RNA–Protein interactions for RNA: ENST00000509857.5

TRAPPC11-206, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-206ENST00000509857 TMPRSS5Q9H3S3 457 aa8.42□□□□□ -1.06
TRAPPC11-206ENST00000509857 ATP6V0A4Q9HBG4 840 aa8.42□□□□□ -1.06
TRAPPC11-206ENST00000509857 PRDM11Q9NQV5 511 aa8.42□□□□□ -1.06
TRAPPC11-206ENST00000509857 SYBUQ9NX95 663 aa8.42□□□□□ -1.06
TRAPPC11-206ENST00000509857 STAP2Q9UGK3 403 aa8.42□□□□□ -1.06
TRAPPC11-206ENST00000509857 SRRDQ9UH36 339 aa8.42□□□□□ -1.06
TRAPPC11-206ENST00000509857 CPA4Q9UI42 421 aa8.42□□□□□ -1.06
TRAPPC11-206ENST00000509857 PLEKHG1Q9ULL1 1385 aa8.42□□□□□ -1.06
TRAPPC11-206ENST00000509857 SLIT1O75093 1534 aa8.42□□□□□ -1.06
TRAPPC11-206ENST00000509857 ADGRB2O60241 1585 aa8.42□□□□□ -1.06
TRAPPC11-206ENST00000509857 DIP2AQ14689 1571 aa8.42□□□□□ -1.06
TRAPPC11-206ENST00000509857 CDC42BPGQ6DT37 1551 aa8.41□□□□□ -1.06
TRAPPC11-206ENST00000509857 ARHGAP23Q9P227 1491 aa8.41□□□□□ -1.06
TRAPPC11-206ENST00000509857 A0A1W2PP64 1363 aa8.41□□□□□ -1.06
TRAPPC11-206ENST00000509857 POLRMTO00411 1230 aaKnown RBP8.41□□□□□ -1.06
TRAPPC11-206ENST00000509857 DNAJB5O75953 348 aa8.41□□□□□ -1.06
TRAPPC11-206ENST00000509857 HMGB1P09429 215 aaKnown RBP8.41□□□□□ -1.06
TRAPPC11-206ENST00000509857 PIM1P11309 404 aaPredicted RBP8.41□□□□□ -1.06
TRAPPC11-206ENST00000509857 NPR1P16066 1061 aa8.41□□□□□ -1.06
TRAPPC11-206ENST00000509857 FDXRP22570 491 aa8.41□□□□□ -1.06
TRAPPC11-206ENST00000509857 ARFIP2P53365 341 aa8.41□□□□□ -1.06
TRAPPC11-206ENST00000509857 USP14P54578 494 aa8.41□□□□□ -1.06
TRAPPC11-206ENST00000509857 MC2RQ01718 297 aa8.41□□□□□ -1.06
TRAPPC11-206ENST00000509857 DYRK1AQ13627 763 aa8.41□□□□□ -1.06
TRAPPC11-206ENST00000509857 SWSAP1Q6NVH7 229 aa8.41□□□□□ -1.06
TRAPPC11-206ENST00000509857 Q6YL49 198 aa8.41□□□□□ -1.06
TRAPPC11-206ENST00000509857 LDLRAD3Q86YD5 345 aa8.41□□□□□ -1.06
TRAPPC11-206ENST00000509857 KBTBD7Q8WVZ9 684 aa8.41□□□□□ -1.06
TRAPPC11-206ENST00000509857 C8orf48Q96LL4 319 aa8.41□□□□□ -1.06
TRAPPC11-206ENST00000509857 COQ10AQ96MF6 247 aa8.41□□□□□ -1.06
TRAPPC11-206ENST00000509857 PRAM1Q96QH2 718 aa8.41□□□□□ -1.06
TRAPPC11-206ENST00000509857 PNNQ9H307 717 aaKnown RBP8.41□□□□□ -1.06
TRAPPC11-206ENST00000509857 ZMAT3Q9HA38 289 aaKnown RBP8.41□□□□□ -1.06
TRAPPC11-206ENST00000509857 PIH1D1Q9NWS0 290 aaKnown RBP8.41□□□□□ -1.06
TRAPPC11-206ENST00000509857 ING1Q9UK53 422 aaPredicted RBP8.41□□□□□ -1.06
TRAPPC11-206ENST00000509857 SHPRHQ149N8 1683 aa8.4□□□□□ -1.06
TRAPPC11-206ENST00000509857 CD163L1Q9NR16 1453 aa8.4□□□□□ -1.06
TRAPPC11-206ENST00000509857 PLEKHH1Q9ULM0 1364 aa8.4□□□□□ -1.06
TRAPPC11-206ENST00000509857 PHGDHO43175 533 aaKnown RBP8.4□□□□□ -1.06
TRAPPC11-206ENST00000509857 FRS3O43559 492 aa8.4□□□□□ -1.06
TRAPPC11-206ENST00000509857 ZBED1O96006 694 aa8.4□□□□□ -1.06
TRAPPC11-206ENST00000509857 SLPIP03973 132 aa8.4□□□□□ -1.06
TRAPPC11-206ENST00000509857 RPS7P62081 194 aaKnown RBP8.4□□□□□ -1.06
TRAPPC11-206ENST00000509857 HLXQ14774 488 aaPredicted RBP8.4□□□□□ -1.06
TRAPPC11-206ENST00000509857 VRK3Q8IV63 474 aa8.4□□□□□ -1.06
TRAPPC11-206ENST00000509857 ADGRG5Q8IZF4 528 aa8.4□□□□□ -1.06
TRAPPC11-206ENST00000509857 NSUN7Q8NE18 718 aaKnown RBP8.4□□□□□ -1.06
TRAPPC11-206ENST00000509857 LINC00476Q8WZB0 136 aa8.4□□□□□ -1.06
TRAPPC11-206ENST00000509857 KRTAP4-11Q9BYQ6 195 aa8.4□□□□□ -1.06
TRAPPC11-206ENST00000509857 MRPS18AQ9NVS2 196 aaKnown RBP8.4□□□□□ -1.06
TRAPPC11-206ENST00000509857 NKTRP30414 1462 aaKnown RBP8.39□□□□□ -1.07
TRAPPC11-206ENST00000509857 IQSEC2Q5JU85 1478 aa8.39□□□□□ -1.07
TRAPPC11-206ENST00000509857 CPSF1Q10570 1443 aaKnown RBP8.39□□□□□ -1.07
TRAPPC11-206ENST00000509857 EDC4Q6P2E9 1401 aaKnown RBP8.39□□□□□ -1.07
TRAPPC11-206ENST00000509857 PNPLA6Q8IY17 1366 aa8.39□□□□□ -1.07
TRAPPC11-206ENST00000509857 SPATA31A3Q5VYP0 1347 aa8.39□□□□□ -1.07
TRAPPC11-206ENST00000509857 A0A1W2PPL8 197 aa8.39□□□□□ -1.07
TRAPPC11-206ENST00000509857 TMEM191CA6NGB0 347 aa8.39□□□□□ -1.07
TRAPPC11-206ENST00000509857 KIF20AO95235 890 aa8.39□□□□□ -1.07
TRAPPC11-206ENST00000509857 TOB1P50616 345 aaPredicted RBP8.39□□□□□ -1.07
TRAPPC11-206ENST00000509857 FHL2Q14192 279 aa8.39□□□□□ -1.07
TRAPPC11-206ENST00000509857 GALEQ14376 348 aa8.39□□□□□ -1.07
TRAPPC11-206ENST00000509857 FAM160B1Q5W0V3 765 aa8.39□□□□□ -1.07
TRAPPC11-206ENST00000509857 COL23A1Q86Y22 540 aaPredicted RBP8.39□□□□□ -1.07
TRAPPC11-206ENST00000509857 WDR63Q8IWG1 891 aa8.39□□□□□ -1.07
TRAPPC11-206ENST00000509857 LNX2Q8N448 690 aa8.39□□□□□ -1.07
TRAPPC11-206ENST00000509857 TRIM54Q9BYV2 358 aa8.39□□□□□ -1.07
TRAPPC11-206ENST00000509857 C22orf23Q9BZE7 217 aa8.39□□□□□ -1.07
TRAPPC11-206ENST00000509857 DPH1Q9BZG8 443 aa8.39□□□□□ -1.07
TRAPPC11-206ENST00000509857 TBCCD1Q9NVR7 557 aa8.39□□□□□ -1.07
TRAPPC11-206ENST00000509857 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.39□□□□□ -1.07
TRAPPC11-206ENST00000509857 COL4A3Q01955 1670 aa8.39□□□□□ -1.07
TRAPPC11-206ENST00000509857 KIF20BQ96Q89 1820 aa8.38□□□□□ -1.07
TRAPPC11-206ENST00000509857 PIK3R4Q99570 1358 aa8.38□□□□□ -1.07
TRAPPC11-206ENST00000509857 TRGV11A0A075B6L2 103 aa8.38□□□□□ -1.07
TRAPPC11-206ENST00000509857 M0QYG6 137 aa8.38□□□□□ -1.07
TRAPPC11-206ENST00000509857 TOR1BO14657 336 aa8.38□□□□□ -1.07
TRAPPC11-206ENST00000509857 SOAT2O75908 522 aa8.38□□□□□ -1.07
TRAPPC11-206ENST00000509857 ITGAMP11215 1152 aa8.38□□□□□ -1.07
TRAPPC11-206ENST00000509857 DPTQ07507 201 aa8.38□□□□□ -1.07
TRAPPC11-206ENST00000509857 CNN3Q15417 329 aaKnown RBP8.38□□□□□ -1.07
TRAPPC11-206ENST00000509857 PCSK4Q6UW60 755 aa8.38□□□□□ -1.07
TRAPPC11-206ENST00000509857 MICALCLQ6ZW33 695 aa8.38□□□□□ -1.07
TRAPPC11-206ENST00000509857 DGKHQ86XP1 1220 aa8.38□□□□□ -1.07
TRAPPC11-206ENST00000509857 PSD4Q8NDX1 1056 aa8.38□□□□□ -1.07
TRAPPC11-206ENST00000509857 IL31RAQ8NI17 732 aa8.38□□□□□ -1.07
TRAPPC11-206ENST00000509857 ANKS1AQ92625 1134 aa8.38□□□□□ -1.07
TRAPPC11-206ENST00000509857 TMEM125Q96AQ2 219 aa8.38□□□□□ -1.07
TRAPPC11-206ENST00000509857 CDK19Q9BWU1 502 aa8.38□□□□□ -1.07
TRAPPC11-206ENST00000509857 INTS13Q9NVM9 706 aa8.38□□□□□ -1.07
TRAPPC11-206ENST00000509857 PLEKHM1Q9Y4G2 1056 aa8.38□□□□□ -1.07
TRAPPC11-206ENST00000509857 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.38□□□□□ -1.07
TRAPPC11-206ENST00000509857 PTCH1Q13635 1447 aa8.37□□□□□ -1.07
TRAPPC11-206ENST00000509857 ADAMTS13Q76LX8 1427 aa8.37□□□□□ -1.07
TRAPPC11-206ENST00000509857 MAST3O60307 1309 aa8.37□□□□□ -1.07
TRAPPC11-206ENST00000509857 FRMPD2Q68DX3 1309 aaPredicted RBP8.37□□□□□ -1.07
TRAPPC11-206ENST00000509857 TPP1O14773 563 aa8.37□□□□□ -1.07
TRAPPC11-206ENST00000509857 FOXN1O15353 648 aa8.37□□□□□ -1.07
TRAPPC11-206ENST00000509857 THP07101 528 aa8.37□□□□□ -1.07
TRAPPC11-206ENST00000509857 HKR1P10072 659 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms