RNA–Protein interactions for RNA: ENST00000519587.1

SDC2-203, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-203ENST00000519587 NSUN3Q9H649 340 aaKnown RBP14.98□□□□□ -0.01
SDC2-203ENST00000519587 TLE6Q9H808 572 aa14.98□□□□□ -0.01
SDC2-203ENST00000519587 DMAP1Q9NPF5 467 aaPredicted RBP14.98□□□□□ -0.01
SDC2-203ENST00000519587 SEPT11Q9NVA2 429 aaKnown RBP14.98□□□□□ -0.01
SDC2-203ENST00000519587 TSPAN16Q9UKR8 245 aa14.98□□□□□ -0.01
SDC2-203ENST00000519587 PCDHGC3Q9UN70 934 aa14.98□□□□□ -0.01
SDC2-203ENST00000519587 MTCL1Q9Y4B5 1905 aaKnown RBP14.98□□□□□ -0.01
SDC2-203ENST00000519587 MYO7AQ13402 2215 aa14.97□□□□□ -0.01
SDC2-203ENST00000519587 SSU72P8A0A1W2PR75 194 aa14.97□□□□□ -0.01
SDC2-203ENST00000519587 PRRG1O14668 218 aa14.97□□□□□ -0.01
SDC2-203ENST00000519587 TRIM66O15016 1216 aa14.97□□□□□ -0.01
SDC2-203ENST00000519587 AP1G2O75843 785 aa14.97□□□□□ -0.01
SDC2-203ENST00000519587 ABLIM3O94929 683 aa14.97□□□□□ -0.01
SDC2-203ENST00000519587 SRGAP2BP0DMP2 458 aa14.97□□□□□ -0.01
SDC2-203ENST00000519587 ATF2P15336 505 aa14.97□□□□□ -0.01
SDC2-203ENST00000519587 NPR3P17342 541 aa14.97□□□□□ -0.01
SDC2-203ENST00000519587 TNFAIP3P21580 790 aa14.97□□□□□ -0.01
SDC2-203ENST00000519587 TUFMP49411 452 aaKnown RBP14.97□□□□□ -0.01
SDC2-203ENST00000519587 RPL10AP62906 217 aaKnown RBP14.97□□□□□ -0.01
SDC2-203ENST00000519587 ADCY1Q08828 1119 aa14.97□□□□□ -0.01
SDC2-203ENST00000519587 PLD1Q13393 1074 aa14.97□□□□□ -0.01
SDC2-203ENST00000519587 PPP1R26Q5T8A7 1209 aaPredicted RBP14.97□□□□□ -0.01
SDC2-203ENST00000519587 RNF19BQ6ZMZ0 732 aa14.97□□□□□ -0.01
SDC2-203ENST00000519587 RTL10Q7L3V2 364 aa14.97□□□□□ -0.01
SDC2-203ENST00000519587 CCDC186Q7Z3E2 898 aa14.97□□□□□ -0.01
SDC2-203ENST00000519587 ANKRD52Q8NB46 1076 aa14.97□□□□□ -0.01
SDC2-203ENST00000519587 SEPT5Q99719 369 aaPredicted RBP14.97□□□□□ -0.01
SDC2-203ENST00000519587 AGPAT1Q99943 283 aa14.97□□□□□ -0.01
SDC2-203ENST00000519587 ZNF518BQ9C0D4 1074 aa14.97□□□□□ -0.01
SDC2-203ENST00000519587 HAUS4Q9H6D7 363 aa14.97□□□□□ -0.01
SDC2-203ENST00000519587 ACP6Q9NPH0 428 aa14.97□□□□□ -0.01
SDC2-203ENST00000519587 TMLHEQ9NVH6 421 aa14.97□□□□□ -0.01
SDC2-203ENST00000519587 PCDHGC5Q9Y5F6 944 aa14.97□□□□□ -0.01
SDC2-203ENST00000519587 SPDYE4A6NLX3 237 aa14.96□□□□□ -0.01
SDC2-203ENST00000519587 RFXAPO00287 272 aa14.96□□□□□ -0.01
SDC2-203ENST00000519587 MICAL2O94851 1124 aa14.96□□□□□ -0.01
SDC2-203ENST00000519587 IPO7O95373 1038 aaKnown RBP14.96□□□□□ -0.01
SDC2-203ENST00000519587 SKILP12757 684 aa14.96□□□□□ -0.01
SDC2-203ENST00000519587 BDNFP23560 247 aa14.96□□□□□ -0.01
SDC2-203ENST00000519587 SNX16P57768 344 aa14.96□□□□□ -0.01
SDC2-203ENST00000519587 DUSP6Q16828 381 aa14.96□□□□□ -0.01
SDC2-203ENST00000519587 CCDC142Q17RM4 750 aa14.96□□□□□ -0.01
SDC2-203ENST00000519587 MGAT5BQ3V5L5 792 aa14.96□□□□□ -0.01
SDC2-203ENST00000519587 HGSNATQ68CP4 663 aa14.96□□□□□ -0.01
SDC2-203ENST00000519587 PALB2Q86YC2 1186 aa14.96□□□□□ -0.01
SDC2-203ENST00000519587 TMTC1Q8IUR5 882 aa14.96□□□□□ -0.01
SDC2-203ENST00000519587 TCEAL8Q8IYN2 117 aa14.96□□□□□ -0.01
SDC2-203ENST00000519587 ATAD1Q8NBU5 361 aa14.96□□□□□ -0.01
SDC2-203ENST00000519587 TMEM35BQ8NCS4 154 aa14.96□□□□□ -0.01
SDC2-203ENST00000519587 HDAC7Q8WUI4 952 aa14.96□□□□□ -0.01
SDC2-203ENST00000519587 SLC20A1Q8WUM9 679 aa14.96□□□□□ -0.01
SDC2-203ENST00000519587 DDX1Q92499 740 aaKnown RBP14.96□□□□□ -0.01
SDC2-203ENST00000519587 CCDC42Q96M95 316 aa14.96□□□□□ -0.01
SDC2-203ENST00000519587 CEP295NLQ96MC4 621 aa14.96□□□□□ -0.01
SDC2-203ENST00000519587 BAG1Q99933 345 aaPredicted RBP14.96□□□□□ -0.01
SDC2-203ENST00000519587 LPIN3Q9BQK8 851 aa14.96□□□□□ -0.01
SDC2-203ENST00000519587 LHX5Q9H2C1 402 aa14.96□□□□□ -0.01
SDC2-203ENST00000519587 PLEKHA4Q9H4M7 779 aa14.96□□□□□ -0.01
SDC2-203ENST00000519587 CYP4F11Q9HBI6 524 aa14.96□□□□□ -0.01
SDC2-203ENST00000519587 FBXW11Q9UKB1 542 aa14.96□□□□□ -0.01
SDC2-203ENST00000519587 BDP1A6H8Y1 2624 aa14.95□□□□□ -0.02
SDC2-203ENST00000519587 CLDN5O00501 218 aa14.95□□□□□ -0.02
SDC2-203ENST00000519587 TGM5O43548 720 aa14.95□□□□□ -0.02
SDC2-203ENST00000519587 AKR1B10O60218 316 aa14.95□□□□□ -0.02
SDC2-203ENST00000519587 CLASP2O75122 1294 aaKnown RBP14.95□□□□□ -0.02
SDC2-203ENST00000519587 CALCAP01258 141 aa14.95□□□□□ -0.02
SDC2-203ENST00000519587 MMEP08473 750 aa14.95□□□□□ -0.02
SDC2-203ENST00000519587 FECHP22830 423 aa14.95□□□□□ -0.02
SDC2-203ENST00000519587 CYLC1P35663 651 aaPredicted RBP14.95□□□□□ -0.02
SDC2-203ENST00000519587 GRIK1P39086 918 aa14.95□□□□□ -0.02
SDC2-203ENST00000519587 ALDH1A3P47895 512 aa14.95□□□□□ -0.02
SDC2-203ENST00000519587 NRIP1P48552 1158 aa14.95□□□□□ -0.02
SDC2-203ENST00000519587 CLCN4P51793 760 aa14.95□□□□□ -0.02
SDC2-203ENST00000519587 FMO1Q01740 532 aa14.95□□□□□ -0.02
SDC2-203ENST00000519587 DUSP4Q13115 394 aa14.95□□□□□ -0.02
SDC2-203ENST00000519587 MAPK8IP2Q13387 824 aaPredicted RBP14.95□□□□□ -0.02
SDC2-203ENST00000519587 GRIN2CQ14957 1233 aa14.95□□□□□ -0.02
SDC2-203ENST00000519587 VEPH1Q14D04 833 aa14.95□□□□□ -0.02
SDC2-203ENST00000519587 WDR59Q6PJI9 974 aa14.95□□□□□ -0.02
SDC2-203ENST00000519587 PASD1Q8IV76 773 aa14.95□□□□□ -0.02
SDC2-203ENST00000519587 SCN4BQ8IWT1 228 aa14.95□□□□□ -0.02
SDC2-203ENST00000519587 KREMEN2Q8NCW0 462 aa14.95□□□□□ -0.02
SDC2-203ENST00000519587 IPO4Q8TEX9 1081 aaKnown RBP14.95□□□□□ -0.02
SDC2-203ENST00000519587 PPP1R9BQ96SB3 815 aa14.95□□□□□ -0.02
SDC2-203ENST00000519587 ZSWIM1Q9BR11 485 aa14.95□□□□□ -0.02
SDC2-203ENST00000519587 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.95□□□□□ -0.02
SDC2-203ENST00000519587 DUSP16Q9BY84 665 aa14.95□□□□□ -0.02
SDC2-203ENST00000519587 MIS12Q9H081 205 aa14.95□□□□□ -0.02
SDC2-203ENST00000519587 PNPLA8Q9NP80 782 aa14.95□□□□□ -0.02
SDC2-203ENST00000519587 EHD2Q9NZN4 543 aa14.95□□□□□ -0.02
SDC2-203ENST00000519587 ARHGAP20Q9P2F6 1191 aa14.95□□□□□ -0.02
SDC2-203ENST00000519587 XPO1O14980 1071 aaKnown RBP14.94□□□□□ -0.02
SDC2-203ENST00000519587 HAPLN1P10915 354 aaPredicted RBP14.94□□□□□ -0.02
SDC2-203ENST00000519587 CHRNB2P17787 502 aa14.94□□□□□ -0.02
SDC2-203ENST00000519587 CYP2F1P24903 491 aa14.94□□□□□ -0.02
SDC2-203ENST00000519587 CDH5P33151 784 aaPredicted RBP14.94□□□□□ -0.02
SDC2-203ENST00000519587 EIF4A3P38919 411 aaKnown RBP14.94□□□□□ -0.02
SDC2-203ENST00000519587 NSFP46459 744 aaKnown RBP14.94□□□□□ -0.02
SDC2-203ENST00000519587 DENND1BQ6P3S1 775 aa14.94□□□□□ -0.02
SDC2-203ENST00000519587 LILRA6Q6PI73 481 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms