RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 LTB4R2Q9NPC1 389 aa7.8□□□□□ -1.16
USP46-208ENST00000512656 ASAH2Q9NR71 780 aa7.8□□□□□ -1.16
USP46-208ENST00000512656 UBQLN1Q9UMX0 589 aaKnown RBP7.8□□□□□ -1.16
USP46-208ENST00000512656 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.8□□□□□ -1.16
USP46-208ENST00000512656 PCDHGA2Q9Y5H1 932 aa7.8□□□□□ -1.16
USP46-208ENST00000512656 CACNA1IQ9P0X4 2223 aa7.8□□□□□ -1.16
USP46-208ENST00000512656 TTC26A0AVF1 554 aa7.79□□□□□ -1.16
USP46-208ENST00000512656 M0QZQ0 153 aa7.79□□□□□ -1.16
USP46-208ENST00000512656 OGTO15294 1046 aa7.79□□□□□ -1.16
USP46-208ENST00000512656 LRRN2O75325 713 aa7.79□□□□□ -1.16
USP46-208ENST00000512656 TBCAO75347 108 aaKnown RBP7.79□□□□□ -1.16
USP46-208ENST00000512656 SASH3O75995 380 aa7.79□□□□□ -1.16
USP46-208ENST00000512656 OAZ2O95190 189 aa7.79□□□□□ -1.16
USP46-208ENST00000512656 SEC24AO95486 1093 aa7.79□□□□□ -1.16
USP46-208ENST00000512656 KRT18P05783 430 aaKnown RBP7.79□□□□□ -1.16
USP46-208ENST00000512656 CENPBP07199 599 aaPredicted RBP7.79□□□□□ -1.16
USP46-208ENST00000512656 CXCL8P10145 99 aa7.79□□□□□ -1.16
USP46-208ENST00000512656 MYL4P12829 197 aa7.79□□□□□ -1.16
USP46-208ENST00000512656 GLULP15104 373 aa7.79□□□□□ -1.16
USP46-208ENST00000512656 GJB2P29033 226 aa7.79□□□□□ -1.16
USP46-208ENST00000512656 ALDH1A3P47895 512 aa7.79□□□□□ -1.16
USP46-208ENST00000512656 EPHB3P54753 998 aa7.79□□□□□ -1.16
USP46-208ENST00000512656 CSTF1Q05048 431 aaKnown RBP7.79□□□□□ -1.16
USP46-208ENST00000512656 MYBPC2Q14324 1141 aa7.79□□□□□ -1.16
USP46-208ENST00000512656 PPP2R5DQ14738 602 aa7.79□□□□□ -1.16
USP46-208ENST00000512656 C8orf34Q49A92 452 aa7.79□□□□□ -1.16
USP46-208ENST00000512656 TMEM119Q4V9L6 283 aa7.79□□□□□ -1.16
USP46-208ENST00000512656 SEZ6Q53EL9 994 aa7.79□□□□□ -1.16
USP46-208ENST00000512656 FAM78AQ5JUQ0 283 aa7.79□□□□□ -1.16
USP46-208ENST00000512656 PRSS36Q5K4E3 855 aa7.79□□□□□ -1.16
USP46-208ENST00000512656 PERM1Q5SV97 790 aa7.79□□□□□ -1.16
USP46-208ENST00000512656 LARP1BQ659C4 914 aaKnown RBP7.79□□□□□ -1.16
USP46-208ENST00000512656 TANGO2Q6ICL3 276 aa7.79□□□□□ -1.16
USP46-208ENST00000512656 ARMCX5Q6P1M9 558 aa7.79□□□□□ -1.16
USP46-208ENST00000512656 DSTYKQ6XUX3 929 aa7.79□□□□□ -1.16
USP46-208ENST00000512656 GPBP1Q86WP2 473 aa7.79□□□□□ -1.16
USP46-208ENST00000512656 DMRTC2Q8IXT2 367 aaPredicted RBP7.79□□□□□ -1.16
USP46-208ENST00000512656 MYCT1Q8N699 235 aa7.79□□□□□ -1.16
USP46-208ENST00000512656 BEST2Q8NFU1 509 aa7.79□□□□□ -1.16
USP46-208ENST00000512656 DEPDC1BQ8WUY9 529 aa7.79□□□□□ -1.16
USP46-208ENST00000512656 SMARCD2Q92925 531 aa7.79□□□□□ -1.16
USP46-208ENST00000512656 SECISBP2LQ93073 1101 aaKnown RBP7.79□□□□□ -1.16
USP46-208ENST00000512656 CLDN23Q96B33 292 aa7.79□□□□□ -1.16
USP46-208ENST00000512656 TMX3Q96JJ7 454 aa7.79□□□□□ -1.16
USP46-208ENST00000512656 ASB16Q96NS5 453 aa7.79□□□□□ -1.16
USP46-208ENST00000512656 PLIN2Q99541 437 aa7.79□□□□□ -1.16
USP46-208ENST00000512656 IER2Q9BTL4 223 aa7.79□□□□□ -1.16
USP46-208ENST00000512656 FAM126AQ9BYI3 521 aaPredicted RBP7.79□□□□□ -1.16
USP46-208ENST00000512656 SLITRK6Q9H5Y7 841 aa7.79□□□□□ -1.16
USP46-208ENST00000512656 RPF1Q9H9Y2 349 aaKnown RBP7.79□□□□□ -1.16
USP46-208ENST00000512656 PARVGQ9HBI0 331 aa7.79□□□□□ -1.16
USP46-208ENST00000512656 TRPV5Q9NQA5 729 aa7.79□□□□□ -1.16
USP46-208ENST00000512656 TUBGCP4Q9UGJ1 667 aa7.79□□□□□ -1.16
USP46-208ENST00000512656 TBX20Q9UMR3 447 aa7.79□□□□□ -1.16
USP46-208ENST00000512656 SMC3Q9UQE7 1217 aa7.79□□□□□ -1.16
USP46-208ENST00000512656 VWA8A3KMH1 1905 aa7.79□□□□□ -1.16
USP46-208ENST00000512656 DOCK6Q96HP0 2047 aa7.79□□□□□ -1.16
USP46-208ENST00000512656 LACTBL1A8MY62 500 aa7.78□□□□□ -1.16
USP46-208ENST00000512656 K7ENM7 598 aa7.78□□□□□ -1.16
USP46-208ENST00000512656 FGF19O95750 216 aa7.78□□□□□ -1.16
USP46-208ENST00000512656 PIGRP01833 764 aa7.78□□□□□ -1.16
USP46-208ENST00000512656 ODC1P11926 461 aa7.78□□□□□ -1.16
USP46-208ENST00000512656 PSMC3P17980 439 aa7.78□□□□□ -1.16
USP46-208ENST00000512656 TYMPP19971 482 aa7.78□□□□□ -1.16
USP46-208ENST00000512656 CD72P21854 359 aa7.78□□□□□ -1.16
USP46-208ENST00000512656 FCARP24071 287 aa7.78□□□□□ -1.16
USP46-208ENST00000512656 SOX18P35713 384 aa7.78□□□□□ -1.16
USP46-208ENST00000512656 LONP1P36776 959 aaKnown RBP7.78□□□□□ -1.16
USP46-208ENST00000512656 AARSP49588 968 aaKnown RBP eCLIP7.78□□□□□ -1.16
USP46-208ENST00000512656 EPHA5P54756 1037 aa7.78□□□□□ -1.16
USP46-208ENST00000512656 TWF1Q12792 350 aa7.78□□□□□ -1.16
USP46-208ENST00000512656 GPR17Q13304 367 aa7.78□□□□□ -1.16
USP46-208ENST00000512656 ZBTB6Q15916 424 aa7.78□□□□□ -1.16
USP46-208ENST00000512656 OCLNQ16625 522 aa7.78□□□□□ -1.16
USP46-208ENST00000512656 ARSHQ5FYA8 562 aa7.78□□□□□ -1.16
USP46-208ENST00000512656 COX20Q5RI15 118 aa7.78□□□□□ -1.16
USP46-208ENST00000512656 OVOS1Q6IE37 1185 aa7.78□□□□□ -1.16
USP46-208ENST00000512656 SLFN12LQ6IEE8 588 aa7.78□□□□□ -1.16
USP46-208ENST00000512656 C1orf228Q6PIY5 440 aa7.78□□□□□ -1.16
USP46-208ENST00000512656 BRAPQ7Z569 592 aa7.78□□□□□ -1.16
USP46-208ENST00000512656 TREML1Q86YW5 311 aa7.78□□□□□ -1.16
USP46-208ENST00000512656 YAF2Q8IY57 180 aa7.78□□□□□ -1.16
USP46-208ENST00000512656 TCEAL4Q96EI5 215 aa7.78□□□□□ -1.16
USP46-208ENST00000512656 MSANTD3Q96H12 275 aa7.78□□□□□ -1.16
USP46-208ENST00000512656 REEP2Q9BRK0 252 aa7.78□□□□□ -1.16
USP46-208ENST00000512656 MSTO1Q9BUK6 570 aa7.78□□□□□ -1.16
USP46-208ENST00000512656 PLA2G2FQ9BZM2 168 aa7.78□□□□□ -1.16
USP46-208ENST00000512656 ZHX3Q9H4I2 956 aa7.78□□□□□ -1.16
USP46-208ENST00000512656 TRPV4Q9HBA0 871 aa7.78□□□□□ -1.16
USP46-208ENST00000512656 HEBP1Q9NRV9 189 aa7.78□□□□□ -1.16
USP46-208ENST00000512656 ZSCAN32Q9NX65 697 aa7.78□□□□□ -1.16
USP46-208ENST00000512656 CEP72Q9P209 647 aa7.78□□□□□ -1.16
USP46-208ENST00000512656 DERAQ9Y315 318 aa7.78□□□□□ -1.16
USP46-208ENST00000512656 MTF2Q9Y483 593 aaPredicted RBP7.78□□□□□ -1.16
USP46-208ENST00000512656 YIPF1Q9Y548 306 aa7.78□□□□□ -1.16
USP46-208ENST00000512656 ASB3Q9Y575 518 aa7.78□□□□□ -1.16
USP46-208ENST00000512656 EPG5Q9HCE0 2579 aa7.78□□□□□ -1.16
USP46-208ENST00000512656 CITO14578 2027 aa7.78□□□□□ -1.16
USP46-208ENST00000512656 TRIP11Q15643 1979 aa7.77□□□□□ -1.17
USP46-208ENST00000512656 A0A0B4J269 797 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms