RNA–Protein interactions for RNA: ENST00000514755.5

UBE2D3-232, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-232ENST00000514755 TMC8Q8IU68 726 aa11.79□□□□□ -0.52
UBE2D3-232ENST00000514755 NPAS3Q8IXF0 933 aa11.79□□□□□ -0.52
UBE2D3-232ENST00000514755 GPR152Q8TDT2 470 aa11.79□□□□□ -0.52
UBE2D3-232ENST00000514755 EDAQ92838 391 aa11.79□□□□□ -0.52
UBE2D3-232ENST00000514755 FGF14Q92915 247 aa11.79□□□□□ -0.52
UBE2D3-232ENST00000514755 MCRS1Q96EZ8 462 aa11.79□□□□□ -0.52
UBE2D3-232ENST00000514755 DUSP9Q99956 384 aaKnown RBP11.79□□□□□ -0.52
UBE2D3-232ENST00000514755 LRFN3Q9BTN0 628 aa11.79□□□□□ -0.52
UBE2D3-232ENST00000514755 PI4K2AQ9BTU6 479 aa11.79□□□□□ -0.52
UBE2D3-232ENST00000514755 SDCBP2Q9H190 292 aa11.79□□□□□ -0.52
UBE2D3-232ENST00000514755 DPEP3Q9H4B8 488 aa11.79□□□□□ -0.52
UBE2D3-232ENST00000514755 SMYD3Q9H7B4 428 aa11.79□□□□□ -0.52
UBE2D3-232ENST00000514755 ZNF334Q9HCZ1 680 aaPredicted RBP11.79□□□□□ -0.52
UBE2D3-232ENST00000514755 CRTAC1Q9NQ79 661 aa11.79□□□□□ -0.52
UBE2D3-232ENST00000514755 LMBRD1Q9NUN5 540 aa11.79□□□□□ -0.52
UBE2D3-232ENST00000514755 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.79□□□□□ -0.526e-9■□□□□ 11.3
UBE2D3-232ENST00000514755 CDH7Q9ULB5 785 aa11.79□□□□□ -0.52
UBE2D3-232ENST00000514755 MAFFQ9ULX9 164 aa11.79□□□□□ -0.52
UBE2D3-232ENST00000514755 SORCS3Q9UPU3 1222 aa11.79□□□□□ -0.52
UBE2D3-232ENST00000514755 MRPS23Q9Y3D9 190 aaKnown RBP11.79□□□□□ -0.52
UBE2D3-232ENST00000514755 IKBKBO14920 756 aa11.78□□□□□ -0.52
UBE2D3-232ENST00000514755 CETN3O15182 167 aa11.78□□□□□ -0.52
UBE2D3-232ENST00000514755 HLA-DRAP01903 254 aa11.78□□□□□ -0.52
UBE2D3-232ENST00000514755 HAPLN1P10915 354 aaPredicted RBP11.78□□□□□ -0.52
UBE2D3-232ENST00000514755 MYL4P12829 197 aa11.78□□□□□ -0.52
UBE2D3-232ENST00000514755 CYP2F1P24903 491 aa11.78□□□□□ -0.52
UBE2D3-232ENST00000514755 ATICP31939 592 aa11.78□□□□□ -0.52
UBE2D3-232ENST00000514755 LHX1P48742 406 aa11.78□□□□□ -0.52
UBE2D3-232ENST00000514755 AP3M2P53677 418 aa11.78□□□□□ -0.52
UBE2D3-232ENST00000514755 STX17P56962 302 aa11.78□□□□□ -0.52
UBE2D3-232ENST00000514755 TNNC1P63316 161 aa11.78□□□□□ -0.52
UBE2D3-232ENST00000514755 TSPY1Q01534 308 aa11.78□□□□□ -0.52
UBE2D3-232ENST00000514755 ZNF699Q32M78 642 aa11.78□□□□□ -0.52
UBE2D3-232ENST00000514755 FAM171BQ6P995 826 aa11.78□□□□□ -0.52
UBE2D3-232ENST00000514755 PARM1Q6UWI2 310 aa11.78□□□□□ -0.52
UBE2D3-232ENST00000514755 SCARA5Q6ZMJ2 495 aa11.78□□□□□ -0.52
UBE2D3-232ENST00000514755 DCP1BQ8IZD4 617 aaKnown RBP11.78□□□□□ -0.52
UBE2D3-232ENST00000514755 OR6B3Q8NGW1 331 aa11.78□□□□□ -0.52
UBE2D3-232ENST00000514755 SPPL2BQ8TCT7 592 aa11.78□□□□□ -0.52
UBE2D3-232ENST00000514755 TAS1R2Q8TE23 839 aa11.78□□□□□ -0.52
UBE2D3-232ENST00000514755 GIPC2Q8TF65 315 aa11.78□□□□□ -0.52
UBE2D3-232ENST00000514755 SYAP1Q96A49 352 aaPredicted RBP11.78□□□□□ -0.52
UBE2D3-232ENST00000514755 ASIC4Q96FT7 647 aa11.78□□□□□ -0.52
UBE2D3-232ENST00000514755 ZNF512Q96ME7 567 aaPredicted RBP11.78□□□□□ -0.52
UBE2D3-232ENST00000514755 SYT15Q9BQS2 421 aa11.78□□□□□ -0.52
UBE2D3-232ENST00000514755 C1QTNF1Q9BXJ1 281 aa11.78□□□□□ -0.52
UBE2D3-232ENST00000514755 VRTNQ9H8Y1 702 aa11.78□□□□□ -0.52
UBE2D3-232ENST00000514755 APOBEC3GQ9HC16 384 aaKnown RBP11.78□□□□□ -0.52
UBE2D3-232ENST00000514755 AVENQ9NQS1 362 aaPredicted RBP11.78□□□□□ -0.52
UBE2D3-232ENST00000514755 CTNND2Q9UQB3 1225 aa11.78□□□□□ -0.52
UBE2D3-232ENST00000514755 NUMBLQ9Y6R0 609 aa11.78□□□□□ -0.52
UBE2D3-232ENST00000514755 TTC24A2A3L6 582 aaPredicted RBP11.77□□□□□ -0.53
UBE2D3-232ENST00000514755 ANHXE9PGG2 379 aa11.77□□□□□ -0.53
UBE2D3-232ENST00000514755 TACC1O75410 805 aa11.77□□□□□ -0.53
UBE2D3-232ENST00000514755 CLSTN1O94985 981 aa11.77□□□□□ -0.53
UBE2D3-232ENST00000514755 ASS1P00966 412 aaKnown RBP11.77□□□□□ -0.53
UBE2D3-232ENST00000514755 PDGFBP01127 241 aaPredicted RBP11.77□□□□□ -0.53
UBE2D3-232ENST00000514755 EPB41P11171 864 aaKnown RBP11.77□□□□□ -0.53
UBE2D3-232ENST00000514755 KRT13P13646 458 aa11.77□□□□□ -0.53
UBE2D3-232ENST00000514755 GNL1P36915 607 aaPredicted RBP11.77□□□□□ -0.53
UBE2D3-232ENST00000514755 ALDH1A3P47895 512 aa11.77□□□□□ -0.53
UBE2D3-232ENST00000514755 EPHB3P54753 998 aa11.77□□□□□ -0.53
UBE2D3-232ENST00000514755 EPHA5P54756 1037 aa11.77□□□□□ -0.53
UBE2D3-232ENST00000514755 FKBP3Q00688 224 aaKnown RBP11.77□□□□□ -0.53
UBE2D3-232ENST00000514755 MTMR3Q13615 1198 aa11.77□□□□□ -0.53
UBE2D3-232ENST00000514755 HTR4Q13639 388 aa11.77□□□□□ -0.53
UBE2D3-232ENST00000514755 TEAD2Q15562 447 aa11.77□□□□□ -0.53
UBE2D3-232ENST00000514755 DDR2Q16832 855 aa11.77□□□□□ -0.53
UBE2D3-232ENST00000514755 ZNF667Q5HYK9 610 aa11.77□□□□□ -0.53
UBE2D3-232ENST00000514755 TMEM31Q5JXX7 168 aa11.77□□□□□ -0.53
UBE2D3-232ENST00000514755 STXBP5Q5T5C0 1151 aa11.77□□□□□ -0.53
UBE2D3-232ENST00000514755 IQCEQ6IPM2 695 aa11.77□□□□□ -0.53
UBE2D3-232ENST00000514755 TTI2Q6NXR4 508 aa11.77□□□□□ -0.53
UBE2D3-232ENST00000514755 PDZD4Q76G19 769 aaPredicted RBP11.77□□□□□ -0.53
UBE2D3-232ENST00000514755 DNAJB7Q7Z6W7 309 aaPredicted RBP11.77□□□□□ -0.53
UBE2D3-232ENST00000514755 ELMOD1Q8N336 334 aa11.77□□□□□ -0.53
UBE2D3-232ENST00000514755 SLC44A3Q8N4M1 653 aa11.77□□□□□ -0.53
UBE2D3-232ENST00000514755 SHKBP1Q8TBC3 707 aa11.77□□□□□ -0.53
UBE2D3-232ENST00000514755 SPATA18Q8TC71 538 aa11.77□□□□□ -0.53
UBE2D3-232ENST00000514755 C2orf15Q8WU43 125 aaKnown RBP11.77□□□□□ -0.53
UBE2D3-232ENST00000514755 NELFBQ8WX92 580 aa11.77□□□□□ -0.53
UBE2D3-232ENST00000514755 SEMA4DQ92854 862 aa11.77□□□□□ -0.53
UBE2D3-232ENST00000514755 PSMG2Q969U7 264 aa11.77□□□□□ -0.53
UBE2D3-232ENST00000514755 MYLPFQ96A32 169 aa11.77□□□□□ -0.53
UBE2D3-232ENST00000514755 DHTKD1Q96HY7 919 aaPredicted RBP11.77□□□□□ -0.53
UBE2D3-232ENST00000514755 ZSWIM3Q96MP5 696 aa11.77□□□□□ -0.53
UBE2D3-232ENST00000514755 MED15Q96RN5 788 aa11.77□□□□□ -0.53
UBE2D3-232ENST00000514755 TSG101Q99816 390 aa11.77□□□□□ -0.53
UBE2D3-232ENST00000514755 MKNK1Q9BUB5 465 aa11.77□□□□□ -0.53
UBE2D3-232ENST00000514755 ASAH2Q9NR71 780 aa11.77□□□□□ -0.53
UBE2D3-232ENST00000514755 HSFX1Q9UBD0 423 aa11.77□□□□□ -0.53
UBE2D3-232ENST00000514755 RAPGEFL1Q9UHV5 662 aa11.77□□□□□ -0.53
UBE2D3-232ENST00000514755 CDH9Q9ULB4 789 aa11.77□□□□□ -0.53
UBE2D3-232ENST00000514755 PCDHB5Q9Y5E4 795 aa11.77□□□□□ -0.53
UBE2D3-232ENST00000514755 A0A1W2PRU2 124 aa11.76□□□□□ -0.53
UBE2D3-232ENST00000514755 J3QL48 77 aa11.76□□□□□ -0.53
UBE2D3-232ENST00000514755 PSMA7O14818 248 aa11.76□□□□□ -0.53
UBE2D3-232ENST00000514755 PCSK1P29120 753 aa11.76□□□□□ -0.53
UBE2D3-232ENST00000514755 PIK3CAP42336 1068 aa11.76□□□□□ -0.53
UBE2D3-232ENST00000514755 ASPAP45381 313 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms