RNA–Protein interactions for RNA: ENST00000508952.5

PACRGL-220, Transcript of parkin coregulated like, humanhuman

TSL 1 (best)

Gene PACRGL, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-220ENST00000508952 PLCB2Q00722 1185 aa23.58■■□□□ 1.37
PACRGL-220ENST00000508952 MAPRE1Q15691 268 aaKnown RBP23.58■■□□□ 1.37
PACRGL-220ENST00000508952 ZNF528Q3MIS6 628 aa23.58■■□□□ 1.37
PACRGL-220ENST00000508952 TXNDC11Q6PKC3 985 aa23.58■■□□□ 1.37
PACRGL-220ENST00000508952 SLC9A9Q8IVB4 645 aa23.58■■□□□ 1.37
PACRGL-220ENST00000508952 MYCBPAPQ8TBZ2 947 aa23.58■■□□□ 1.37
PACRGL-220ENST00000508952 PCED1BQ96HM7 432 aa23.58■■□□□ 1.37
PACRGL-220ENST00000508952 SEMA4AQ9H3S1 761 aa23.58■■□□□ 1.37
PACRGL-220ENST00000508952 DPEP3Q9H4B8 488 aa23.58■■□□□ 1.37
PACRGL-220ENST00000508952 TRPC7Q9HCX4 862 aa23.58■■□□□ 1.37
PACRGL-220ENST00000508952 TDP1Q9NUW8 608 aa23.58■■□□□ 1.37
PACRGL-220ENST00000508952 THG1LQ9NWX6 298 aaKnown RBP23.58■■□□□ 1.37
PACRGL-220ENST00000508952 STAU1O95793 577 aaKnown RBP23.57■■□□□ 1.36
PACRGL-220ENST00000508952 CHRNB1P11230 501 aa23.57■■□□□ 1.36
PACRGL-220ENST00000508952 ATICP31939 592 aa23.57■■□□□ 1.36
PACRGL-220ENST00000508952 CTHP32929 405 aa23.57■■□□□ 1.36
PACRGL-220ENST00000508952 GRIK1P39086 918 aa23.57■■□□□ 1.36
PACRGL-220ENST00000508952 DLG4P78352 724 aa23.57■■□□□ 1.36
PACRGL-220ENST00000508952 WDR44Q5JSH3 913 aa23.57■■□□□ 1.36
PACRGL-220ENST00000508952 VSTM1Q6UX27 236 aa23.57■■□□□ 1.36
PACRGL-220ENST00000508952 RIN3Q8TB24 985 aa23.57■■□□□ 1.36
PACRGL-220ENST00000508952 SYAP1Q96A49 352 aaPredicted RBP23.57■■□□□ 1.36
PACRGL-220ENST00000508952 PRMT8Q9NR22 394 aaPredicted RBP23.57■■□□□ 1.36
PACRGL-220ENST00000508952 GKN1Q9NS71 199 aa23.57■■□□□ 1.36
PACRGL-220ENST00000508952 RBM12Q9NTZ6 932 aaKnown RBP23.57■■□□□ 1.36
PACRGL-220ENST00000508952 EP300Q09472 2414 aaPredicted RBP23.57■■□□□ 1.36
PACRGL-220ENST00000508952 A0A1W2PQ27 194 aa23.56■■□□□ 1.36
PACRGL-220ENST00000508952 A0A1W2PQ64 194 aa23.56■■□□□ 1.36
PACRGL-220ENST00000508952 A0A1W2PQD8 194 aa23.56■■□□□ 1.36
PACRGL-220ENST00000508952 CLDN10P78369 228 aa23.56■■□□□ 1.36
PACRGL-220ENST00000508952 DPYDQ12882 1025 aa23.56■■□□□ 1.36
PACRGL-220ENST00000508952 KRBA2Q6ZNG9 492 aa23.56■■□□□ 1.36
PACRGL-220ENST00000508952 RALGPS2Q86X27 583 aaPredicted RBP23.56■■□□□ 1.36
PACRGL-220ENST00000508952 MSANTD3Q96H12 275 aa23.56■■□□□ 1.36
PACRGL-220ENST00000508952 SLC22A12Q96S37 553 aa23.56■■□□□ 1.36
PACRGL-220ENST00000508952 CYP2S1Q96SQ9 504 aa23.56■■□□□ 1.36
PACRGL-220ENST00000508952 SMYD3Q9H7B4 428 aa23.56■■□□□ 1.36
PACRGL-220ENST00000508952 SPTBN4Q9H254 2564 aa23.56■■□□□ 1.36
PACRGL-220ENST00000508952 SOBPA7XYQ1 873 aa23.55■■□□□ 1.36
PACRGL-220ENST00000508952 A8MXQ7 604 aa23.55■■□□□ 1.36
PACRGL-220ENST00000508952 RHOBTB3O94955 611 aa23.55■■□□□ 1.36
PACRGL-220ENST00000508952 VNN1O95497 513 aa23.55■■□□□ 1.36
PACRGL-220ENST00000508952 C4BPAP04003 597 aaKnown RBP23.55■■□□□ 1.36
PACRGL-220ENST00000508952 PTPN1P18031 435 aaKnown RBP23.55■■□□□ 1.36
PACRGL-220ENST00000508952 RAP1GAPP47736 663 aa23.55■■□□□ 1.36
PACRGL-220ENST00000508952 USP46P62068 366 aa23.55■■□□□ 1.36
PACRGL-220ENST00000508952 NCOA4Q13772 614 aa23.55■■□□□ 1.36
PACRGL-220ENST00000508952 PON2Q15165 354 aa23.55■■□□□ 1.36
PACRGL-220ENST00000508952 ZNF699Q32M78 642 aa23.55■■□□□ 1.36
PACRGL-220ENST00000508952 ITPRIPL2Q3MIP1 535 aa23.55■■□□□ 1.36
PACRGL-220ENST00000508952 CEP135Q66GS9 1140 aa23.55■■□□□ 1.36
PACRGL-220ENST00000508952 TRIM68Q6AZZ1 485 aa23.55■■□□□ 1.36
PACRGL-220ENST00000508952 C1orf228Q6PIY5 440 aa23.55■■□□□ 1.36
PACRGL-220ENST00000508952 SCARA5Q6ZMJ2 495 aa23.55■■□□□ 1.36
PACRGL-220ENST00000508952 TTC16Q8NEE8 873 aa23.55■■□□□ 1.36
PACRGL-220ENST00000508952 TMEM174Q8WUU8 243 aa23.55■■□□□ 1.36
PACRGL-220ENST00000508952 CCDC47Q96A33 483 aaKnown RBP23.55■■□□□ 1.36
PACRGL-220ENST00000508952 SPATA17Q96L03 361 aa23.55■■□□□ 1.36
PACRGL-220ENST00000508952 FAM83CQ9BQN1 747 aa23.55■■□□□ 1.36
PACRGL-220ENST00000508952 KIF9Q9HAQ2 790 aa23.55■■□□□ 1.36
PACRGL-220ENST00000508952 MAPK8IP1Q9UQF2 711 aa23.55■■□□□ 1.36
PACRGL-220ENST00000508952 ANXA13P27216 316 aa23.54■■□□□ 1.36
PACRGL-220ENST00000508952 AP3M2P53677 418 aa23.54■■□□□ 1.36
PACRGL-220ENST00000508952 CACNA2D1P54289 1103 aa23.54■■□□□ 1.36
PACRGL-220ENST00000508952 CDH8P55286 799 aa23.54■■□□□ 1.36
PACRGL-220ENST00000508952 GAS6Q14393 721 aa23.54■■□□□ 1.36
PACRGL-220ENST00000508952 ZNF518BQ9C0D4 1074 aa23.54■■□□□ 1.36
PACRGL-220ENST00000508952 EBF3Q9H4W6 596 aa23.54■■□□□ 1.36
PACRGL-220ENST00000508952 VRTNQ9H8Y1 702 aa23.54■■□□□ 1.36
PACRGL-220ENST00000508952 HPS4Q9NQG7 708 aa23.54■■□□□ 1.36
PACRGL-220ENST00000508952 TMEM30AQ9NV96 361 aa23.54■■□□□ 1.36
PACRGL-220ENST00000508952 HELZP42694 1942 aaKnown RBP23.54■■□□□ 1.36
PACRGL-220ENST00000508952 TRAV19A0A0A6YYK7 116 aa23.53■■□□□ 1.36
PACRGL-220ENST00000508952 C2orf78A6NCI8 922 aa23.53■■□□□ 1.36
PACRGL-220ENST00000508952 F8VP50 259 aa23.53■■□□□ 1.36
PACRGL-220ENST00000508952 CLDN5O00501 218 aa23.53■■□□□ 1.36
PACRGL-220ENST00000508952 CALUO43852 315 aaPredicted RBP23.53■■□□□ 1.36
PACRGL-220ENST00000508952 KINO60870 393 aaKnown RBP23.53■■□□□ 1.36
PACRGL-220ENST00000508952 ZNF202O95125 648 aa23.53■■□□□ 1.36
PACRGL-220ENST00000508952 CKMP06732 381 aa23.53■■□□□ 1.36
PACRGL-220ENST00000508952 FAM163BP0C2L3 166 aa23.53■■□□□ 1.36
PACRGL-220ENST00000508952 LRRC32Q14392 662 aa23.53■■□□□ 1.36
PACRGL-220ENST00000508952 ZNF268Q14587 947 aaPredicted RBP23.53■■□□□ 1.36
PACRGL-220ENST00000508952 ZNF667Q5HYK9 610 aa23.53■■□□□ 1.36
PACRGL-220ENST00000508952 Q6ZS52 159 aa23.53■■□□□ 1.36
PACRGL-220ENST00000508952 DENND5BQ6ZUT9 1274 aa23.53■■□□□ 1.36
PACRGL-220ENST00000508952 B3GALNT2Q8NCR0 500 aa23.53■■□□□ 1.36
PACRGL-220ENST00000508952 IER2Q9BTL4 223 aa23.53■■□□□ 1.36
PACRGL-220ENST00000508952 ZSCAN32Q9NX65 697 aa23.53■■□□□ 1.36
PACRGL-220ENST00000508952 TRAF3IP3Q9Y228 551 aa23.53■■□□□ 1.36
PACRGL-220ENST00000508952 PCDHGA2Q9Y5H1 932 aa23.53■■□□□ 1.36
PACRGL-220ENST00000508952 OTOGLQ3ZCN5 2332 aa23.53■■□□□ 1.36
PACRGL-220ENST00000508952 OTOL1A6NHN0 477 aaPredicted RBP23.52■■□□□ 1.36
PACRGL-220ENST00000508952 TRIM66O15016 1216 aa23.52■■□□□ 1.36
PACRGL-220ENST00000508952 USP17L7P0C7H9 530 aa23.52■■□□□ 1.36
PACRGL-220ENST00000508952 ARSAP15289 507 aa23.52■■□□□ 1.36
PACRGL-220ENST00000508952 SATB1Q01826 763 aa23.52■■□□□ 1.36
PACRGL-220ENST00000508952 CC2D1AQ6P1N0 951 aaPredicted RBP23.52■■□□□ 1.36
PACRGL-220ENST00000508952 ARL14EPQ8N8R7 260 aaPredicted RBP23.52■■□□□ 1.36
PACRGL-220ENST00000508952 SUMF1Q8NBK3 374 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms