RNA–Protein interactions for RNA: ENST00000512078.5

DEPDC1B-205, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 1,596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-205ENST00000512078 TMEM206Q9H813 350 aa8.39□□□□□ -1.07
DEPDC1B-205ENST00000512078 GPRC5CQ9NQ84 441 aa8.39□□□□□ -1.07
DEPDC1B-205ENST00000512078 GMIPQ9P107 970 aa8.39□□□□□ -1.07
DEPDC1B-205ENST00000512078 CNTN3Q9P232 1028 aa8.39□□□□□ -1.07
DEPDC1B-205ENST00000512078 BRPF3Q9ULD4 1205 aa8.39□□□□□ -1.07
DEPDC1B-205ENST00000512078 CYP8B1Q9UNU6 501 aa8.39□□□□□ -1.07
DEPDC1B-205ENST00000512078 SRPK3Q9UPE1 567 aa8.39□□□□□ -1.07
DEPDC1B-205ENST00000512078 TIMM13Q9Y5L4 95 aaPredicted RBP8.39□□□□□ -1.07
DEPDC1B-205ENST00000512078 NDUFS2O75306 463 aa8.38□□□□□ -1.07
DEPDC1B-205ENST00000512078 KAT7O95251 611 aa8.38□□□□□ -1.07
DEPDC1B-205ENST00000512078 APODP05090 189 aa8.38□□□□□ -1.07
DEPDC1B-205ENST00000512078 CDK4P11802 303 aa8.38□□□□□ -1.07
DEPDC1B-205ENST00000512078 KRT10P13645 584 aa8.38□□□□□ -1.07
DEPDC1B-205ENST00000512078 HMGA1P17096 107 aaKnown RBP8.38□□□□□ -1.07
DEPDC1B-205ENST00000512078 CR2P20023 1033 aa8.38□□□□□ -1.07
DEPDC1B-205ENST00000512078 MESP2Q0VG99 397 aa8.38□□□□□ -1.07
DEPDC1B-205ENST00000512078 TARDBPQ13148 414 aaKnown RBP eCLIP8.38□□□□□ -1.074e-6■■■■□ 21
DEPDC1B-205ENST00000512078 MGAT5BQ3V5L5 792 aa8.38□□□□□ -1.07
DEPDC1B-205ENST00000512078 ATF7IP2Q5U623 682 aa8.38□□□□□ -1.07
DEPDC1B-205ENST00000512078 EMC10Q5UCC4 262 aa8.38□□□□□ -1.07
DEPDC1B-205ENST00000512078 USP37Q86T82 979 aa8.38□□□□□ -1.07
DEPDC1B-205ENST00000512078 ACAP3Q96P50 834 aa8.38□□□□□ -1.07
DEPDC1B-205ENST00000512078 PNKPQ96T60 521 aa8.38□□□□□ -1.07
DEPDC1B-205ENST00000512078 LINC00597Q9H2U6 94 aa8.38□□□□□ -1.07
DEPDC1B-205ENST00000512078 ZDHHC4Q9NPG8 344 aa8.38□□□□□ -1.07
DEPDC1B-205ENST00000512078 MYMKA6NI61 221 aa8.37□□□□□ -1.07
DEPDC1B-205ENST00000512078 MEI4A8MW99 385 aa8.37□□□□□ -1.07
DEPDC1B-205ENST00000512078 PRPF3O43395 683 aaKnown RBP8.37□□□□□ -1.07
DEPDC1B-205ENST00000512078 USO1O60763 962 aaKnown RBP8.37□□□□□ -1.07
DEPDC1B-205ENST00000512078 TADA3O75528 432 aa8.37□□□□□ -1.07
DEPDC1B-205ENST00000512078 SLITRK3O94933 977 aa8.37□□□□□ -1.07
DEPDC1B-205ENST00000512078 AFPP02771 609 aaKnown RBP8.37□□□□□ -1.07
DEPDC1B-205ENST00000512078 USP17L7P0C7H9 530 aa8.37□□□□□ -1.07
DEPDC1B-205ENST00000512078 TYMPP19971 482 aa8.37□□□□□ -1.07
DEPDC1B-205ENST00000512078 TNFRSF4P43489 277 aa8.37□□□□□ -1.07
DEPDC1B-205ENST00000512078 CLDN6P56747 220 aa8.37□□□□□ -1.07
DEPDC1B-205ENST00000512078 NFATC3Q12968 1075 aa8.37□□□□□ -1.07
DEPDC1B-205ENST00000512078 NT5DC1Q5TFE4 455 aa8.37□□□□□ -1.07
DEPDC1B-205ENST00000512078 OVOS1Q6IE37 1185 aa8.37□□□□□ -1.07
DEPDC1B-205ENST00000512078 ATG14Q6ZNE5 492 aa8.37□□□□□ -1.07
DEPDC1B-205ENST00000512078 TRMT11Q7Z4G4 463 aaKnown RBP8.37□□□□□ -1.07
DEPDC1B-205ENST00000512078 TPH2Q8IWU9 490 aa8.37□□□□□ -1.07
DEPDC1B-205ENST00000512078 KCNV2Q8TDN2 545 aa8.37□□□□□ -1.07
DEPDC1B-205ENST00000512078 GIPC2Q8TF65 315 aa8.37□□□□□ -1.07
DEPDC1B-205ENST00000512078 CCDC43Q96MW1 224 aaKnown RBP8.37□□□□□ -1.07
DEPDC1B-205ENST00000512078 FTSJ1Q9UET6 329 aa8.37□□□□□ -1.07
DEPDC1B-205ENST00000512078 PAXBP1Q9Y5B6 917 aa8.37□□□□□ -1.07
DEPDC1B-205ENST00000512078 ITPR3Q14573 2671 aa8.37□□□□□ -1.07
DEPDC1B-205ENST00000512078 STK36Q9NRP7 1315 aa8.37□□□□□ -1.07
DEPDC1B-205ENST00000512078 NBASA2RRP1 2371 aa8.37□□□□□ -1.07
DEPDC1B-205ENST00000512078 SCN1AP35498 2009 aa8.36□□□□□ -1.07
DEPDC1B-205ENST00000512078 ARID1BQ8NFD5 2236 aaPredicted RBP8.36□□□□□ -1.07
DEPDC1B-205ENST00000512078 SGSM2O43147 1006 aa8.36□□□□□ -1.07
DEPDC1B-205ENST00000512078 PCDHGA12O60330 932 aa8.36□□□□□ -1.07
DEPDC1B-205ENST00000512078 CYP17A1P05093 508 aa8.36□□□□□ -1.07
DEPDC1B-205ENST00000512078 HOXB2P14652 356 aa8.36□□□□□ -1.07
DEPDC1B-205ENST00000512078 LIG1P18858 919 aa8.36□□□□□ -1.07
DEPDC1B-205ENST00000512078 NDUFV2P19404 249 aa8.36□□□□□ -1.07
DEPDC1B-205ENST00000512078 HSPA4P34932 840 aa8.36□□□□□ -1.07
DEPDC1B-205ENST00000512078 ADD1P35611 737 aaKnown RBP8.36□□□□□ -1.07
DEPDC1B-205ENST00000512078 GRIA2P42262 883 aa8.36□□□□□ -1.07
DEPDC1B-205ENST00000512078 SLC6A11P48066 632 aa8.36□□□□□ -1.07
DEPDC1B-205ENST00000512078 CLCN6P51797 869 aa8.36□□□□□ -1.07
DEPDC1B-205ENST00000512078 PCBP4P57723 403 aaKnown RBP8.36□□□□□ -1.07
DEPDC1B-205ENST00000512078 VAC14Q08AM6 782 aa8.36□□□□□ -1.07
DEPDC1B-205ENST00000512078 HES3Q5TGS1 186 aa8.36□□□□□ -1.07
DEPDC1B-205ENST00000512078 NCAPH2Q6IBW4 605 aa8.36□□□□□ -1.07
DEPDC1B-205ENST00000512078 ARMCX5Q6P1M9 558 aa8.36□□□□□ -1.07
DEPDC1B-205ENST00000512078 MCPH1Q8NEM0 835 aa8.36□□□□□ -1.07
DEPDC1B-205ENST00000512078 SH3RF2Q8TEC5 729 aa8.36□□□□□ -1.07
DEPDC1B-205ENST00000512078 C2orf15Q8WU43 125 aaKnown RBP8.36□□□□□ -1.07
DEPDC1B-205ENST00000512078 BSNDQ8WZ55 320 aa8.36□□□□□ -1.07
DEPDC1B-205ENST00000512078 NACC1Q96RE7 527 aa8.36□□□□□ -1.07
DEPDC1B-205ENST00000512078 SLC22A12Q96S37 553 aa8.36□□□□□ -1.07
DEPDC1B-205ENST00000512078 CDT1Q9H211 546 aa8.36□□□□□ -1.07
DEPDC1B-205ENST00000512078 CD248Q9HCU0 757 aa8.36□□□□□ -1.07
DEPDC1B-205ENST00000512078 CD93Q9NPY3 652 aa8.36□□□□□ -1.07
DEPDC1B-205ENST00000512078 VPS54Q9P1Q0 977 aa8.36□□□□□ -1.07
DEPDC1B-205ENST00000512078 TNFSF13BQ9Y275 285 aa8.36□□□□□ -1.07
DEPDC1B-205ENST00000512078 BOD1L1Q8NFC6 3051 aa8.36□□□□□ -1.07
DEPDC1B-205ENST00000512078 FBN2P35556 2912 aa8.36□□□□□ -1.07
DEPDC1B-205ENST00000512078 TRAV19A0A0A6YYK7 116 aa8.35□□□□□ -1.07
DEPDC1B-205ENST00000512078 CCDC196A0A1B0GTZ2 297 aa8.35□□□□□ -1.07
DEPDC1B-205ENST00000512078 A0A1W2PQF6 199 aa8.35□□□□□ -1.07
DEPDC1B-205ENST00000512078 CLEC18AA5D8T8 446 aa8.35□□□□□ -1.07
DEPDC1B-205ENST00000512078 M0R2N6 131 aa8.35□□□□□ -1.07
DEPDC1B-205ENST00000512078 TRIM66O15016 1216 aa8.35□□□□□ -1.07
DEPDC1B-205ENST00000512078 BCAT2O15382 392 aaPredicted RBP8.35□□□□□ -1.07
DEPDC1B-205ENST00000512078 PAPSS1O43252 624 aaPredicted RBP8.35□□□□□ -1.07
DEPDC1B-205ENST00000512078 RFPL3O75679 317 aa8.35□□□□□ -1.07
DEPDC1B-205ENST00000512078 CKMP06732 381 aa8.35□□□□□ -1.07
DEPDC1B-205ENST00000512078 C1SP09871 688 aa8.35□□□□□ -1.07
DEPDC1B-205ENST00000512078 HAPLN1P10915 354 aaPredicted RBP8.35□□□□□ -1.07
DEPDC1B-205ENST00000512078 CD44P16070 742 aaKnown RBP8.35□□□□□ -1.07
DEPDC1B-205ENST00000512078 CHMLP26374 656 aa8.35□□□□□ -1.07
DEPDC1B-205ENST00000512078 LRPAP1P30533 357 aa8.35□□□□□ -1.07
DEPDC1B-205ENST00000512078 NAMPTP43490 491 aa8.35□□□□□ -1.07
DEPDC1B-205ENST00000512078 OSTNP61366 133 aa8.35□□□□□ -1.07
DEPDC1B-205ENST00000512078 DMP1Q13316 513 aaPredicted RBP8.35□□□□□ -1.07
DEPDC1B-205ENST00000512078 NUMA1Q14980 2115 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms