RNA–Protein interactions for RNA: ENST00000512452.1

DEPDC1B-206, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-206ENST00000512452 GABRB2P47870 512 aa13.85□□□□□ -0.19
DEPDC1B-206ENST00000512452 MARCKSL1P49006 195 aa13.85□□□□□ -0.19
DEPDC1B-206ENST00000512452 CDH8P55286 799 aa13.85□□□□□ -0.19
DEPDC1B-206ENST00000512452 SNX16P57768 344 aa13.85□□□□□ -0.19
DEPDC1B-206ENST00000512452 GABPB1Q06547 395 aaPredicted RBP13.85□□□□□ -0.19
DEPDC1B-206ENST00000512452 ZNF211Q13398 564 aaPredicted RBP13.85□□□□□ -0.19
DEPDC1B-206ENST00000512452 PPIGQ13427 754 aaKnown RBP eCLIP13.85□□□□□ -0.197e-8■□□□□ 9.6
DEPDC1B-206ENST00000512452 ACAP1Q15027 740 aa13.85□□□□□ -0.19
DEPDC1B-206ENST00000512452 ZNF394Q53GI3 561 aa13.85□□□□□ -0.19
DEPDC1B-206ENST00000512452 ALS2CLQ60I27 953 aa13.85□□□□□ -0.19
DEPDC1B-206ENST00000512452 DENND1BQ6P3S1 775 aa13.85□□□□□ -0.19
DEPDC1B-206ENST00000512452 LCLAT1Q6UWP7 414 aa13.85□□□□□ -0.19
DEPDC1B-206ENST00000512452 SERINC5Q86VE9 423 aa13.85□□□□□ -0.19
DEPDC1B-206ENST00000512452 KLHDC9Q8NEP7 349 aa13.85□□□□□ -0.19
DEPDC1B-206ENST00000512452 EXD1Q8NHP7 514 aa13.85□□□□□ -0.19
DEPDC1B-206ENST00000512452 CASKIN2Q8WXE0 1202 aa13.85□□□□□ -0.19
DEPDC1B-206ENST00000512452 SLCO2A1Q92959 643 aa13.85□□□□□ -0.19
DEPDC1B-206ENST00000512452 DDX27Q96GQ7 796 aaKnown RBP13.85□□□□□ -0.19
DEPDC1B-206ENST00000512452 DDX47Q9H0S4 455 aaKnown RBP13.85□□□□□ -0.19
DEPDC1B-206ENST00000512452 CHORDC1Q9UHD1 332 aaPredicted RBP13.85□□□□□ -0.19
DEPDC1B-206ENST00000512452 HPCAL4Q9UM19 191 aa13.85□□□□□ -0.19
DEPDC1B-206ENST00000512452 MYADML2A6NDP7 307 aa13.84□□□□□ -0.19
DEPDC1B-206ENST00000512452 PIRO00625 290 aa13.84□□□□□ -0.19
DEPDC1B-206ENST00000512452 CABYRO75952 493 aa13.84□□□□□ -0.19
DEPDC1B-206ENST00000512452 RAP1GAPP47736 663 aa13.84□□□□□ -0.19
DEPDC1B-206ENST00000512452 NDST1P52848 882 aa13.84□□□□□ -0.19
DEPDC1B-206ENST00000512452 COPS2P61201 443 aa13.84□□□□□ -0.19
DEPDC1B-206ENST00000512452 IRX5P78411 483 aaPredicted RBP13.84□□□□□ -0.19
DEPDC1B-206ENST00000512452 CBX1P83916 185 aa13.84□□□□□ -0.19
DEPDC1B-206ENST00000512452 ZNF200P98182 395 aaPredicted RBP13.84□□□□□ -0.19
DEPDC1B-206ENST00000512452 DR1Q01658 176 aa13.84□□□□□ -0.19
DEPDC1B-206ENST00000512452 NBPF20Q3BBV1 942 aa13.84□□□□□ -0.19
DEPDC1B-206ENST00000512452 HSP90B2PQ58FF3 399 aa13.84□□□□□ -0.19
DEPDC1B-206ENST00000512452 C9orf57Q5W0N0 161 aa13.84□□□□□ -0.19
DEPDC1B-206ENST00000512452 DCUN1D2Q6PH85 259 aa13.84□□□□□ -0.19
DEPDC1B-206ENST00000512452 SYDE1Q6ZW31 735 aaPredicted RBP13.84□□□□□ -0.19
DEPDC1B-206ENST00000512452 ZNF365Q70YC5 407 aa13.84□□□□□ -0.19
DEPDC1B-206ENST00000512452 SND1Q7KZF4 910 aaKnown RBP eCLIP13.84□□□□□ -0.19
DEPDC1B-206ENST00000512452 PRELID2Q8N945 189 aa13.84□□□□□ -0.19
DEPDC1B-206ENST00000512452 PCSK9Q8NBP7 692 aaKnown RBP13.84□□□□□ -0.19
DEPDC1B-206ENST00000512452 FAM71BQ8TC56 605 aa13.84□□□□□ -0.19
DEPDC1B-206ENST00000512452 TMEM40Q8WWA1 233 aa13.84□□□□□ -0.19
DEPDC1B-206ENST00000512452 C18orf8Q96DM3 657 aa13.84□□□□□ -0.19
DEPDC1B-206ENST00000512452 ZMAT2Q96NC0 199 aaKnown RBP13.84□□□□□ -0.19
DEPDC1B-206ENST00000512452 NXF3Q9H4D5 531 aaKnown RBP13.84□□□□□ -0.19
DEPDC1B-206ENST00000512452 LRRC19Q9H756 370 aa13.84□□□□□ -0.19
DEPDC1B-206ENST00000512452 GDAP2Q9NXN4 497 aa13.84□□□□□ -0.19
DEPDC1B-206ENST00000512452 DDX56Q9NY93 547 aaKnown RBP13.84□□□□□ -0.19
DEPDC1B-206ENST00000512452 PDCD11Q14690 1871 aaKnown RBP13.84□□□□□ -0.19
DEPDC1B-206ENST00000512452 CHD9Q3L8U1 2897 aa13.83□□□□□ -0.2
DEPDC1B-206ENST00000512452 SMIM28A0A1B0GU29 152 aa13.83□□□□□ -0.2
DEPDC1B-206ENST00000512452 PQBP1O60828 265 aaKnown RBP13.83□□□□□ -0.2
DEPDC1B-206ENST00000512452 MICAL2O94851 1124 aa13.83□□□□□ -0.2
DEPDC1B-206ENST00000512452 TIMP1P01033 207 aa13.83□□□□□ -0.2
DEPDC1B-206ENST00000512452 PTPN7P35236 360 aa13.83□□□□□ -0.2
DEPDC1B-206ENST00000512452 CARSP49589 748 aaKnown RBP13.83□□□□□ -0.2
DEPDC1B-206ENST00000512452 SV2CQ496J9 727 aa13.83□□□□□ -0.2
DEPDC1B-206ENST00000512452 PTPN20Q4JDL3 420 aa13.83□□□□□ -0.2
DEPDC1B-206ENST00000512452 SPDYCQ5MJ68 293 aa13.83□□□□□ -0.2
DEPDC1B-206ENST00000512452 DPH6Q7L8W6 267 aa13.83□□□□□ -0.2
DEPDC1B-206ENST00000512452 LIMS2Q7Z4I7 341 aa13.83□□□□□ -0.2
DEPDC1B-206ENST00000512452 POLNQ7Z5Q5 900 aa13.83□□□□□ -0.2
DEPDC1B-206ENST00000512452 FAM228AQ86W67 206 aa13.83□□□□□ -0.2
DEPDC1B-206ENST00000512452 RCOR2Q8IZ40 523 aa13.83□□□□□ -0.2
DEPDC1B-206ENST00000512452 IPO4Q8TEX9 1081 aaKnown RBP13.83□□□□□ -0.2
DEPDC1B-206ENST00000512452 STK32AQ8WU08 396 aa13.83□□□□□ -0.2
DEPDC1B-206ENST00000512452 MAGOHBQ96A72 148 aaKnown RBP13.83□□□□□ -0.2
DEPDC1B-206ENST00000512452 LRRC45Q96CN5 670 aa13.83□□□□□ -0.2
DEPDC1B-206ENST00000512452 RBM41Q96IZ5 413 aaKnown RBP13.83□□□□□ -0.2
DEPDC1B-206ENST00000512452 HEXIM2Q96MH2 286 aaKnown RBP13.83□□□□□ -0.2
DEPDC1B-206ENST00000512452 TWNKQ96RR1 684 aa13.83□□□□□ -0.2
DEPDC1B-206ENST00000512452 ERP44Q9BS26 406 aa13.83□□□□□ -0.2
DEPDC1B-206ENST00000512452 TRIM7Q9C029 511 aa13.83□□□□□ -0.2
DEPDC1B-206ENST00000512452 XPNPEP3Q9NQH7 507 aa13.83□□□□□ -0.2
DEPDC1B-206ENST00000512452 SLC38A7Q9NVC3 462 aa13.83□□□□□ -0.2
DEPDC1B-206ENST00000512452 PARP2Q9UGN5 583 aa13.83□□□□□ -0.2
DEPDC1B-206ENST00000512452 AMACRQ9UHK6 382 aa13.83□□□□□ -0.2
DEPDC1B-206ENST00000512452 FEZ2Q9UHY8 353 aaPredicted RBP13.83□□□□□ -0.2
DEPDC1B-206ENST00000512452 IPPQ9Y573 584 aa13.83□□□□□ -0.2
DEPDC1B-206ENST00000512452 CDY2AQ9Y6F7 541 aa13.83□□□□□ -0.2
DEPDC1B-206ENST00000512452 M0QYV0 167 aa13.82□□□□□ -0.2
DEPDC1B-206ENST00000512452 GPR182O15218 404 aa13.82□□□□□ -0.2
DEPDC1B-206ENST00000512452 CAND2O75155 1236 aa13.82□□□□□ -0.2
DEPDC1B-206ENST00000512452 PAX3P23760 479 aa13.82□□□□□ -0.2
DEPDC1B-206ENST00000512452 LRPAP1P30533 357 aa13.82□□□□□ -0.2
DEPDC1B-206ENST00000512452 COILP38432 576 aaPredicted RBP13.82□□□□□ -0.2
DEPDC1B-206ENST00000512452 HSPA9P38646 679 aaKnown RBP13.82□□□□□ -0.2
DEPDC1B-206ENST00000512452 PTGIRP43119 386 aa13.82□□□□□ -0.2
DEPDC1B-206ENST00000512452 GPD2P43304 727 aa13.82□□□□□ -0.2
DEPDC1B-206ENST00000512452 GUCY2FP51841 1108 aa13.82□□□□□ -0.2
DEPDC1B-206ENST00000512452 MGAT3Q09327 533 aa13.82□□□□□ -0.2
DEPDC1B-206ENST00000512452 PDCLQ13371 301 aa13.82□□□□□ -0.2
DEPDC1B-206ENST00000512452 SIX1Q15475 284 aaPredicted RBP13.82□□□□□ -0.2
DEPDC1B-206ENST00000512452 FBXO47Q5MNV8 452 aa13.82□□□□□ -0.2
DEPDC1B-206ENST00000512452 ARHGAP17Q68EM7 881 aa13.82□□□□□ -0.2
DEPDC1B-206ENST00000512452 DUPD1Q68J44 220 aa13.82□□□□□ -0.2
DEPDC1B-206ENST00000512452 CCSAPQ6IQ19 270 aaPredicted RBP13.82□□□□□ -0.2
DEPDC1B-206ENST00000512452 GDF6Q6KF10 455 aaPredicted RBP13.82□□□□□ -0.2
DEPDC1B-206ENST00000512452 MFSD5Q6N075 450 aa13.82□□□□□ -0.2
DEPDC1B-206ENST00000512452 PSRC1Q6PGN9 363 aaPredicted RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms