RNA–Protein interactions for RNA: ENST00000511895.1

LINC01088-208, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 2 BASIC

Gene LINC01088, Length 795 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-208ENST00000511895 KAZNQ674X7 775 aa6.94□□□□□ -1.3
LINC01088-208ENST00000511895 SFRP4Q6FHJ7 346 aaPredicted RBP6.94□□□□□ -1.3
LINC01088-208ENST00000511895 SLC9A6Q92581 669 aa6.94□□□□□ -1.3
LINC01088-208ENST00000511895 NELL2Q99435 816 aa6.94□□□□□ -1.3
LINC01088-208ENST00000511895 PTDSS2Q9BVG9 487 aa6.94□□□□□ -1.3
LINC01088-208ENST00000511895 DPH1Q9BZG8 443 aa6.94□□□□□ -1.3
LINC01088-208ENST00000511895 ZNF518BQ9C0D4 1074 aa6.94□□□□□ -1.3
LINC01088-208ENST00000511895 SMURF2Q9HAU4 748 aa6.94□□□□□ -1.3
LINC01088-208ENST00000511895 STK32BQ9NY57 414 aa6.94□□□□□ -1.3
LINC01088-208ENST00000511895 AFF4Q9UHB7 1163 aaKnown RBP6.94□□□□□ -1.3
LINC01088-208ENST00000511895 SERTAD3Q9UJW9 196 aa6.94□□□□□ -1.3
LINC01088-208ENST00000511895 PAXBP1Q9Y5B6 917 aa6.94□□□□□ -1.3
LINC01088-208ENST00000511895 MPPED1O15442 326 aa6.93□□□□□ -1.3
LINC01088-208ENST00000511895 ORC4O43929 436 aa6.93□□□□□ -1.3
LINC01088-208ENST00000511895 PQBP1O60828 265 aaKnown RBP6.93□□□□□ -1.3
LINC01088-208ENST00000511895 RHOP08100 348 aa6.93□□□□□ -1.3
LINC01088-208ENST00000511895 FMO1Q01740 532 aa6.93□□□□□ -1.3
LINC01088-208ENST00000511895 EIF2B5Q13144 721 aaKnown RBP6.93□□□□□ -1.3
LINC01088-208ENST00000511895 COBLL1Q53SF7 1204 aa6.93□□□□□ -1.3
LINC01088-208ENST00000511895 C3orf38Q5JPI3 329 aa6.93□□□□□ -1.3
LINC01088-208ENST00000511895 ICE2Q659A1 982 aa6.93□□□□□ -1.3
LINC01088-208ENST00000511895 FKBP10Q96AY3 582 aa6.93□□□□□ -1.3
LINC01088-208ENST00000511895 AGAP2Q99490 1192 aa6.93□□□□□ -1.3
LINC01088-208ENST00000511895 GEMIN8Q9NWZ8 242 aaKnown RBP6.93□□□□□ -1.3
LINC01088-208ENST00000511895 SNX13Q9Y5W8 968 aa6.93□□□□□ -1.3
LINC01088-208ENST00000511895 SALL3Q9BXA9 1300 aa6.93□□□□□ -1.3
LINC01088-208ENST00000511895 ZNF335Q9H4Z2 1342 aaPredicted RBP6.93□□□□□ -1.3
LINC01088-208ENST00000511895 UHRF1BP1Q6BDS2 1440 aa6.93□□□□□ -1.3
LINC01088-208ENST00000511895 hCG_1984214I3L0E3 225 aa6.92□□□□□ -1.3
LINC01088-208ENST00000511895 PPM1DO15297 605 aa6.92□□□□□ -1.3
LINC01088-208ENST00000511895 RASSF9O75901 435 aa6.92□□□□□ -1.3
LINC01088-208ENST00000511895 PDHA1P08559 390 aa6.92□□□□□ -1.3
LINC01088-208ENST00000511895 PROZP22891 400 aa6.92□□□□□ -1.3
LINC01088-208ENST00000511895 LRPAP1P30533 357 aa6.92□□□□□ -1.3
LINC01088-208ENST00000511895 WNT3P56703 355 aa6.92□□□□□ -1.3
LINC01088-208ENST00000511895 E2F2Q14209 437 aa6.92□□□□□ -1.3
LINC01088-208ENST00000511895 MGAT5BQ3V5L5 792 aa6.92□□□□□ -1.3
LINC01088-208ENST00000511895 PLA1AQ53H76 456 aa6.92□□□□□ -1.3
LINC01088-208ENST00000511895 DCAF12L1Q5VU92 463 aa6.92□□□□□ -1.3
LINC01088-208ENST00000511895 RGS7BPQ6MZT1 257 aaPredicted RBP6.92□□□□□ -1.3
LINC01088-208ENST00000511895 KSR2Q6VAB6 950 aa6.92□□□□□ -1.3
LINC01088-208ENST00000511895 MAML1Q92585 1016 aa6.92□□□□□ -1.3
LINC01088-208ENST00000511895 KRTAP4-11Q9BYQ6 195 aa6.92□□□□□ -1.3
LINC01088-208ENST00000511895 NUP62CLQ9H1M0 184 aa6.92□□□□□ -1.3
LINC01088-208ENST00000511895 A1CFQ9NQ94 594 aaKnown RBP6.92□□□□□ -1.3
LINC01088-208ENST00000511895 MRPS17Q9Y2R5 130 aaKnown RBP6.92□□□□□ -1.3
LINC01088-208ENST00000511895 FER1L4A9Z1Z3 1794 aa6.92□□□□□ -1.3
LINC01088-208ENST00000511895 CD109Q6YHK3 1445 aa6.92□□□□□ -1.3
LINC01088-208ENST00000511895 ABCA10Q8WWZ4 1543 aa6.91□□□□□ -1.3
LINC01088-208ENST00000511895 SETD1BQ9UPS6 1966 aaKnown RBP6.91□□□□□ -1.3
LINC01088-208ENST00000511895 TRIM43BA6NCK2 446 aa6.91□□□□□ -1.3
LINC01088-208ENST00000511895 PPIFP30405 207 aaKnown RBP6.91□□□□□ -1.3
LINC01088-208ENST00000511895 ZNF169Q14929 603 aaPredicted RBP6.91□□□□□ -1.3
LINC01088-208ENST00000511895 PTPRRQ15256 657 aa6.91□□□□□ -1.3
LINC01088-208ENST00000511895 TBCCQ15814 346 aa6.91□□□□□ -1.3
LINC01088-208ENST00000511895 TXNRD1Q16881 649 aa6.91□□□□□ -1.3
LINC01088-208ENST00000511895 NBPF8Q3BBV2 869 aa6.91□□□□□ -1.3
LINC01088-208ENST00000511895 OLFML1Q6UWY5 402 aa6.91□□□□□ -1.3
LINC01088-208ENST00000511895 ZNF280BQ86YH2 543 aa6.91□□□□□ -1.3
LINC01088-208ENST00000511895 TRIM43Q96BQ3 446 aaPredicted RBP6.91□□□□□ -1.3
LINC01088-208ENST00000511895 MESP1Q9BRJ9 268 aa6.91□□□□□ -1.3
LINC01088-208ENST00000511895 STK31Q9BXU1 1019 aa6.91□□□□□ -1.3
LINC01088-208ENST00000511895 KLC4Q9NSK0 619 aa6.91□□□□□ -1.3
LINC01088-208ENST00000511895 NDRG4Q9ULP0 352 aaKnown RBP6.91□□□□□ -1.3
LINC01088-208ENST00000511895 ADGRA2Q96PE1 1338 aa6.91□□□□□ -1.3
LINC01088-208ENST00000511895 PTPRGP23470 1445 aa6.91□□□□□ -1.3
LINC01088-208ENST00000511895 UHRF1BP1LA0JNW5 1464 aa6.91□□□□□ -1.3
LINC01088-208ENST00000511895 KIAA0556O60303 1618 aa6.9□□□□□ -1.3
LINC01088-208ENST00000511895 ADM5C9JUS6 153 aa6.9□□□□□ -1.3
LINC01088-208ENST00000511895 PYCARD-AS1I3L0S3 204 aa6.9□□□□□ -1.3
LINC01088-208ENST00000511895 GNALP38405 381 aa6.9□□□□□ -1.3
LINC01088-208ENST00000511895 PRKAG1P54619 331 aa6.9□□□□□ -1.3
LINC01088-208ENST00000511895 RPS16P62249 146 aaKnown RBP6.9□□□□□ -1.3
LINC01088-208ENST00000511895 PCSK4Q6UW60 755 aa6.9□□□□□ -1.3
LINC01088-208ENST00000511895 PEG10Q86TG7 708 aaKnown RBP6.9□□□□□ -1.3
LINC01088-208ENST00000511895 SLC15A3Q8IY34 581 aa6.9□□□□□ -1.3
LINC01088-208ENST00000511895 FAM109AQ8N4B1 249 aa6.9□□□□□ -1.3
LINC01088-208ENST00000511895 OR56A3Q8NH54 315 aa6.9□□□□□ -1.3
LINC01088-208ENST00000511895 SPSB4Q96A44 273 aa6.9□□□□□ -1.3
LINC01088-208ENST00000511895 NMD3Q96D46 503 aaKnown RBP6.9□□□□□ -1.3
LINC01088-208ENST00000511895 ALG8Q9BVK2 526 aa6.9□□□□□ -1.3
LINC01088-208ENST00000511895 SARGQ9BW04 601 aa6.9□□□□□ -1.3
LINC01088-208ENST00000511895 DDX21Q9NR30 783 aaKnown RBP eCLIP6.9□□□□□ -1.3
LINC01088-208ENST00000511895 ZNHIT2Q9UHR6 403 aa6.9□□□□□ -1.3
LINC01088-208ENST00000511895 HDAC9Q9UKV0 1011 aa6.9□□□□□ -1.3
LINC01088-208ENST00000511895 CORO2BQ9UQ03 480 aa6.9□□□□□ -1.3
LINC01088-208ENST00000511895 TBC1D30Q9Y2I9 924 aa6.9□□□□□ -1.3
LINC01088-208ENST00000511895 NCOA1Q15788 1441 aa6.9□□□□□ -1.31
LINC01088-208ENST00000511895 POGZQ7Z3K3 1410 aa6.9□□□□□ -1.31
LINC01088-208ENST00000511895 CCDC151A5D8V7 595 aa6.89□□□□□ -1.31
LINC01088-208ENST00000511895 KIAA0355O15063 1070 aa6.89□□□□□ -1.31
LINC01088-208ENST00000511895 PRC1O43663 620 aa6.89□□□□□ -1.31
LINC01088-208ENST00000511895 CAND2O75155 1236 aa6.89□□□□□ -1.31
LINC01088-208ENST00000511895 KRT18P05783 430 aaKnown RBP6.89□□□□□ -1.31
LINC01088-208ENST00000511895 NR2F6P10588 404 aa6.89□□□□□ -1.31
LINC01088-208ENST00000511895 TYRP1P17643 537 aa6.89□□□□□ -1.31
LINC01088-208ENST00000511895 MAPK10P53779 464 aa6.89□□□□□ -1.31
LINC01088-208ENST00000511895 SIM1P81133 766 aaPredicted RBP6.89□□□□□ -1.31
LINC01088-208ENST00000511895 MYO1EQ12965 1108 aa6.89□□□□□ -1.31
LINC01088-208ENST00000511895 HLTFQ14527 1009 aaKnown RBP eCLIP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms