RNA–Protein interactions for RNA: ENST00000521646.1

CSMD1-210, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 1,003 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-210ENST00000521646 HNRNPDLO14979 420 aaKnown RBP11.97□□□□□ -0.49
CSMD1-210ENST00000521646 EGFP01133 1207 aa11.97□□□□□ -0.49
CSMD1-210ENST00000521646 RAP1GAPP47736 663 aa11.97□□□□□ -0.49
CSMD1-210ENST00000521646 LIG4P49917 911 aa11.97□□□□□ -0.49
CSMD1-210ENST00000521646 EPHB3P54753 998 aa11.97□□□□□ -0.49
CSMD1-210ENST00000521646 NRLP54845 237 aa11.97□□□□□ -0.49
CSMD1-210ENST00000521646 ZXDBP98169 803 aa11.97□□□□□ -0.49
CSMD1-210ENST00000521646 KARSQ15046 597 aaKnown RBP11.97□□□□□ -0.49
CSMD1-210ENST00000521646 TMEM196Q5HYL7 178 aa11.97□□□□□ -0.49
CSMD1-210ENST00000521646 TXNDC8Q6A555 127 aa11.97□□□□□ -0.49
CSMD1-210ENST00000521646 WDR5BQ86VZ2 330 aa11.97□□□□□ -0.49
CSMD1-210ENST00000521646 RALGPS2Q86X27 583 aaPredicted RBP11.97□□□□□ -0.49
CSMD1-210ENST00000521646 FAM184AQ8NB25 1140 aa11.97□□□□□ -0.49
CSMD1-210ENST00000521646 NETO1Q8TDF5 533 aa11.97□□□□□ -0.49
CSMD1-210ENST00000521646 BPIFB1Q8TDL5 484 aa11.97□□□□□ -0.49
CSMD1-210ENST00000521646 CSGALNACT1Q8TDX6 532 aa11.97□□□□□ -0.49
CSMD1-210ENST00000521646 BICD1Q96G01 975 aa11.97□□□□□ -0.49
CSMD1-210ENST00000521646 PKMYT1Q99640 499 aa11.97□□□□□ -0.49
CSMD1-210ENST00000521646 IER2Q9BTL4 223 aa11.97□□□□□ -0.49
CSMD1-210ENST00000521646 TIPINQ9BVW5 301 aa11.97□□□□□ -0.49
CSMD1-210ENST00000521646 EBF3Q9H4W6 596 aa11.97□□□□□ -0.49
CSMD1-210ENST00000521646 TASP1Q9H6P5 420 aa11.97□□□□□ -0.49
CSMD1-210ENST00000521646 C8orf33Q9H7E9 229 aaPredicted RBP11.97□□□□□ -0.49
CSMD1-210ENST00000521646 GKN1Q9NS71 199 aa11.97□□□□□ -0.49
CSMD1-210ENST00000521646 ANAPC1Q9H1A4 1944 aa11.97□□□□□ -0.49
CSMD1-210ENST00000521646 FREM2Q5SZK8 3169 aa11.96□□□□□ -0.49
CSMD1-210ENST00000521646 ZFYVE26Q68DK2 2539 aa11.96□□□□□ -0.49
CSMD1-210ENST00000521646 DMXL2Q8TDJ6 3036 aa11.96□□□□□ -0.49
CSMD1-210ENST00000521646 DCLK1O15075 740 aa11.96□□□□□ -0.49
CSMD1-210ENST00000521646 HAPLN1P10915 354 aaPredicted RBP11.96□□□□□ -0.49
CSMD1-210ENST00000521646 PLCG1P19174 1290 aa11.96□□□□□ -0.49
CSMD1-210ENST00000521646 WEE1P30291 646 aa11.96□□□□□ -0.49
CSMD1-210ENST00000521646 HOXA6P31267 233 aa11.96□□□□□ -0.49
CSMD1-210ENST00000521646 MATR3P43243 847 aaKnown RBP eCLIP11.96□□□□□ -0.49
CSMD1-210ENST00000521646 ALDH1A3P47895 512 aa11.96□□□□□ -0.49
CSMD1-210ENST00000521646 NLRP12P59046 1061 aa11.96□□□□□ -0.49
CSMD1-210ENST00000521646 PTSQ03393 145 aa11.96□□□□□ -0.49
CSMD1-210ENST00000521646 MESP2Q0VG99 397 aa11.96□□□□□ -0.49
CSMD1-210ENST00000521646 MGAT5BQ3V5L5 792 aa11.96□□□□□ -0.49
CSMD1-210ENST00000521646 ARHGAP29Q52LW3 1261 aa11.96□□□□□ -0.49
CSMD1-210ENST00000521646 N4BP2L1Q5TBK1 243 aaPredicted RBP11.96□□□□□ -0.49
CSMD1-210ENST00000521646 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.96□□□□□ -0.49
CSMD1-210ENST00000521646 USP37Q86T82 979 aa11.96□□□□□ -0.49
CSMD1-210ENST00000521646 OSTM1Q86WC4 334 aa11.96□□□□□ -0.49
CSMD1-210ENST00000521646 SFTPA1Q8IWL2 248 aa11.96□□□□□ -0.49
CSMD1-210ENST00000521646 YAF2Q8IY57 180 aa11.96□□□□□ -0.49
CSMD1-210ENST00000521646 ZSCAN31Q96LW9 406 aaPredicted RBP11.96□□□□□ -0.49
CSMD1-210ENST00000521646 MSTO1Q9BUK6 570 aa11.96□□□□□ -0.49
CSMD1-210ENST00000521646 STRA6Q9BX79 667 aa11.96□□□□□ -0.49
CSMD1-210ENST00000521646 GPR88Q9GZN0 384 aa11.96□□□□□ -0.49
CSMD1-210ENST00000521646 ARRDC1-AS1Q9H2J1 176 aa11.96□□□□□ -0.49
CSMD1-210ENST00000521646 RPF1Q9H9Y2 349 aaKnown RBP11.96□□□□□ -0.49
CSMD1-210ENST00000521646 SH2B1Q9NRF2 756 aaPredicted RBP11.96□□□□□ -0.49
CSMD1-210ENST00000521646 OBP2AQ9NY56 170 aa11.96□□□□□ -0.49
CSMD1-210ENST00000521646 STYXL1Q9Y6J8 313 aa11.96□□□□□ -0.49
CSMD1-210ENST00000521646 LAMA5O15230 3695 aa11.96□□□□□ -0.5
CSMD1-210ENST00000521646 PTPRDP23468 1912 aa11.96□□□□□ -0.5
CSMD1-210ENST00000521646 ABCA7Q8IZY2 2146 aa11.95□□□□□ -0.5
CSMD1-210ENST00000521646 CYB561D2O14569 222 aa11.95□□□□□ -0.5
CSMD1-210ENST00000521646 LRP3O75074 770 aa11.95□□□□□ -0.5
CSMD1-210ENST00000521646 ODC1P11926 461 aa11.95□□□□□ -0.5
CSMD1-210ENST00000521646 PMLP29590 882 aa11.95□□□□□ -0.5
CSMD1-210ENST00000521646 CASP5P51878 434 aa11.95□□□□□ -0.5
CSMD1-210ENST00000521646 SMTNP53814 917 aa11.95□□□□□ -0.5
CSMD1-210ENST00000521646 GTF2BQ00403 316 aa11.95□□□□□ -0.5
CSMD1-210ENST00000521646 TMEM132DQ14C87 1099 aa11.95□□□□□ -0.5
CSMD1-210ENST00000521646 GAB4Q2WGN9 574 aa11.95□□□□□ -0.5
CSMD1-210ENST00000521646 MCTP1Q6DN14 999 aa11.95□□□□□ -0.5
CSMD1-210ENST00000521646 CMTM8Q8IZV2 173 aa11.95□□□□□ -0.5
CSMD1-210ENST00000521646 MYCT1Q8N699 235 aa11.95□□□□□ -0.5
CSMD1-210ENST00000521646 MAB21L3Q8N8X9 362 aa11.95□□□□□ -0.5
CSMD1-210ENST00000521646 SECISBP2LQ93073 1101 aaKnown RBP11.95□□□□□ -0.5
CSMD1-210ENST00000521646 E2F7Q96AV8 911 aa11.95□□□□□ -0.5
CSMD1-210ENST00000521646 HHIPQ96QV1 700 aa11.95□□□□□ -0.5
CSMD1-210ENST00000521646 CYP2S1Q96SQ9 504 aa11.95□□□□□ -0.5
CSMD1-210ENST00000521646 PYM1Q9BRP8 204 aaKnown RBP11.95□□□□□ -0.5
CSMD1-210ENST00000521646 RAB34Q9BZG1 259 aa11.95□□□□□ -0.5
CSMD1-210ENST00000521646 PPP4R2Q9NY27 417 aa11.95□□□□□ -0.5
CSMD1-210ENST00000521646 ABI2Q9NYB9 513 aaPredicted RBP11.95□□□□□ -0.5
CSMD1-210ENST00000521646 ASB3Q9Y575 518 aa11.95□□□□□ -0.5
CSMD1-210ENST00000521646 NME7Q9Y5B8 376 aa11.95□□□□□ -0.5
CSMD1-210ENST00000521646 ZNF638Q14966 1978 aaKnown RBP11.94□□□□□ -0.5
CSMD1-210ENST00000521646 PTPRJQ12913 1337 aa11.94□□□□□ -0.5
CSMD1-210ENST00000521646 TRDMT1O14717 391 aaKnown RBP11.94□□□□□ -0.5
CSMD1-210ENST00000521646 TRAK2O60296 914 aa11.94□□□□□ -0.5
CSMD1-210ENST00000521646 EPN2O95208 641 aa11.94□□□□□ -0.5
CSMD1-210ENST00000521646 HNRNPLP14866 589 aaKnown RBP eCLIP11.94□□□□□ -0.5
CSMD1-210ENST00000521646 ACAT1P24752 427 aaKnown RBP11.94□□□□□ -0.5
CSMD1-210ENST00000521646 GJB2P29033 226 aa11.94□□□□□ -0.5
CSMD1-210ENST00000521646 MCM2P49736 904 aa11.94□□□□□ -0.5
CSMD1-210ENST00000521646 GALK1P51570 392 aa11.94□□□□□ -0.5
CSMD1-210ENST00000521646 LRRC32Q14392 662 aa11.94□□□□□ -0.5
CSMD1-210ENST00000521646 ST3GAL2Q16842 350 aa11.94□□□□□ -0.5
CSMD1-210ENST00000521646 ITPRIPL2Q3MIP1 535 aa11.94□□□□□ -0.5
CSMD1-210ENST00000521646 RILPL1Q5EBL4 403 aa11.94□□□□□ -0.5
CSMD1-210ENST00000521646 DGKKQ5KSL6 1271 aa11.94□□□□□ -0.5
CSMD1-210ENST00000521646 GAB3Q8WWW8 586 aa11.94□□□□□ -0.5
CSMD1-210ENST00000521646 RAD54LQ92698 747 aa11.94□□□□□ -0.5
CSMD1-210ENST00000521646 EPSTI1Q96J88 318 aa11.94□□□□□ -0.5
CSMD1-210ENST00000521646 TMX3Q96JJ7 454 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms