RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 CBWD5Q5RIA9 395 aa8.72□□□□□ -1.01
NEDD4-210ENST00000513957 SASS6Q6UVJ0 657 aa8.72□□□□□ -1.01
NEDD4-210ENST00000513957 GET4Q7L5D6 327 aaPredicted RBP8.72□□□□□ -1.01
NEDD4-210ENST00000513957 LRRTM3Q86VH5 581 aa8.72□□□□□ -1.01
NEDD4-210ENST00000513957 TMC8Q8IU68 726 aa8.72□□□□□ -1.01
NEDD4-210ENST00000513957 CRYBG2Q8N1P7 616 aa8.72□□□□□ -1.01
NEDD4-210ENST00000513957 JAKMIP2Q96AA8 810 aa8.72□□□□□ -1.01
NEDD4-210ENST00000513957 EEF2KMTQ96G04 330 aa8.72□□□□□ -1.01
NEDD4-210ENST00000513957 PCED1BQ96HM7 432 aa8.72□□□□□ -1.01
NEDD4-210ENST00000513957 FAM84AQ96KN4 292 aa8.72□□□□□ -1.01
NEDD4-210ENST00000513957 SPATA17Q96L03 361 aa8.72□□□□□ -1.01
NEDD4-210ENST00000513957 MYRFLQ96LU7 910 aa8.72□□□□□ -1.01
NEDD4-210ENST00000513957 GCNAQ96QF7 691 aa8.72□□□□□ -1.01
NEDD4-210ENST00000513957 MRPL45Q9BRJ2 306 aaKnown RBP8.72□□□□□ -1.01
NEDD4-210ENST00000513957 SRRTQ9BXP5 876 aaKnown RBP8.72□□□□□ -1.01
NEDD4-210ENST00000513957 DNAJC25Q9H1X3 360 aa8.72□□□□□ -1.01
NEDD4-210ENST00000513957 CRISPLD1Q9H336 500 aa8.72□□□□□ -1.01
NEDD4-210ENST00000513957 SMYD3Q9H7B4 428 aa8.72□□□□□ -1.01
NEDD4-210ENST00000513957 ANO10Q9NW15 660 aa8.72□□□□□ -1.01
NEDD4-210ENST00000513957 CEP72Q9P209 647 aa8.72□□□□□ -1.01
NEDD4-210ENST00000513957 MAGEC2Q9UBF1 373 aaPredicted RBP8.72□□□□□ -1.01
NEDD4-210ENST00000513957 CDH22Q9UJ99 828 aa8.72□□□□□ -1.01
NEDD4-210ENST00000513957 GTF3C4Q9UKN8 822 aa8.72□□□□□ -1.01
NEDD4-210ENST00000513957 MRPS23Q9Y3D9 190 aaKnown RBP8.72□□□□□ -1.01
NEDD4-210ENST00000513957 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.72□□□□□ -1.01
NEDD4-210ENST00000513957 CUL9Q8IWT3 2517 aa8.72□□□□□ -1.01
NEDD4-210ENST00000513957 MYBPHLA2RUH7 354 aa8.71□□□□□ -1.02
NEDD4-210ENST00000513957 RCCD1A6NED2 376 aa8.71□□□□□ -1.02
NEDD4-210ENST00000513957 SOWAHDA6NJG2 315 aa8.71□□□□□ -1.02
NEDD4-210ENST00000513957 ANHXE9PGG2 379 aa8.71□□□□□ -1.02
NEDD4-210ENST00000513957 CILPO75339 1184 aa8.71□□□□□ -1.02
NEDD4-210ENST00000513957 NOL4O94818 638 aa8.71□□□□□ -1.02
NEDD4-210ENST00000513957 LETM1O95202 739 aaPredicted RBP8.71□□□□□ -1.02
NEDD4-210ENST00000513957 AFPP02771 609 aaKnown RBP8.71□□□□□ -1.02
NEDD4-210ENST00000513957 PTPN1P18031 435 aaKnown RBP8.71□□□□□ -1.02
NEDD4-210ENST00000513957 ATF6P18850 670 aa8.71□□□□□ -1.02
NEDD4-210ENST00000513957 ACAT1P24752 427 aaKnown RBP8.71□□□□□ -1.02
NEDD4-210ENST00000513957 LMO2P25791 158 aa8.71□□□□□ -1.02
NEDD4-210ENST00000513957 ANXA13P27216 316 aa8.71□□□□□ -1.02
NEDD4-210ENST00000513957 PPP3CCP48454 512 aa8.71□□□□□ -1.02
NEDD4-210ENST00000513957 PDE6CP51160 858 aa8.71□□□□□ -1.02
NEDD4-210ENST00000513957 STX17P56962 302 aa8.71□□□□□ -1.02
NEDD4-210ENST00000513957 GCNT1Q02742 428 aa8.71□□□□□ -1.02
NEDD4-210ENST00000513957 KCNH2Q12809 1159 aa8.71□□□□□ -1.02
NEDD4-210ENST00000513957 TAF12Q16514 161 aa8.71□□□□□ -1.02
NEDD4-210ENST00000513957 STX1AQ16623 288 aa8.71□□□□□ -1.02
NEDD4-210ENST00000513957 KLHL40Q2TBA0 621 aa8.71□□□□□ -1.02
NEDD4-210ENST00000513957 ARHGAP15Q53QZ3 475 aa8.71□□□□□ -1.02
NEDD4-210ENST00000513957 TMEM164Q5U3C3 297 aa8.71□□□□□ -1.02
NEDD4-210ENST00000513957 SCARA3Q6AZY7 606 aa8.71□□□□□ -1.02
NEDD4-210ENST00000513957 DNAJB7Q7Z6W7 309 aaPredicted RBP8.71□□□□□ -1.02
NEDD4-210ENST00000513957 NPAS3Q8IXF0 933 aa8.71□□□□□ -1.02
NEDD4-210ENST00000513957 ENOX1Q8TC92 643 aaKnown RBP8.71□□□□□ -1.02
NEDD4-210ENST00000513957 FAM200AQ8TCP9 573 aa8.71□□□□□ -1.02
NEDD4-210ENST00000513957 UBXN4Q92575 508 aa8.71□□□□□ -1.02
NEDD4-210ENST00000513957 FGF13Q92913 245 aa8.71□□□□□ -1.02
NEDD4-210ENST00000513957 MYLPFQ96A32 169 aa8.71□□□□□ -1.02
NEDD4-210ENST00000513957 E2F7Q96AV8 911 aa8.71□□□□□ -1.02
NEDD4-210ENST00000513957 SMARCD1Q96GM5 515 aa8.71□□□□□ -1.02
NEDD4-210ENST00000513957 CNOT6LQ96LI5 555 aaKnown RBP8.71□□□□□ -1.02
NEDD4-210ENST00000513957 C8orf48Q96LL4 319 aa8.71□□□□□ -1.02
NEDD4-210ENST00000513957 CORO1BQ9BR76 489 aa8.71□□□□□ -1.02
NEDD4-210ENST00000513957 NT5C1AQ9BXI3 368 aa8.71□□□□□ -1.02
NEDD4-210ENST00000513957 LRRC3Q9BY71 257 aa8.71□□□□□ -1.02
NEDD4-210ENST00000513957 NAT10Q9H0A0 1025 aaKnown RBP8.71□□□□□ -1.02
NEDD4-210ENST00000513957 MMRN2Q9H8L6 949 aa8.71□□□□□ -1.02
NEDD4-210ENST00000513957 PNPLA8Q9NP80 782 aa8.71□□□□□ -1.02
NEDD4-210ENST00000513957 CD320Q9NPF0 282 aa8.71□□□□□ -1.02
NEDD4-210ENST00000513957 CRTAC1Q9NQ79 661 aa8.71□□□□□ -1.02
NEDD4-210ENST00000513957 TMLHEQ9NVH6 421 aa8.71□□□□□ -1.02
NEDD4-210ENST00000513957 HCFC1R1Q9NWW0 138 aa8.71□□□□□ -1.02
NEDD4-210ENST00000513957 COMMD8Q9NX08 183 aa8.71□□□□□ -1.02
NEDD4-210ENST00000513957 BDP1A6H8Y1 2624 aa8.71□□□□□ -1.02
NEDD4-210ENST00000513957 PDGFRBP09619 1106 aa8.7□□□□□ -1.02
NEDD4-210ENST00000513957 EEF1GP26641 437 aaKnown RBP8.7□□□□□ -1.02
NEDD4-210ENST00000513957 NDST1P52848 882 aa8.7□□□□□ -1.02
NEDD4-210ENST00000513957 PRSS12P56730 875 aa8.7□□□□□ -1.02
NEDD4-210ENST00000513957 PSMC1P62191 440 aaKnown RBP8.7□□□□□ -1.02
NEDD4-210ENST00000513957 CYP27A1Q02318 531 aa8.7□□□□□ -1.02
NEDD4-210ENST00000513957 SIGLEC14Q08ET2 396 aa8.7□□□□□ -1.02
NEDD4-210ENST00000513957 TDGQ13569 410 aa8.7□□□□□ -1.02
NEDD4-210ENST00000513957 CUL2Q13617 745 aa8.7□□□□□ -1.02
NEDD4-210ENST00000513957 HTR4Q13639 388 aa8.7□□□□□ -1.02
NEDD4-210ENST00000513957 MAN2A1Q16706 1144 aa8.7□□□□□ -1.02
NEDD4-210ENST00000513957 C6orf132Q5T0Z8 1188 aa8.7□□□□□ -1.02
NEDD4-210ENST00000513957 SPOPLQ6IQ16 392 aa8.7□□□□□ -1.02
NEDD4-210ENST00000513957 PHLDB3Q6NSJ2 640 aa8.7□□□□□ -1.02
NEDD4-210ENST00000513957 TMEM92Q6UXU6 159 aa8.7□□□□□ -1.02
NEDD4-210ENST00000513957 SCARA5Q6ZMJ2 495 aa8.7□□□□□ -1.02
NEDD4-210ENST00000513957 ENOSF1Q7L5Y1 443 aa8.7□□□□□ -1.02
NEDD4-210ENST00000513957 TTC9BQ8N6N2 239 aa8.7□□□□□ -1.02
NEDD4-210ENST00000513957 OVCA2Q8WZ82 227 aa8.7□□□□□ -1.02
NEDD4-210ENST00000513957 EDAQ92838 391 aa8.7□□□□□ -1.02
NEDD4-210ENST00000513957 NT5C1BQ96P26 610 aa8.7□□□□□ -1.02
NEDD4-210ENST00000513957 MYADMQ96S97 322 aa8.7□□□□□ -1.02
NEDD4-210ENST00000513957 PI4K2AQ9BTU6 479 aa8.7□□□□□ -1.02
NEDD4-210ENST00000513957 TTLL2Q9BWV7 592 aa8.7□□□□□ -1.02
NEDD4-210ENST00000513957 SDCBP2Q9H190 292 aa8.7□□□□□ -1.02
NEDD4-210ENST00000513957 KCNK12Q9HB15 430 aa8.7□□□□□ -1.02
NEDD4-210ENST00000513957 TRPV4Q9HBA0 871 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms