RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 VAMP7P51809 220 aa13.38□□□□□ -0.27
SMAD1-215ENST00000515385 NUP107P57740 925 aa13.38□□□□□ -0.27
SMAD1-215ENST00000515385 AP3B2Q13367 1082 aa13.38□□□□□ -0.27
SMAD1-215ENST00000515385 TLR1Q15399 786 aa13.38□□□□□ -0.27
SMAD1-215ENST00000515385 GRAMD1BQ3KR37 738 aa13.38□□□□□ -0.27
SMAD1-215ENST00000515385 C16orf87Q6PH81 154 aa13.38□□□□□ -0.27
SMAD1-215ENST00000515385 SLC15A3Q8IY34 581 aa13.38□□□□□ -0.27
SMAD1-215ENST00000515385 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.38□□□□□ -0.27
SMAD1-215ENST00000515385 ACTRT2Q8TDY3 377 aa13.38□□□□□ -0.27
SMAD1-215ENST00000515385 APBB2Q92870 758 aa13.38□□□□□ -0.27
SMAD1-215ENST00000515385 HNRNPABQ99729 332 aaKnown RBP13.38□□□□□ -0.27
SMAD1-215ENST00000515385 MRPL1Q9BYD6 325 aaKnown RBP13.38□□□□□ -0.27
SMAD1-215ENST00000515385 INIPQ9NRY2 104 aa13.38□□□□□ -0.27
SMAD1-215ENST00000515385 RSL24D1Q9UHA3 163 aaKnown RBP13.38□□□□□ -0.27
SMAD1-215ENST00000515385 ITGA11Q9UKX5 1188 aa13.38□□□□□ -0.27
SMAD1-215ENST00000515385 CTDP1Q9Y5B0 961 aaPredicted RBP13.38□□□□□ -0.27
SMAD1-215ENST00000515385 DENND3A2RUS2 1198 aa13.38□□□□□ -0.27
SMAD1-215ENST00000515385 CYP26A1O43174 497 aa13.38□□□□□ -0.27
SMAD1-215ENST00000515385 ADCY3O60266 1144 aa13.38□□□□□ -0.27
SMAD1-215ENST00000515385 DNAJA2O60884 412 aa13.38□□□□□ -0.27
SMAD1-215ENST00000515385 FAM58BPP0C7Q3 252 aa13.38□□□□□ -0.27
SMAD1-215ENST00000515385 CDH2P19022 906 aaPredicted RBP13.38□□□□□ -0.27
SMAD1-215ENST00000515385 ACAT1P24752 427 aaKnown RBP13.38□□□□□ -0.27
SMAD1-215ENST00000515385 SERPINB6P35237 376 aa13.38□□□□□ -0.27
SMAD1-215ENST00000515385 ALDH1A3P47895 512 aa13.38□□□□□ -0.27
SMAD1-215ENST00000515385 CDK9P50750 372 aaKnown RBP13.38□□□□□ -0.27
SMAD1-215ENST00000515385 WASHC5Q12768 1159 aa13.38□□□□□ -0.27
SMAD1-215ENST00000515385 SLC47A2Q86VL8 602 aa13.38□□□□□ -0.27
SMAD1-215ENST00000515385 CRLF3Q8IUI8 442 aa13.38□□□□□ -0.27
SMAD1-215ENST00000515385 TTC13Q8NBP0 860 aa13.38□□□□□ -0.27
SMAD1-215ENST00000515385 CABLES1Q8TDN4 633 aa13.38□□□□□ -0.27
SMAD1-215ENST00000515385 TGFBRAP1Q8WUH2 860 aa13.38□□□□□ -0.27
SMAD1-215ENST00000515385 HSPBAP1Q96EW2 488 aa13.38□□□□□ -0.27
SMAD1-215ENST00000515385 FAM111AQ96PZ2 611 aa13.38□□□□□ -0.27
SMAD1-215ENST00000515385 PCDH9Q9HC56 1237 aa13.38□□□□□ -0.27
SMAD1-215ENST00000515385 ALG13Q9NP73 1137 aaKnown RBP13.38□□□□□ -0.27
SMAD1-215ENST00000515385 KCND2Q9NZV8 630 aa13.38□□□□□ -0.27
SMAD1-215ENST00000515385 CROTQ9UKG9 612 aa13.38□□□□□ -0.27
SMAD1-215ENST00000515385 FADS3Q9Y5Q0 445 aa13.38□□□□□ -0.27
SMAD1-215ENST00000515385 CEPT1Q9Y6K0 416 aa13.38□□□□□ -0.27
SMAD1-215ENST00000515385 ZHX2Q9Y6X8 837 aa13.38□□□□□ -0.27
SMAD1-215ENST00000515385 SHANK3Q9BYB0 1731 aa13.38□□□□□ -0.27
SMAD1-215ENST00000515385 CLUHO75153 1309 aa13.37□□□□□ -0.27
SMAD1-215ENST00000515385 PLIN4Q96Q06 1357 aa13.37□□□□□ -0.27
SMAD1-215ENST00000515385 C2orf71A6NGG8 1288 aa13.37□□□□□ -0.27
SMAD1-215ENST00000515385 H3BNX3 289 aa13.37□□□□□ -0.27
SMAD1-215ENST00000515385 ZBTB5O15062 677 aa13.37□□□□□ -0.27
SMAD1-215ENST00000515385 MAGEB3O15480 346 aa13.37□□□□□ -0.27
SMAD1-215ENST00000515385 ZBED1O96006 694 aa13.37□□□□□ -0.27
SMAD1-215ENST00000515385 LDHBP07195 334 aaKnown RBP13.37□□□□□ -0.27
SMAD1-215ENST00000515385 RAG1P15918 1043 aa13.37□□□□□ -0.27
SMAD1-215ENST00000515385 ZNF200P98182 395 aaPredicted RBP13.37□□□□□ -0.27
SMAD1-215ENST00000515385 TFDP1Q14186 410 aa13.37□□□□□ -0.27
SMAD1-215ENST00000515385 COG2Q14746 738 aa13.37□□□□□ -0.27
SMAD1-215ENST00000515385 CAPN12Q6ZSI9 719 aa13.37□□□□□ -0.27
SMAD1-215ENST00000515385 FAM178BQ8IXR5 827 aa13.37□□□□□ -0.27
SMAD1-215ENST00000515385 ADGRF4Q8IZF3 695 aa13.37□□□□□ -0.27
SMAD1-215ENST00000515385 CCDC33Q8N5R6 958 aa13.37□□□□□ -0.27
SMAD1-215ENST00000515385 DCUN1D1Q96GG9 259 aa13.37□□□□□ -0.27
SMAD1-215ENST00000515385 NRDE2Q9H7Z3 1164 aa13.37□□□□□ -0.27
SMAD1-215ENST00000515385 PSMD13Q9UNM6 376 aa13.37□□□□□ -0.27
SMAD1-215ENST00000515385 IKBKGQ9Y6K9 419 aa13.37□□□□□ -0.27
SMAD1-215ENST00000515385 SQORQ9Y6N5 450 aa13.37□□□□□ -0.27
SMAD1-215ENST00000515385 ASTN2O75129 1339 aaPredicted RBP13.37□□□□□ -0.27
SMAD1-215ENST00000515385 NHSQ6T4R5 1651 aa13.37□□□□□ -0.27
SMAD1-215ENST00000515385 HTR3EA5X5Y0 456 aa13.36□□□□□ -0.27
SMAD1-215ENST00000515385 PRR5-ARHGAP8B1AHC4 643 aa13.36□□□□□ -0.27
SMAD1-215ENST00000515385 DKC1O60832 514 aaKnown RBP eCLIP13.36□□□□□ -0.27
SMAD1-215ENST00000515385 SERPINB7O75635 380 aa13.36□□□□□ -0.27
SMAD1-215ENST00000515385 GLRA2P23416 452 aa13.36□□□□□ -0.27
SMAD1-215ENST00000515385 VCPP55072 806 aaKnown RBP13.36□□□□□ -0.27
SMAD1-215ENST00000515385 PSMC1P62191 440 aaKnown RBP13.36□□□□□ -0.27
SMAD1-215ENST00000515385 NOP14P78316 857 aaKnown RBP13.36□□□□□ -0.27
SMAD1-215ENST00000515385 ARHGAP8P85298 464 aa13.36□□□□□ -0.27
SMAD1-215ENST00000515385 PDAP1Q13442 181 aaKnown RBP13.36□□□□□ -0.27
SMAD1-215ENST00000515385 CNGA3Q16281 694 aa13.36□□□□□ -0.27
SMAD1-215ENST00000515385 RARS2Q5T160 578 aaKnown RBP13.36□□□□□ -0.27
SMAD1-215ENST00000515385 POTEAQ6S8J7 498 aa13.36□□□□□ -0.27
SMAD1-215ENST00000515385 C1orf186Q6ZWK4 172 aa13.36□□□□□ -0.27
SMAD1-215ENST00000515385 KBTBD6Q86V97 674 aa13.36□□□□□ -0.27
SMAD1-215ENST00000515385 KSR1Q8IVT5 923 aa13.36□□□□□ -0.27
SMAD1-215ENST00000515385 RCOR2Q8IZ40 523 aa13.36□□□□□ -0.27
SMAD1-215ENST00000515385 E2F7Q96AV8 911 aa13.36□□□□□ -0.27
SMAD1-215ENST00000515385 COX4I2Q96KJ9 171 aa13.36□□□□□ -0.27
SMAD1-215ENST00000515385 GCNAQ96QF7 691 aa13.36□□□□□ -0.27
SMAD1-215ENST00000515385 OSBPL6Q9BZF3 934 aa13.36□□□□□ -0.27
SMAD1-215ENST00000515385 TUFT1Q9NNX1 390 aa13.36□□□□□ -0.27
SMAD1-215ENST00000515385 INPP5FQ9Y2H2 1132 aa13.36□□□□□ -0.27
SMAD1-215ENST00000515385 E7ESA3 106 aa13.36□□□□□ -0.27
SMAD1-215ENST00000515385 GOLGA8RI6L899 631 aa13.36□□□□□ -0.27
SMAD1-215ENST00000515385 FAM189A1O60320 539 aa13.36□□□□□ -0.27
SMAD1-215ENST00000515385 PPP1R11O60927 126 aaPredicted RBP13.36□□□□□ -0.27
SMAD1-215ENST00000515385 SRGAP2CP0DJJ0 459 aa13.36□□□□□ -0.27
SMAD1-215ENST00000515385 SRGAP2BP0DMP2 458 aa13.36□□□□□ -0.27
SMAD1-215ENST00000515385 VDRP11473 427 aa13.36□□□□□ -0.27
SMAD1-215ENST00000515385 BMP3P12645 472 aa13.36□□□□□ -0.27
SMAD1-215ENST00000515385 PCSK6P29122 969 aa13.36□□□□□ -0.27
SMAD1-215ENST00000515385 COPAP53621 1224 aa13.36□□□□□ -0.27
SMAD1-215ENST00000515385 HIRAP54198 1017 aaPredicted RBP13.36□□□□□ -0.27
SMAD1-215ENST00000515385 RELAQ04206 551 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms