 aa19.89■□□□□ 0.77
SPIDR-220ENST00000522900 GOLGA6L4A6NEF3 574 aa19.89■□□□□ 0.77
SPIDR-220ENST00000522900 ASS1P00966 412 aaKnown RBP19.89■□□□□ 0.77
SPIDR-220ENST00000522900 USP17L7P0C7H9 530 aa19.89■□□□□ 0.77
SPIDR-220ENST00000522900 HDCP19113 662 aa19.89■□□□□ 0.77
SPIDR-220ENST00000522900 RPL13P26373 211 aaKnown RBP19.89■□□□□ 0.77
SPIDR-220ENST00000522900 PSMC2P35998 433 aaKnown RBP19.89■□□□□ 0.77
SPIDR-220ENST00000522900 PRCPP42785 496 aa19.89■□□□□ 0.77
SPIDR-220ENST00000522900 NOP14P78316 857 aaKnown RBP19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms