RNA–Protein interactions for RNA: ENST00000520946.1

MRPS28-206, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 411 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-206ENST00000520946 EHD2Q9NZN4 543 aa12.34□□□□□ -0.43
MRPS28-206ENST00000520946 TRPM5Q9NZQ8 1165 aa12.34□□□□□ -0.43
MRPS28-206ENST00000520946 MAGEC2Q9UBF1 373 aaPredicted RBP12.34□□□□□ -0.43
MRPS28-206ENST00000520946 SNX9Q9Y5X1 595 aa12.34□□□□□ -0.43
MRPS28-206ENST00000520946 TCHHQ07283 1943 aa12.33□□□□□ -0.44
MRPS28-206ENST00000520946 PATE3B3GLJ2 98 aa12.33□□□□□ -0.44
MRPS28-206ENST00000520946 TISP43B9A030 160 aa12.33□□□□□ -0.44
MRPS28-206ENST00000520946 SLC9A3R1O14745 358 aaPredicted RBP12.33□□□□□ -0.44
MRPS28-206ENST00000520946 BMP15O95972 392 aa12.33□□□□□ -0.44
MRPS28-206ENST00000520946 LDHAP00338 332 aaKnown RBP12.33□□□□□ -0.44
MRPS28-206ENST00000520946 APODP05090 189 aa12.33□□□□□ -0.44
MRPS28-206ENST00000520946 CFIP05156 583 aa12.33□□□□□ -0.44
MRPS28-206ENST00000520946 TMEM191BP0C7N4 346 aa12.33□□□□□ -0.44
MRPS28-206ENST00000520946 PLCG1P19174 1290 aa12.33□□□□□ -0.44
MRPS28-206ENST00000520946 DPP6P42658 865 aa12.33□□□□□ -0.44
MRPS28-206ENST00000520946 ZNF131P52739 623 aa12.33□□□□□ -0.44
MRPS28-206ENST00000520946 RBP5P82980 135 aa12.33□□□□□ -0.44
MRPS28-206ENST00000520946 MYO1EQ12965 1108 aa12.33□□□□□ -0.44
MRPS28-206ENST00000520946 SLC39A4Q6P5W5 647 aa12.33□□□□□ -0.44
MRPS28-206ENST00000520946 ARMCX6Q7L4S7 300 aa12.33□□□□□ -0.44
MRPS28-206ENST00000520946 ADGRF2Q8IZF7 708 aa12.33□□□□□ -0.44
MRPS28-206ENST00000520946 KDF1Q8NAX2 398 aaPredicted RBP12.33□□□□□ -0.44
MRPS28-206ENST00000520946 SPATA18Q8TC71 538 aa12.33□□□□□ -0.44
MRPS28-206ENST00000520946 USP33Q8TEY7 942 aa12.33□□□□□ -0.44
MRPS28-206ENST00000520946 WHAMMQ8TF30 809 aa12.33□□□□□ -0.44
MRPS28-206ENST00000520946 ZCCHC14Q8WYQ9 949 aaKnown RBP12.33□□□□□ -0.44
MRPS28-206ENST00000520946 LARP4BQ92615 738 aaKnown RBP12.33□□□□□ -0.44
MRPS28-206ENST00000520946 KCNN1Q92952 543 aa12.33□□□□□ -0.44
MRPS28-206ENST00000520946 MYRFLQ96LU7 910 aa12.33□□□□□ -0.44
MRPS28-206ENST00000520946 CCDC39Q9UFE4 941 aa12.33□□□□□ -0.44
MRPS28-206ENST00000520946 C2orf78A6NCI8 922 aa12.32□□□□□ -0.44
MRPS28-206ENST00000520946 KLF8O95600 359 aaPredicted RBP12.32□□□□□ -0.44
MRPS28-206ENST00000520946 BCKDHBP21953 392 aa12.32□□□□□ -0.44
MRPS28-206ENST00000520946 TIE1P35590 1138 aa12.32□□□□□ -0.44
MRPS28-206ENST00000520946 LONP1P36776 959 aaKnown RBP12.32□□□□□ -0.44
MRPS28-206ENST00000520946 MRPS21P82921 87 aaKnown RBP12.32□□□□□ -0.44
MRPS28-206ENST00000520946 CYP27A1Q02318 531 aa12.32□□□□□ -0.44
MRPS28-206ENST00000520946 USP4Q13107 963 aa12.32□□□□□ -0.44
MRPS28-206ENST00000520946 MAPRE1Q15691 268 aaKnown RBP12.32□□□□□ -0.44
MRPS28-206ENST00000520946 CRY1Q16526 586 aa12.32□□□□□ -0.44
MRPS28-206ENST00000520946 EOGTQ5NDL2 527 aa12.32□□□□□ -0.44
MRPS28-206ENST00000520946 NUDT18Q6ZVK8 323 aa12.32□□□□□ -0.44
MRPS28-206ENST00000520946 DYMQ7RTS9 669 aa12.32□□□□□ -0.44
MRPS28-206ENST00000520946 MDGA1Q8NFP4 955 aa12.32□□□□□ -0.44
MRPS28-206ENST00000520946 HMGB4Q8WW32 186 aa12.32□□□□□ -0.44
MRPS28-206ENST00000520946 RLN3Q8WXF3 142 aa12.32□□□□□ -0.44
MRPS28-206ENST00000520946 HVCN1Q96D96 273 aa12.32□□□□□ -0.44
MRPS28-206ENST00000520946 SAAL1Q96ER3 474 aa12.32□□□□□ -0.44
MRPS28-206ENST00000520946 FUBP3Q96I24 572 aaKnown RBP eCLIP12.32□□□□□ -0.44
MRPS28-206ENST00000520946 ACCSQ96QU6 501 aa12.32□□□□□ -0.44
MRPS28-206ENST00000520946 SLC22A12Q96S37 553 aa12.32□□□□□ -0.44
MRPS28-206ENST00000520946 GTPBP2Q9BX10 602 aaKnown RBP12.32□□□□□ -0.44
MRPS28-206ENST00000520946 RBAKQ9NYW8 714 aaPredicted RBP12.32□□□□□ -0.44
MRPS28-206ENST00000520946 ITGA11Q9UKX5 1188 aa12.32□□□□□ -0.44
MRPS28-206ENST00000520946 MMP17Q9ULZ9 603 aa12.32□□□□□ -0.44
MRPS28-206ENST00000520946 L1RE1Q9UN81 338 aa12.32□□□□□ -0.44
MRPS28-206ENST00000520946 ARHGAP26Q9UNA1 814 aa12.32□□□□□ -0.44
MRPS28-206ENST00000520946 SCN1AP35498 2009 aa12.32□□□□□ -0.44
MRPS28-206ENST00000520946 THADAQ6YHU6 1953 aa12.31□□□□□ -0.44
MRPS28-206ENST00000520946 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.31□□□□□ -0.44
MRPS28-206ENST00000520946 TNFRSF10BO14763 440 aa12.31□□□□□ -0.44
MRPS28-206ENST00000520946 GCNT3O95395 438 aa12.31□□□□□ -0.44
MRPS28-206ENST00000520946 SEC24BO95487 1268 aa12.31□□□□□ -0.44
MRPS28-206ENST00000520946 ADH1CP00326 375 aa12.31□□□□□ -0.44
MRPS28-206ENST00000520946 DDIT3P35638 169 aa12.31□□□□□ -0.44
MRPS28-206ENST00000520946 SIM1P81133 766 aaPredicted RBP12.31□□□□□ -0.44
MRPS28-206ENST00000520946 GFPT1Q06210 699 aaPredicted RBP12.31□□□□□ -0.44
MRPS28-206ENST00000520946 RESTQ13127 1097 aa12.31□□□□□ -0.44
MRPS28-206ENST00000520946 CFAP221Q4G0U5 840 aa12.31□□□□□ -0.44
MRPS28-206ENST00000520946 PREPLQ4J6C6 727 aaPredicted RBP12.31□□□□□ -0.44
MRPS28-206ENST00000520946 LYSMD4Q5XG99 296 aa12.31□□□□□ -0.44
MRPS28-206ENST00000520946 BTBD8Q5XKL5 378 aa12.31□□□□□ -0.44
MRPS28-206ENST00000520946 ZNF720Q7Z2F6 126 aa12.31□□□□□ -0.44
MRPS28-206ENST00000520946 RASSF3Q86WH2 238 aa12.31□□□□□ -0.44
MRPS28-206ENST00000520946 SFR1Q86XK3 245 aa12.31□□□□□ -0.44
MRPS28-206ENST00000520946 SYT12Q8IV01 421 aa12.31□□□□□ -0.44
MRPS28-206ENST00000520946 TMEFF1Q8IYR6 380 aa12.31□□□□□ -0.44
MRPS28-206ENST00000520946 ALLCQ8N6M5 410 aa12.31□□□□□ -0.44
MRPS28-206ENST00000520946 TOP6BLQ8N6T0 577 aa12.31□□□□□ -0.44
MRPS28-206ENST00000520946 LRRC52Q8N7C0 313 aa12.31□□□□□ -0.44
MRPS28-206ENST00000520946 TXNDC5Q8NBS9 432 aaKnown RBP12.31□□□□□ -0.44
MRPS28-206ENST00000520946 SPRYD3Q8NCJ5 442 aa12.31□□□□□ -0.44
MRPS28-206ENST00000520946 RIN3Q8TB24 985 aa12.31□□□□□ -0.44
MRPS28-206ENST00000520946 ANKRD36BP1Q96IX9 119 aa12.31□□□□□ -0.44
MRPS28-206ENST00000520946 PNKPQ96T60 521 aa12.31□□□□□ -0.44
MRPS28-206ENST00000520946 MMS19Q96T76 1030 aa12.31□□□□□ -0.44
MRPS28-206ENST00000520946 TBC1D7Q9P0N9 293 aa12.31□□□□□ -0.44
MRPS28-206ENST00000520946 EVLQ9UI08 416 aaPredicted RBP12.31□□□□□ -0.44
MRPS28-206ENST00000520946 PCDHB13Q9Y5F0 798 aa12.31□□□□□ -0.44
MRPS28-206ENST00000520946 STYXL1Q9Y6J8 313 aa12.31□□□□□ -0.44
MRPS28-206ENST00000520946 ANK1P16157 1881 aa12.31□□□□□ -0.44
MRPS28-206ENST00000520946 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.3□□□□□ -0.44
MRPS28-206ENST00000520946 K7EQS6 105 aa12.3□□□□□ -0.44
MRPS28-206ENST00000520946 LEFTY2O00292 366 aa12.3□□□□□ -0.44
MRPS28-206ENST00000520946 CDX4O14627 284 aaPredicted RBP12.3□□□□□ -0.44
MRPS28-206ENST00000520946 TRIM66O15016 1216 aa12.3□□□□□ -0.44
MRPS28-206ENST00000520946 TADA3O75528 432 aa12.3□□□□□ -0.44
MRPS28-206ENST00000520946 CLSTN1O94985 981 aa12.3□□□□□ -0.44
MRPS28-206ENST00000520946 TOP3BO95985 862 aaKnown RBP12.3□□□□□ -0.44
MRPS28-206ENST00000520946 TNNC2P02585 160 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms