RNA–Protein interactions for RNA: ENST00000521569.1

SPARC-204, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 602 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-204ENST00000521569 TNFRSF10BO14763 440 aa9.13□□□□□ -0.95
SPARC-204ENST00000521569 KHNYNO15037 678 aaKnown RBP9.13□□□□□ -0.95
SPARC-204ENST00000521569 OPRD1P41143 372 aa9.13□□□□□ -0.95
SPARC-204ENST00000521569 LMAN2Q12907 356 aa9.13□□□□□ -0.95
SPARC-204ENST00000521569 CRY1Q16526 586 aa9.13□□□□□ -0.95
SPARC-204ENST00000521569 DDR2Q16832 855 aa9.13□□□□□ -0.95
SPARC-204ENST00000521569 SOWAHAQ2M3V2 549 aa9.13□□□□□ -0.95
SPARC-204ENST00000521569 PEAR1Q5VY43 1037 aaPredicted RBP9.13□□□□□ -0.95
SPARC-204ENST00000521569 C4orf50Q6ZRC1 276 aa9.13□□□□□ -0.95
SPARC-204ENST00000521569 OTUB2Q96DC9 234 aa9.13□□□□□ -0.95
SPARC-204ENST00000521569 TMX3Q96JJ7 454 aa9.13□□□□□ -0.95
SPARC-204ENST00000521569 HHIPQ96QV1 700 aa9.13□□□□□ -0.95
SPARC-204ENST00000521569 SLC22A12Q96S37 553 aa9.13□□□□□ -0.95
SPARC-204ENST00000521569 PI4K2AQ9BTU6 479 aa9.13□□□□□ -0.95
SPARC-204ENST00000521569 EDEM2Q9BV94 578 aa9.13□□□□□ -0.95
SPARC-204ENST00000521569 CDH9Q9ULB4 789 aa9.13□□□□□ -0.95
SPARC-204ENST00000521569 MMP17Q9ULZ9 603 aa9.13□□□□□ -0.95
SPARC-204ENST00000521569 AGAP1Q9UPQ3 857 aa9.13□□□□□ -0.95
SPARC-204ENST00000521569 DMXL2Q8TDJ6 3036 aa9.12□□□□□ -0.95
SPARC-204ENST00000521569 GREB1Q4ZG55 1949 aa9.12□□□□□ -0.95
SPARC-204ENST00000521569 ZNF840PA6NDX5 716 aa9.12□□□□□ -0.95
SPARC-204ENST00000521569 C4orf47A7E2U8 309 aa9.12□□□□□ -0.95
SPARC-204ENST00000521569 TISP43B9A030 160 aa9.12□□□□□ -0.95
SPARC-204ENST00000521569 H3BQV1 296 aa9.12□□□□□ -0.95
SPARC-204ENST00000521569 SLC9A3R1O14745 358 aaPredicted RBP9.12□□□□□ -0.95
SPARC-204ENST00000521569 TACC1O75410 805 aa9.12□□□□□ -0.95
SPARC-204ENST00000521569 KRT18P05783 430 aaKnown RBP9.12□□□□□ -0.95
SPARC-204ENST00000521569 HDCP19113 662 aa9.12□□□□□ -0.95
SPARC-204ENST00000521569 GJB2P29033 226 aa9.12□□□□□ -0.95
SPARC-204ENST00000521569 POLR2BP30876 1174 aaKnown RBP9.12□□□□□ -0.95
SPARC-204ENST00000521569 TNFRSF4P43489 277 aa9.12□□□□□ -0.95
SPARC-204ENST00000521569 IFNAR2P48551 515 aa9.12□□□□□ -0.95
SPARC-204ENST00000521569 GPR15P49685 360 aa9.12□□□□□ -0.95
SPARC-204ENST00000521569 ZXDBP98169 803 aa9.12□□□□□ -0.95
SPARC-204ENST00000521569 TFAMQ00059 246 aaKnown RBP9.12□□□□□ -0.95
SPARC-204ENST00000521569 CREB5Q02930 508 aa9.12□□□□□ -0.95
SPARC-204ENST00000521569 MYO1EQ12965 1108 aa9.12□□□□□ -0.95
SPARC-204ENST00000521569 PSMD2Q13200 908 aa9.12□□□□□ -0.95
SPARC-204ENST00000521569 BYSLQ13895 437 aaKnown RBP9.12□□□□□ -0.95
SPARC-204ENST00000521569 SURF1Q15526 300 aa9.12□□□□□ -0.95
SPARC-204ENST00000521569 CCDC6Q16204 474 aa9.12□□□□□ -0.95
SPARC-204ENST00000521569 SNX30Q5VWJ9 437 aa9.12□□□□□ -0.95
SPARC-204ENST00000521569 PSAPL1Q6NUJ1 521 aa9.12□□□□□ -0.95
SPARC-204ENST00000521569 PIP4P1Q86T03 277 aa9.12□□□□□ -0.95
SPARC-204ENST00000521569 SFR1Q86XK3 245 aa9.12□□□□□ -0.95
SPARC-204ENST00000521569 ADGRF2Q8IZF7 708 aa9.12□□□□□ -0.95
SPARC-204ENST00000521569 CSGALNACT2Q8N6G5 542 aa9.12□□□□□ -0.95
SPARC-204ENST00000521569 TSTD1Q8NFU3 115 aa9.12□□□□□ -0.95
SPARC-204ENST00000521569 SH3RF2Q8TEC5 729 aa9.12□□□□□ -0.95
SPARC-204ENST00000521569 KBTBD7Q8WVZ9 684 aa9.12□□□□□ -0.95
SPARC-204ENST00000521569 OVCA2Q8WZ82 227 aa9.12□□□□□ -0.95
SPARC-204ENST00000521569 GATA6Q92908 595 aa9.12□□□□□ -0.95
SPARC-204ENST00000521569 C8orf48Q96LL4 319 aa9.12□□□□□ -0.95
SPARC-204ENST00000521569 CYP2S1Q96SQ9 504 aa9.12□□□□□ -0.95
SPARC-204ENST00000521569 LINC00597Q9H2U6 94 aa9.12□□□□□ -0.95
SPARC-204ENST00000521569 TMEM9BQ9NQ34 198 aa9.12□□□□□ -0.95
SPARC-204ENST00000521569 INTS13Q9NVM9 706 aa9.12□□□□□ -0.95
SPARC-204ENST00000521569 GTF3C4Q9UKN8 822 aa9.12□□□□□ -0.95
SPARC-204ENST00000521569 MAGED2Q9UNF1 606 aaPredicted RBP9.12□□□□□ -0.95
SPARC-204ENST00000521569 SRPRBQ9Y5M8 271 aaKnown RBP9.12□□□□□ -0.95
SPARC-204ENST00000521569 ZFYVE26Q68DK2 2539 aa9.12□□□□□ -0.95
SPARC-204ENST00000521569 LAMA5O15230 3695 aa9.12□□□□□ -0.95
SPARC-204ENST00000521569 SDK1Q7Z5N4 2213 aa9.12□□□□□ -0.95
SPARC-204ENST00000521569 CACNA1GO43497 2377 aa9.12□□□□□ -0.95
SPARC-204ENST00000521569 WDFY3Q8IZQ1 3526 aa9.11□□□□□ -0.95
SPARC-204ENST00000521569 C2orf78A6NCI8 922 aa9.11□□□□□ -0.95
SPARC-204ENST00000521569 MYMKA6NI61 221 aa9.11□□□□□ -0.95
SPARC-204ENST00000521569 TRIM66O15016 1216 aa9.11□□□□□ -0.95
SPARC-204ENST00000521569 DCLK1O15075 740 aa9.11□□□□□ -0.95
SPARC-204ENST00000521569 ALDH1A2O94788 518 aa9.11□□□□□ -0.95
SPARC-204ENST00000521569 STAU1O95793 577 aaKnown RBP9.11□□□□□ -0.95
SPARC-204ENST00000521569 OAS1P00973 400 aaKnown RBP9.11□□□□□ -0.95
SPARC-204ENST00000521569 ITGB3P05106 788 aa9.11□□□□□ -0.95
SPARC-204ENST00000521569 CKMP06732 381 aa9.11□□□□□ -0.95
SPARC-204ENST00000521569 NEFLP07196 543 aa9.11□□□□□ -0.95
SPARC-204ENST00000521569 WARSP23381 471 aaKnown RBP9.11□□□□□ -0.95
SPARC-204ENST00000521569 P2RY2P41231 377 aa9.11□□□□□ -0.95
SPARC-204ENST00000521569 GRIA2P42262 883 aa9.11□□□□□ -0.95
SPARC-204ENST00000521569 KIR2DL1P43626 348 aaPredicted RBP9.11□□□□□ -0.95
SPARC-204ENST00000521569 NOVA1P51513 510 aaKnown RBP9.11□□□□□ -0.95
SPARC-204ENST00000521569 WNT7BP56706 349 aa9.11□□□□□ -0.95
SPARC-204ENST00000521569 GRIN1Q05586 938 aa9.11□□□□□ -0.95
SPARC-204ENST00000521569 KCNA1Q09470 495 aa9.11□□□□□ -0.95
SPARC-204ENST00000521569 KCNB1Q14721 858 aa9.11□□□□□ -0.95
SPARC-204ENST00000521569 PREPLQ4J6C6 727 aaPredicted RBP9.11□□□□□ -0.95
SPARC-204ENST00000521569 SH3PXD2AQ5TCZ1 1133 aa9.11□□□□□ -0.95
SPARC-204ENST00000521569 NAIF1Q69YI7 327 aaPredicted RBP9.11□□□□□ -0.95
SPARC-204ENST00000521569 TCEAL6Q6IPX3 200 aa9.11□□□□□ -0.95
SPARC-204ENST00000521569 CNNM4Q6P4Q7 775 aa9.11□□□□□ -0.95
SPARC-204ENST00000521569 SLC23A3Q6PIS1 610 aa9.11□□□□□ -0.95
SPARC-204ENST00000521569 UNQ6494/PRO21346Q6UXR6 183 aa9.11□□□□□ -0.95
SPARC-204ENST00000521569 DENND5BQ6ZUT9 1274 aa9.11□□□□□ -0.95
SPARC-204ENST00000521569 SV2BQ7L1I2 683 aa9.11□□□□□ -0.95
SPARC-204ENST00000521569 OSTM1Q86WC4 334 aa9.11□□□□□ -0.95
SPARC-204ENST00000521569 DDX42Q86XP3 938 aaKnown RBP eCLIP9.11□□□□□ -0.95
SPARC-204ENST00000521569 SPATA2LQ8IUW3 424 aaPredicted RBP9.11□□□□□ -0.95
SPARC-204ENST00000521569 ARL14EPQ8N8R7 260 aaPredicted RBP9.11□□□□□ -0.95
SPARC-204ENST00000521569 MYCBPAPQ8TBZ2 947 aa9.11□□□□□ -0.95
SPARC-204ENST00000521569 TCEAL3Q969E4 200 aa9.11□□□□□ -0.95
SPARC-204ENST00000521569 FAM213AQ9BRX8 229 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms