RNA–Protein interactions for RNA: ENST00000522792.1

CTNNA1-236, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-236ENST00000522792 CES2O00748 559 aa16.29■□□□□ 0.2
CTNNA1-236ENST00000522792 GABBR2O75899 941 aa16.29■□□□□ 0.2
CTNNA1-236ENST00000522792 CTNNA1P35221 906 aaKnown RBP16.29■□□□□ 0.2
CTNNA1-236ENST00000522792 SSR1P43307 286 aaKnown RBP16.29■□□□□ 0.2
CTNNA1-236ENST00000522792 BCAR1P56945 870 aa16.29■□□□□ 0.2
CTNNA1-236ENST00000522792 TAP1Q03518 808 aa16.29■□□□□ 0.2
CTNNA1-236ENST00000522792 FAM102AQ5T9C2 384 aaPredicted RBP16.29■□□□□ 0.2
CTNNA1-236ENST00000522792 AADACL2Q6P093 401 aa16.29■□□□□ 0.2
CTNNA1-236ENST00000522792 NPAS4Q8IUM7 802 aa16.29■□□□□ 0.2
CTNNA1-236ENST00000522792 CRIPAKQ8N1N5 446 aa16.29■□□□□ 0.2
CTNNA1-236ENST00000522792 SPATA4Q8NEY3 305 aa16.29■□□□□ 0.2
CTNNA1-236ENST00000522792 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.29■□□□□ 0.2
CTNNA1-236ENST00000522792 MCRS1Q96EZ8 462 aa16.29■□□□□ 0.2
CTNNA1-236ENST00000522792 PIWIL1Q96J94 861 aaKnown RBP16.29■□□□□ 0.2
CTNNA1-236ENST00000522792 HNRNPABQ99729 332 aaKnown RBP16.29■□□□□ 0.2
CTNNA1-236ENST00000522792 CDH9Q9ULB4 789 aa16.29■□□□□ 0.2
CTNNA1-236ENST00000522792 TRIM43BA6NCK2 446 aa16.28■□□□□ 0.2
CTNNA1-236ENST00000522792 SIGLEC16A6NMB1 481 aa16.28■□□□□ 0.2
CTNNA1-236ENST00000522792 CYP11A1P05108 521 aa16.28■□□□□ 0.2
CTNNA1-236ENST00000522792 CTNNA2P26232 953 aa16.28■□□□□ 0.2
CTNNA1-236ENST00000522792 SLC1A1P43005 524 aa16.28■□□□□ 0.2
CTNNA1-236ENST00000522792 PEX5P50542 639 aa16.28■□□□□ 0.2
CTNNA1-236ENST00000522792 GSCP56915 257 aaPredicted RBP16.28■□□□□ 0.2
CTNNA1-236ENST00000522792 IKBKEQ14164 716 aa16.28■□□□□ 0.2
CTNNA1-236ENST00000522792 CNKSR3Q6P9H4 555 aa16.28■□□□□ 0.2
CTNNA1-236ENST00000522792 PAQR9Q6ZVX9 377 aa16.28■□□□□ 0.2
CTNNA1-236ENST00000522792 ZNF572Q7Z3I7 529 aaPredicted RBP16.28■□□□□ 0.2
CTNNA1-236ENST00000522792 TRIM43Q96BQ3 446 aaPredicted RBP16.28■□□□□ 0.2
CTNNA1-236ENST00000522792 SLC4A5Q9BY07 1137 aa16.28■□□□□ 0.2
CTNNA1-236ENST00000522792 B3GNT5Q9BYG0 378 aa16.28■□□□□ 0.2
CTNNA1-236ENST00000522792 MIS12Q9H081 205 aa16.28■□□□□ 0.2
CTNNA1-236ENST00000522792 RNF14Q9UBS8 474 aa16.28■□□□□ 0.2
CTNNA1-236ENST00000522792 PCDHA3Q9Y5H8 950 aa16.28■□□□□ 0.2
CTNNA1-236ENST00000522792 CCDC66A2RUB6 948 aa16.28■□□□□ 0.2
CTNNA1-236ENST00000522792 RHOXF2BP0C7M4 288 aa16.28■□□□□ 0.2
CTNNA1-236ENST00000522792 PCSK1P29120 753 aa16.28■□□□□ 0.2
CTNNA1-236ENST00000522792 GJC1P36383 396 aa16.28■□□□□ 0.2
CTNNA1-236ENST00000522792 TAS2R40P59535 323 aa16.28■□□□□ 0.2
CTNNA1-236ENST00000522792 OVOS1Q6IE37 1185 aa16.28■□□□□ 0.2
CTNNA1-236ENST00000522792 SCUBE3Q8IX30 993 aa16.28■□□□□ 0.2
CTNNA1-236ENST00000522792 PCED1BQ96HM7 432 aa16.28■□□□□ 0.2
CTNNA1-236ENST00000522792 RPGRIP1Q96KN7 1286 aa16.28■□□□□ 0.2
CTNNA1-236ENST00000522792 RNPC3Q96LT9 517 aaKnown RBP16.28■□□□□ 0.2
CTNNA1-236ENST00000522792 TMEM209Q96SK2 561 aa16.28■□□□□ 0.2
CTNNA1-236ENST00000522792 RHOXF2Q9BQY4 288 aa16.28■□□□□ 0.2
CTNNA1-236ENST00000522792 CARD9Q9H257 536 aa16.28■□□□□ 0.2
CTNNA1-236ENST00000522792 KRT82Q9NSB4 513 aa16.28■□□□□ 0.2
CTNNA1-236ENST00000522792 RBM12Q9NTZ6 932 aaKnown RBP16.28■□□□□ 0.2
CTNNA1-236ENST00000522792 DSEQ9UL01 958 aa16.28■□□□□ 0.2
CTNNA1-236ENST00000522792 PCDHB8Q9UN66 801 aa16.28■□□□□ 0.2
CTNNA1-236ENST00000522792 F8VP50 259 aa16.27■□□□□ 0.2
CTNNA1-236ENST00000522792 PGRMC1O00264 195 aaKnown RBP16.27■□□□□ 0.2
CTNNA1-236ENST00000522792 NRP1O14786 923 aa16.27■□□□□ 0.2
CTNNA1-236ENST00000522792 HOXA2O43364 376 aa16.27■□□□□ 0.2
CTNNA1-236ENST00000522792 TADA2AO75478 443 aa16.27■□□□□ 0.2
CTNNA1-236ENST00000522792 GRAP2O75791 330 aa16.27■□□□□ 0.2
CTNNA1-236ENST00000522792 BEST1O76090 585 aa16.27■□□□□ 0.2
CTNNA1-236ENST00000522792 LCP1P13796 627 aa16.27■□□□□ 0.2
CTNNA1-236ENST00000522792 CSF2RAP15509 400 aa16.27■□□□□ 0.2
CTNNA1-236ENST00000522792 PAX3P23760 479 aa16.27■□□□□ 0.2
CTNNA1-236ENST00000522792 PSMA2P25787 234 aa16.27■□□□□ 0.2
CTNNA1-236ENST00000522792 PBX3P40426 434 aa16.27■□□□□ 0.2
CTNNA1-236ENST00000522792 RABGGTBP53611 331 aa16.27■□□□□ 0.2
CTNNA1-236ENST00000522792 TTC3P53804 2025 aa16.27■□□□□ 0.2
CTNNA1-236ENST00000522792 MICAL3Q7RTP6 2002 aa16.27■□□□□ 0.2
CTNNA1-236ENST00000522792 RASGEF1CQ8N431 466 aa16.27■□□□□ 0.2
CTNNA1-236ENST00000522792 OR10T2Q8NGX3 314 aa16.27■□□□□ 0.2
CTNNA1-236ENST00000522792 ACTRT1Q8TDG2 376 aa16.27■□□□□ 0.2
CTNNA1-236ENST00000522792 DUSP16Q9BY84 665 aa16.27■□□□□ 0.2
CTNNA1-236ENST00000522792 TMEM189-UBE2V1I3L0A0 370 aa16.26■□□□□ 0.19
CTNNA1-236ENST00000522792 PAPSS1O43252 624 aaPredicted RBP16.26■□□□□ 0.19
CTNNA1-236ENST00000522792 TIMP1P01033 207 aa16.26■□□□□ 0.19
CTNNA1-236ENST00000522792 TCF4P15884 667 aa16.26■□□□□ 0.19
CTNNA1-236ENST00000522792 SLC11A1P49279 550 aa16.26■□□□□ 0.19
CTNNA1-236ENST00000522792 TAF5Q15542 800 aa16.26■□□□□ 0.19
CTNNA1-236ENST00000522792 TMEM110Q86TL2 294 aa16.26■□□□□ 0.19
CTNNA1-236ENST00000522792 FAM35AQ86V20 835 aa16.26■□□□□ 0.19
CTNNA1-236ENST00000522792 MYCBPAPQ8TBZ2 947 aa16.26■□□□□ 0.19
CTNNA1-236ENST00000522792 CLEC4CQ8WTT0 213 aa16.26■□□□□ 0.19
CTNNA1-236ENST00000522792 STK32AQ8WU08 396 aa16.26■□□□□ 0.19
CTNNA1-236ENST00000522792 MYLPFQ96A32 169 aa16.26■□□□□ 0.19
CTNNA1-236ENST00000522792 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.26■□□□□ 0.191e-6■■□□□ 13.4
CTNNA1-236ENST00000522792 AP1M1Q9BXS5 423 aa16.26■□□□□ 0.19
CTNNA1-236ENST00000522792 RHOBTB2Q9BYZ6 727 aa16.26■□□□□ 0.19
CTNNA1-236ENST00000522792 MKI67P46013 3256 aaKnown RBP16.26■□□□□ 0.19
CTNNA1-236ENST00000522792 NT5C1B-RDH14C9J2C7 533 aa16.26■□□□□ 0.19
CTNNA1-236ENST00000522792 XPO1O14980 1071 aaKnown RBP16.26■□□□□ 0.19
CTNNA1-236ENST00000522792 FGGP02679 453 aa16.26■□□□□ 0.19
CTNNA1-236ENST00000522792 FAM200BP0CF97 657 aa16.26■□□□□ 0.19
CTNNA1-236ENST00000522792 PYGMP11217 842 aa16.26■□□□□ 0.19
CTNNA1-236ENST00000522792 RAG1P15918 1043 aa16.26■□□□□ 0.19
CTNNA1-236ENST00000522792 NPR3P17342 541 aa16.26■□□□□ 0.19
CTNNA1-236ENST00000522792 MAN1A1P33908 653 aa16.26■□□□□ 0.19
CTNNA1-236ENST00000522792 RFC2P35250 354 aa16.26■□□□□ 0.19
CTNNA1-236ENST00000522792 RWDD2BP57060 319 aa16.26■□□□□ 0.19
CTNNA1-236ENST00000522792 MAP3K7CLP57077 242 aa16.26■□□□□ 0.19
CTNNA1-236ENST00000522792 YWHAHQ04917 246 aaPredicted RBP16.26■□□□□ 0.19
CTNNA1-236ENST00000522792 INTS6LQ5JSJ4 861 aaKnown RBP16.26■□□□□ 0.19
CTNNA1-236ENST00000522792 CC2D1AQ6P1N0 951 aaPredicted RBP16.26■□□□□ 0.19
CTNNA1-236ENST00000522792 OLFML1Q6UWY5 402 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms