RNA–Protein interactions for RNA: ENST00000521588.3

R3HCC1-207, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 2

Gene R3HCC1, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-207ENST00000521588 ZFYVE19Q96K21 471 aa20.63■□□□□ 0.89
R3HCC1-207ENST00000521588 SPATA17Q96L03 361 aa20.63■□□□□ 0.89
R3HCC1-207ENST00000521588 CEP295NLQ96MC4 621 aa20.63■□□□□ 0.89
R3HCC1-207ENST00000521588 SEMA4AQ9H3S1 761 aa20.63■□□□□ 0.89
R3HCC1-207ENST00000521588 PTPRDP23468 1912 aa20.63■□□□□ 0.89
R3HCC1-207ENST00000521588 LAMTOR5O43504 91 aa20.62■□□□□ 0.89
R3HCC1-207ENST00000521588 PHACTR2O75167 634 aa20.62■□□□□ 0.89
R3HCC1-207ENST00000521588 KIF20AO95235 890 aa20.62■□□□□ 0.89
R3HCC1-207ENST00000521588 VNN1O95497 513 aa20.62■□□□□ 0.89
R3HCC1-207ENST00000521588 PTPN1P18031 435 aaKnown RBP20.62■□□□□ 0.89
R3HCC1-207ENST00000521588 BDNFP23560 247 aa20.62■□□□□ 0.89
R3HCC1-207ENST00000521588 CCNE1P24864 410 aa20.62■□□□□ 0.89
R3HCC1-207ENST00000521588 AVPR1AP37288 418 aa20.62■□□□□ 0.89
R3HCC1-207ENST00000521588 NFIL3Q16649 462 aa20.62■□□□□ 0.89
R3HCC1-207ENST00000521588 C1orf220Q5T0J3 134 aa20.62■□□□□ 0.89
R3HCC1-207ENST00000521588 C1orf228Q6PIY5 440 aa20.62■□□□□ 0.89
R3HCC1-207ENST00000521588 GUF1Q8N442 669 aaKnown RBP20.62■□□□□ 0.89
R3HCC1-207ENST00000521588 FAM83CQ9BQN1 747 aa20.62■□□□□ 0.89
R3HCC1-207ENST00000521588 CHRDQ9H2X0 955 aa20.62■□□□□ 0.89
R3HCC1-207ENST00000521588 LMAN1LQ9HAT1 526 aa20.62■□□□□ 0.89
R3HCC1-207ENST00000521588 TDP1Q9NUW8 608 aa20.62■□□□□ 0.89
R3HCC1-207ENST00000521588 GTSE1Q9NYZ3 720 aa20.62■□□□□ 0.89
R3HCC1-207ENST00000521588 NXF1Q9UBU9 619 aaKnown RBP20.62■□□□□ 0.89
R3HCC1-207ENST00000521588 CCL26Q9Y258 94 aa20.62■□□□□ 0.89
R3HCC1-207ENST00000521588 R4GN57 208 aa20.62■□□□□ 0.89
R3HCC1-207ENST00000521588 FRYLO94915 3013 aa20.62■□□□□ 0.89
R3HCC1-207ENST00000521588 GREB1Q4ZG55 1949 aa20.62■□□□□ 0.89
R3HCC1-207ENST00000521588 IKBKBO14920 756 aa20.61■□□□□ 0.89
R3HCC1-207ENST00000521588 MAPK13O15264 365 aa20.61■□□□□ 0.89
R3HCC1-207ENST00000521588 CALUO43852 315 aaPredicted RBP20.61■□□□□ 0.89
R3HCC1-207ENST00000521588 CHRNB1P11230 501 aa20.61■□□□□ 0.89
R3HCC1-207ENST00000521588 SOX9P48436 509 aa20.61■□□□□ 0.89
R3HCC1-207ENST00000521588 KPNA1P52294 538 aaPredicted RBP20.61■□□□□ 0.89
R3HCC1-207ENST00000521588 CYP27A1Q02318 531 aa20.61■□□□□ 0.89
R3HCC1-207ENST00000521588 MTAPQ13126 283 aa20.61■□□□□ 0.89
R3HCC1-207ENST00000521588 BIRC3Q13489 604 aa20.61■□□□□ 0.89
R3HCC1-207ENST00000521588 NCOA4Q13772 614 aa20.61■□□□□ 0.89
R3HCC1-207ENST00000521588 ZNF268Q14587 947 aaPredicted RBP20.61■□□□□ 0.89
R3HCC1-207ENST00000521588 ZACNQ401N2 412 aa20.61■□□□□ 0.89
R3HCC1-207ENST00000521588 MDH1BQ5I0G3 518 aa20.61■□□□□ 0.89
R3HCC1-207ENST00000521588 RALGPS2Q86X27 583 aaPredicted RBP20.61■□□□□ 0.89
R3HCC1-207ENST00000521588 DPEP3Q9H4B8 488 aa20.61■□□□□ 0.89
R3HCC1-207ENST00000521588 GKN1Q9NS71 199 aa20.61■□□□□ 0.89
R3HCC1-207ENST00000521588 THG1LQ9NWX6 298 aaKnown RBP20.61■□□□□ 0.89
R3HCC1-207ENST00000521588 KIF26AQ9ULI4 1882 aaPredicted RBP20.6■□□□□ 0.89
R3HCC1-207ENST00000521588 OTOGLQ3ZCN5 2332 aa20.6■□□□□ 0.89
R3HCC1-207ENST00000521588 ZNF638Q14966 1978 aaKnown RBP20.6■□□□□ 0.89
R3HCC1-207ENST00000521588 SPECC1L-ADORA2AF8WAN1 911 aa20.6■□□□□ 0.89
R3HCC1-207ENST00000521588 GRIK1P39086 918 aa20.6■□□□□ 0.89
R3HCC1-207ENST00000521588 CDH8P55286 799 aa20.6■□□□□ 0.89
R3HCC1-207ENST00000521588 MCCD1P59942 119 aaPredicted RBP20.6■□□□□ 0.89
R3HCC1-207ENST00000521588 TXNDC11Q6PKC3 985 aa20.6■□□□□ 0.89
R3HCC1-207ENST00000521588 NELL1Q92832 810 aa20.6■□□□□ 0.89
R3HCC1-207ENST00000521588 C8orf48Q96LL4 319 aa20.6■□□□□ 0.89
R3HCC1-207ENST00000521588 KIF9Q9HAQ2 790 aa20.6■□□□□ 0.89
R3HCC1-207ENST00000521588 MAPK8IP1Q9UQF2 711 aa20.6■□□□□ 0.89
R3HCC1-207ENST00000521588 GPR179Q6PRD1 2367 aa20.6■□□□□ 0.89
R3HCC1-207ENST00000521588 ANAPC1Q9H1A4 1944 aa20.59■□□□□ 0.89
R3HCC1-207ENST00000521588 A8MXQ7 604 aa20.59■□□□□ 0.89
R3HCC1-207ENST00000521588 CTHP32929 405 aa20.59■□□□□ 0.89
R3HCC1-207ENST00000521588 USP46P62068 366 aa20.59■□□□□ 0.89
R3HCC1-207ENST00000521588 NUCB2P80303 420 aa20.59■□□□□ 0.89
R3HCC1-207ENST00000521588 CSTF1Q05048 431 aaKnown RBP20.59■□□□□ 0.89
R3HCC1-207ENST00000521588 TNK2Q07912 1038 aa20.59■□□□□ 0.89
R3HCC1-207ENST00000521588 SGSM1Q2NKQ1 1148 aa20.59■□□□□ 0.89
R3HCC1-207ENST00000521588 ZNF699Q32M78 642 aa20.59■□□□□ 0.89
R3HCC1-207ENST00000521588 ZNF667Q5HYK9 610 aa20.59■□□□□ 0.89
R3HCC1-207ENST00000521588 WDR44Q5JSH3 913 aa20.59■□□□□ 0.89
R3HCC1-207ENST00000521588 CEP135Q66GS9 1140 aa20.59■□□□□ 0.89
R3HCC1-207ENST00000521588 DENND5BQ6ZUT9 1274 aa20.59■□□□□ 0.89
R3HCC1-207ENST00000521588 SV2AQ7L0J3 742 aa20.59■□□□□ 0.89
R3HCC1-207ENST00000521588 FMR1NBQ8N0W7 255 aaPredicted RBP20.59■□□□□ 0.89
R3HCC1-207ENST00000521588 TTC8Q8TAM2 541 aa20.59■□□□□ 0.89
R3HCC1-207ENST00000521588 RIN3Q8TB24 985 aa20.59■□□□□ 0.89
R3HCC1-207ENST00000521588 SLC22A12Q96S37 553 aa20.59■□□□□ 0.89
R3HCC1-207ENST00000521588 CYP2S1Q96SQ9 504 aa20.59■□□□□ 0.89
R3HCC1-207ENST00000521588 IER2Q9BTL4 223 aa20.59■□□□□ 0.89
R3HCC1-207ENST00000521588 TTLL2Q9BWV7 592 aa20.59■□□□□ 0.89
R3HCC1-207ENST00000521588 B3GNT5Q9BYG0 378 aa20.59■□□□□ 0.89
R3HCC1-207ENST00000521588 SMYD3Q9H7B4 428 aa20.59■□□□□ 0.89
R3HCC1-207ENST00000521588 PRMT8Q9NR22 394 aaPredicted RBP20.59■□□□□ 0.89
R3HCC1-207ENST00000521588 TMEM30AQ9NV96 361 aa20.59■□□□□ 0.89
R3HCC1-207ENST00000521588 GCNT4Q9P109 453 aa20.59■□□□□ 0.89
R3HCC1-207ENST00000521588 FRMD4BQ9Y2L6 1034 aa20.59■□□□□ 0.89
R3HCC1-207ENST00000521588 TRIM66O15016 1216 aa20.58■□□□□ 0.89
R3HCC1-207ENST00000521588 CACNA2D1P54289 1103 aa20.58■□□□□ 0.89
R3HCC1-207ENST00000521588 NOP14P78316 857 aaKnown RBP20.58■□□□□ 0.89
R3HCC1-207ENST00000521588 ITPRIPL2Q3MIP1 535 aa20.58■□□□□ 0.89
R3HCC1-207ENST00000521588 ZCWPW2Q504Y3 356 aa20.58■□□□□ 0.89
R3HCC1-207ENST00000521588 ZC3H14Q6PJT7 736 aaKnown RBP20.58■□□□□ 0.89
R3HCC1-207ENST00000521588 B3GALNT2Q8NCR0 500 aa20.58■□□□□ 0.89
R3HCC1-207ENST00000521588 ENGASEQ8NFI3 743 aa20.58■□□□□ 0.89
R3HCC1-207ENST00000521588 TAF4BQ92750 862 aa20.58■□□□□ 0.89
R3HCC1-207ENST00000521588 ELMO3Q96BJ8 720 aa20.58■□□□□ 0.89
R3HCC1-207ENST00000521588 SDCBP2Q9H190 292 aa20.58■□□□□ 0.89
R3HCC1-207ENST00000521588 HPS4Q9NQG7 708 aa20.58■□□□□ 0.89
R3HCC1-207ENST00000521588 F8VP50 259 aa20.57■□□□□ 0.88
R3HCC1-207ENST00000521588 AKAP3O75969 853 aa20.57■□□□□ 0.88
R3HCC1-207ENST00000521588 LMNAP02545 664 aaKnown RBP20.57■□□□□ 0.88
R3HCC1-207ENST00000521588 USP17L7P0C7H9 530 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms