RNA–Protein interactions for RNA: ENST00000510171.3

DDX41-211, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-211ENST00000510171 SH3PXD2AQ5TCZ1 1133 aa11.16□□□□□ -0.62
DDX41-211ENST00000510171 PMS2CLQ68D20 193 aa11.16□□□□□ -0.62
DDX41-211ENST00000510171 SCARA3Q6AZY7 606 aa11.16□□□□□ -0.62
DDX41-211ENST00000510171 OSTM1Q86WC4 334 aa11.16□□□□□ -0.62
DDX41-211ENST00000510171 BRSK2Q8IWQ3 736 aa11.16□□□□□ -0.62
DDX41-211ENST00000510171 ADGRF2Q8IZF7 708 aa11.16□□□□□ -0.62
DDX41-211ENST00000510171 TOP6BLQ8N6T0 577 aa11.16□□□□□ -0.62
DDX41-211ENST00000510171 SAAL1Q96ER3 474 aa11.16□□□□□ -0.62
DDX41-211ENST00000510171 TPSD1Q9BZJ3 242 aa11.16□□□□□ -0.62
DDX41-211ENST00000510171 TBC1D7Q9P0N9 293 aa11.16□□□□□ -0.62
DDX41-211ENST00000510171 MAGEC2Q9UBF1 373 aaPredicted RBP11.16□□□□□ -0.62
DDX41-211ENST00000510171 SEL1LQ9UBV2 794 aa11.16□□□□□ -0.62
DDX41-211ENST00000510171 CCDC39Q9UFE4 941 aa11.16□□□□□ -0.62
DDX41-211ENST00000510171 R3HCC1Q9Y3T6 440 aaKnown RBP11.16□□□□□ -0.62
DDX41-211ENST00000510171 PCDHB13Q9Y5F0 798 aa11.16□□□□□ -0.62
DDX41-211ENST00000510171 CITO14578 2027 aa11.16□□□□□ -0.62
DDX41-211ENST00000510171 MYMKA6NI61 221 aa11.15□□□□□ -0.62
DDX41-211ENST00000510171 C1QTNF9BB2RNN3 333 aa11.15□□□□□ -0.62
DDX41-211ENST00000510171 K7EQS6 105 aa11.15□□□□□ -0.62
DDX41-211ENST00000510171 ALDH1A2O94788 518 aa11.15□□□□□ -0.62
DDX41-211ENST00000510171 GCNT3O95395 438 aa11.15□□□□□ -0.62
DDX41-211ENST00000510171 C1QTNF9P0C862 333 aa11.15□□□□□ -0.62
DDX41-211ENST00000510171 CEACAM1P13688 526 aa11.15□□□□□ -0.62
DDX41-211ENST00000510171 GAP43P17677 238 aa11.15□□□□□ -0.62
DDX41-211ENST00000510171 PFKLP17858 780 aa11.15□□□□□ -0.62
DDX41-211ENST00000510171 CSRP1P21291 193 aaKnown RBP11.15□□□□□ -0.62
DDX41-211ENST00000510171 GARTP22102 1010 aa11.15□□□□□ -0.62
DDX41-211ENST00000510171 IRX4P78413 519 aa11.15□□□□□ -0.62
DDX41-211ENST00000510171 ZNF252P-AS1Q0IIN9 211 aa11.15□□□□□ -0.62
DDX41-211ENST00000510171 SF3A1Q15459 793 aaKnown RBP11.15□□□□□ -0.62
DDX41-211ENST00000510171 CCDC142Q17RM4 750 aa11.15□□□□□ -0.62
DDX41-211ENST00000510171 SOWAHAQ2M3V2 549 aa11.15□□□□□ -0.62
DDX41-211ENST00000510171 RRAGBQ5VZM2 374 aa11.15□□□□□ -0.62
DDX41-211ENST00000510171 ANO7Q6IWH7 933 aa11.15□□□□□ -0.62
DDX41-211ENST00000510171 FAM171BQ6P995 826 aa11.15□□□□□ -0.62
DDX41-211ENST00000510171 UNQ6494/PRO21346Q6UXR6 183 aa11.15□□□□□ -0.62
DDX41-211ENST00000510171 C4orf50Q6ZRC1 276 aa11.15□□□□□ -0.62
DDX41-211ENST00000510171 DPH6Q7L8W6 267 aa11.15□□□□□ -0.62
DDX41-211ENST00000510171 CYP2U1Q7Z449 544 aa11.15□□□□□ -0.62
DDX41-211ENST00000510171 RASSF3Q86WH2 238 aa11.15□□□□□ -0.62
DDX41-211ENST00000510171 TTC30AQ86WT1 665 aa11.15□□□□□ -0.62
DDX41-211ENST00000510171 SYCP3Q8IZU3 236 aa11.15□□□□□ -0.62
DDX41-211ENST00000510171 CCDC33Q8N5R6 958 aa11.15□□□□□ -0.62
DDX41-211ENST00000510171 ZSWIM2Q8NEG5 633 aa11.15□□□□□ -0.62
DDX41-211ENST00000510171 CXorf38Q8TB03 319 aa11.15□□□□□ -0.62
DDX41-211ENST00000510171 PIGKQ92643 395 aa11.15□□□□□ -0.62
DDX41-211ENST00000510171 EPSTI1Q96J88 318 aa11.15□□□□□ -0.62
DDX41-211ENST00000510171 SPATA17Q96L03 361 aa11.15□□□□□ -0.62
DDX41-211ENST00000510171 CNOT6LQ96LI5 555 aaKnown RBP11.15□□□□□ -0.62
DDX41-211ENST00000510171 TMEM9BQ9NQ34 198 aa11.15□□□□□ -0.62
DDX41-211ENST00000510171 TRPM5Q9NZQ8 1165 aa11.15□□□□□ -0.62
DDX41-211ENST00000510171 STK17AQ9UEE5 414 aa11.15□□□□□ -0.62
DDX41-211ENST00000510171 RALYQ9UKM9 306 aaKnown RBP11.15□□□□□ -0.62
DDX41-211ENST00000510171 CDH9Q9ULB4 789 aa11.15□□□□□ -0.62
DDX41-211ENST00000510171 ZMIZ1Q9ULJ6 1067 aa11.15□□□□□ -0.62
DDX41-211ENST00000510171 MMP17Q9ULZ9 603 aa11.15□□□□□ -0.62
DDX41-211ENST00000510171 GOLGA8IPA6NC78 632 aa11.14□□□□□ -0.63
DDX41-211ENST00000510171 GOLGA8JA6NMD2 632 aa11.14□□□□□ -0.63
DDX41-211ENST00000510171 LEFTY2O00292 366 aa11.14□□□□□ -0.63
DDX41-211ENST00000510171 CDX4O14627 284 aaPredicted RBP11.14□□□□□ -0.63
DDX41-211ENST00000510171 HCRTO43612 131 aa11.14□□□□□ -0.63
DDX41-211ENST00000510171 ATP2C2O75185 946 aa11.14□□□□□ -0.63
DDX41-211ENST00000510171 TMEM191BP0C7N4 346 aa11.14□□□□□ -0.63
DDX41-211ENST00000510171 BCKDHBP21953 392 aa11.14□□□□□ -0.63
DDX41-211ENST00000510171 GRIK1P39086 918 aa11.14□□□□□ -0.63
DDX41-211ENST00000510171 OPRD1P41143 372 aa11.14□□□□□ -0.63
DDX41-211ENST00000510171 DHPSP49366 369 aaPredicted RBP11.14□□□□□ -0.63
DDX41-211ENST00000510171 MRPS21P82921 87 aaKnown RBP11.14□□□□□ -0.63
DDX41-211ENST00000510171 ZXDBP98169 803 aa11.14□□□□□ -0.63
DDX41-211ENST00000510171 MYO1EQ12965 1108 aa11.14□□□□□ -0.63
DDX41-211ENST00000510171 MAPRE1Q15691 268 aaKnown RBP11.14□□□□□ -0.63
DDX41-211ENST00000510171 CRY1Q16526 586 aa11.14□□□□□ -0.63
DDX41-211ENST00000510171 VSTM1Q6UX27 236 aa11.14□□□□□ -0.63
DDX41-211ENST00000510171 USP49Q70CQ1 688 aa11.14□□□□□ -0.63
DDX41-211ENST00000510171 SV2BQ7L1I2 683 aa11.14□□□□□ -0.63
DDX41-211ENST00000510171 ADGRG2Q8IZP9 1017 aa11.14□□□□□ -0.63
DDX41-211ENST00000510171 KIAA1958Q8N8K9 716 aa11.14□□□□□ -0.63
DDX41-211ENST00000510171 KDF1Q8NAX2 398 aaPredicted RBP11.14□□□□□ -0.63
DDX41-211ENST00000510171 NOC3LQ8WTT2 800 aaKnown RBP11.14□□□□□ -0.63
DDX41-211ENST00000510171 HPDLQ96IR7 371 aa11.14□□□□□ -0.63
DDX41-211ENST00000510171 CEP295NLQ96MC4 621 aa11.14□□□□□ -0.63
DDX41-211ENST00000510171 MTMR12Q9C0I1 747 aa11.14□□□□□ -0.63
DDX41-211ENST00000510171 PDE11AQ9HCR9 933 aa11.14□□□□□ -0.63
DDX41-211ENST00000510171 EHD2Q9NZN4 543 aa11.14□□□□□ -0.63
DDX41-211ENST00000510171 SIX4Q9UIU6 781 aa11.14□□□□□ -0.63
DDX41-211ENST00000510171 ZNF840PA6NDX5 716 aa11.13□□□□□ -0.63
DDX41-211ENST00000510171 ANTXRLA6NF34 631 aa11.13□□□□□ -0.63
DDX41-211ENST00000510171 PATE3B3GLJ2 98 aa11.13□□□□□ -0.63
DDX41-211ENST00000510171 SLC9A3R1O14745 358 aaPredicted RBP11.13□□□□□ -0.63
DDX41-211ENST00000510171 MAP3K13O43283 966 aa11.13□□□□□ -0.63
DDX41-211ENST00000510171 PDGFRBP09619 1106 aa11.13□□□□□ -0.63
DDX41-211ENST00000510171 IDEP14735 1019 aa11.13□□□□□ -0.63
DDX41-211ENST00000510171 SPINK2P20155 84 aa11.13□□□□□ -0.63
DDX41-211ENST00000510171 BDNFP23560 247 aa11.13□□□□□ -0.63
DDX41-211ENST00000510171 LMO2P25791 158 aa11.13□□□□□ -0.63
DDX41-211ENST00000510171 ANXA13P27216 316 aa11.13□□□□□ -0.63
DDX41-211ENST00000510171 PPP3CCP48454 512 aa11.13□□□□□ -0.63
DDX41-211ENST00000510171 CYP27A1Q02318 531 aa11.13□□□□□ -0.63
DDX41-211ENST00000510171 LMAN2Q12907 356 aa11.13□□□□□ -0.63
DDX41-211ENST00000510171 CUL4AQ13619 759 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms