RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 CACTINQ8WUQ7 758 aaKnown RBP7.66□□□□□ -1.18
CLCN3-206ENST00000507875 PAGE5Q96GU1 130 aa7.66□□□□□ -1.18
CLCN3-206ENST00000507875 MMP19Q99542 508 aa7.66□□□□□ -1.18
CLCN3-206ENST00000507875 LRFN3Q9BTN0 628 aa7.66□□□□□ -1.18
CLCN3-206ENST00000507875 B3GNT5Q9BYG0 378 aa7.66□□□□□ -1.18
CLCN3-206ENST00000507875 SLC7A5P2Q9GIP4 190 aa7.66□□□□□ -1.18
CLCN3-206ENST00000507875 AGO4Q9HCK5 861 aaKnown RBP7.66□□□□□ -1.18
CLCN3-206ENST00000507875 TRMT13Q9NUP7 481 aaKnown RBP7.66□□□□□ -1.18
CLCN3-206ENST00000507875 KCND2Q9NZV8 630 aa7.66□□□□□ -1.18
CLCN3-206ENST00000507875 FBXL21Q9UKT6 434 aa7.66□□□□□ -1.18
CLCN3-206ENST00000507875 VAV3Q9UKW4 847 aa7.66□□□□□ -1.18
CLCN3-206ENST00000507875 MYH9P35579 1960 aaKnown RBP7.65□□□□□ -1.18
CLCN3-206ENST00000507875 PVALEFA0A1B0GWK0 134 aa7.65□□□□□ -1.18
CLCN3-206ENST00000507875 CCDC66A2RUB6 948 aa7.65□□□□□ -1.18
CLCN3-206ENST00000507875 LYPLA2O95372 231 aa7.65□□□□□ -1.18
CLCN3-206ENST00000507875 ITGA4P13612 1032 aa7.65□□□□□ -1.18
CLCN3-206ENST00000507875 ADH7P40394 386 aa7.65□□□□□ -1.18
CLCN3-206ENST00000507875 STT3AP46977 705 aa7.65□□□□□ -1.18
CLCN3-206ENST00000507875 CRHR2Q13324 411 aa7.65□□□□□ -1.18
CLCN3-206ENST00000507875 SEMA5AQ13591 1074 aa7.65□□□□□ -1.18
CLCN3-206ENST00000507875 TTLL4Q14679 1199 aa7.65□□□□□ -1.18
CLCN3-206ENST00000507875 KIF22Q14807 665 aa7.65□□□□□ -1.18
CLCN3-206ENST00000507875 IQCEQ6IPM2 695 aa7.65□□□□□ -1.18
CLCN3-206ENST00000507875 POMZP3Q6PJE2 187 aa7.65□□□□□ -1.18
CLCN3-206ENST00000507875 FOXR2Q6PJQ5 311 aa7.65□□□□□ -1.18
CLCN3-206ENST00000507875 OTOP1Q7RTM1 612 aa7.65□□□□□ -1.18
CLCN3-206ENST00000507875 C11orf74Q86VG3 221 aa7.65□□□□□ -1.18
CLCN3-206ENST00000507875 RASSF3Q86WH2 238 aa7.65□□□□□ -1.18
CLCN3-206ENST00000507875 HID1Q8IV36 788 aa7.65□□□□□ -1.18
CLCN3-206ENST00000507875 LRRC8AQ8IWT6 810 aa7.65□□□□□ -1.18
CLCN3-206ENST00000507875 RASSF8Q8NHQ8 419 aa7.65□□□□□ -1.18
CLCN3-206ENST00000507875 DHX58Q96C10 678 aa7.65□□□□□ -1.18
CLCN3-206ENST00000507875 RIPOR3Q96MK2 946 aa7.65□□□□□ -1.18
CLCN3-206ENST00000507875 NT5C1BQ96P26 610 aa7.65□□□□□ -1.18
CLCN3-206ENST00000507875 MMTAG2Q9BU76 263 aaKnown RBP7.65□□□□□ -1.18
CLCN3-206ENST00000507875 PCDHA5Q9Y5H7 936 aa7.65□□□□□ -1.18
CLCN3-206ENST00000507875 SLC15A5A6NIM6 579 aa7.64□□□□□ -1.19
CLCN3-206ENST00000507875 AQP7O14520 342 aa7.64□□□□□ -1.19
CLCN3-206ENST00000507875 FSCN2O14926 492 aa7.64□□□□□ -1.19
CLCN3-206ENST00000507875 CCT6AP40227 531 aaKnown RBP7.64□□□□□ -1.19
CLCN3-206ENST00000507875 MRPS9P82933 396 aaKnown RBP7.64□□□□□ -1.19
CLCN3-206ENST00000507875 SLMAPQ14BN4 828 aa7.64□□□□□ -1.19
CLCN3-206ENST00000507875 C8orf86Q6ZUL3 223 aa7.64□□□□□ -1.19
CLCN3-206ENST00000507875 ARL6IP6Q8N6S5 226 aa7.64□□□□□ -1.19
CLCN3-206ENST00000507875 RAD54LQ92698 747 aa7.64□□□□□ -1.19
CLCN3-206ENST00000507875 HPS3Q969F9 1004 aa7.64□□□□□ -1.19
CLCN3-206ENST00000507875 PTPN18Q99952 460 aa7.64□□□□□ -1.19
CLCN3-206ENST00000507875 TIPINQ9BVW5 301 aa7.64□□□□□ -1.19
CLCN3-206ENST00000507875 PRDM14Q9GZV8 571 aa7.64□□□□□ -1.19
CLCN3-206ENST00000507875 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.64□□□□□ -1.19
CLCN3-206ENST00000507875 KCNK4Q9NYG8 393 aa7.64□□□□□ -1.19
CLCN3-206ENST00000507875 CORO2BQ9UQ03 480 aa7.64□□□□□ -1.19
CLCN3-206ENST00000507875 TRIM17Q9Y577 477 aa7.64□□□□□ -1.19
CLCN3-206ENST00000507875 V9GYY5 206 aaPredicted RBP7.64□□□□□ -1.19
CLCN3-206ENST00000507875 MYH11P35749 1972 aa7.64□□□□□ -1.19
CLCN3-206ENST00000507875 GTPBP10A4D1E9 387 aaKnown RBP7.64□□□□□ -1.19
CLCN3-206ENST00000507875 TMEM110-MUSTN1A8MSY1 372 aa7.64□□□□□ -1.19
CLCN3-206ENST00000507875 DVL2O14641 736 aa7.64□□□□□ -1.19
CLCN3-206ENST00000507875 TMPRSS2O15393 492 aa7.64□□□□□ -1.19
CLCN3-206ENST00000507875 ULK1O75385 1050 aa7.64□□□□□ -1.19
CLCN3-206ENST00000507875 ZBED1O96006 694 aa7.64□□□□□ -1.19
CLCN3-206ENST00000507875 SCG5P05408 212 aa7.64□□□□□ -1.19
CLCN3-206ENST00000507875 HOXC6P09630 235 aa7.64□□□□□ -1.19
CLCN3-206ENST00000507875 STIP1P31948 543 aaKnown RBP7.64□□□□□ -1.19
CLCN3-206ENST00000507875 SESN3P58005 492 aa7.64□□□□□ -1.19
CLCN3-206ENST00000507875 ANKRD39Q53RE8 183 aa7.64□□□□□ -1.19
CLCN3-206ENST00000507875 ZNF468Q5VIY5 522 aaPredicted RBP7.64□□□□□ -1.19
CLCN3-206ENST00000507875 USP49Q70CQ1 688 aa7.64□□□□□ -1.19
CLCN3-206ENST00000507875 RTL10Q7L3V2 364 aa7.64□□□□□ -1.19
CLCN3-206ENST00000507875 TMC3Q7Z5M5 1100 aa7.64□□□□□ -1.19
CLCN3-206ENST00000507875 KIF18BQ86Y91 864 aa7.64□□□□□ -1.19
CLCN3-206ENST00000507875 LARP4BQ92615 738 aaKnown RBP7.64□□□□□ -1.19
CLCN3-206ENST00000507875 HSD3B7Q9H2F3 369 aa7.64□□□□□ -1.19
CLCN3-206ENST00000507875 KCNH7Q9NS40 1196 aa7.64□□□□□ -1.19
CLCN3-206ENST00000507875 UTP6Q9NYH9 597 aaKnown RBP7.64□□□□□ -1.19
CLCN3-206ENST00000507875 IMPACTQ9P2X3 320 aa7.64□□□□□ -1.19
CLCN3-206ENST00000507875 UQCRHLA0A096LP55 91 aa7.63□□□□□ -1.19
CLCN3-206ENST00000507875 KIF20AO95235 890 aa7.63□□□□□ -1.19
CLCN3-206ENST00000507875 UQCRHP07919 91 aa7.63□□□□□ -1.19
CLCN3-206ENST00000507875 POU2F2P09086 479 aa7.63□□□□□ -1.19
CLCN3-206ENST00000507875 ITGB5P18084 799 aa7.63□□□□□ -1.19
CLCN3-206ENST00000507875 PEX2P28328 305 aa7.63□□□□□ -1.19
CLCN3-206ENST00000507875 HOXC12P31275 282 aa7.63□□□□□ -1.19
CLCN3-206ENST00000507875 GSDMDP57764 484 aa7.63□□□□□ -1.19
CLCN3-206ENST00000507875 MYL5Q02045 173 aa7.63□□□□□ -1.19
CLCN3-206ENST00000507875 KARSQ15046 597 aaKnown RBP7.63□□□□□ -1.19
CLCN3-206ENST00000507875 TERF2Q15554 542 aa7.63□□□□□ -1.19
CLCN3-206ENST00000507875 PTPN14Q15678 1187 aa7.63□□□□□ -1.19
CLCN3-206ENST00000507875 NACC1Q96RE7 527 aa7.63□□□□□ -1.19
CLCN3-206ENST00000507875 VPS11Q9H270 941 aa7.63□□□□□ -1.19
CLCN3-206ENST00000507875 KRBA1A5PL33 1030 aa7.63□□□□□ -1.19
CLCN3-206ENST00000507875 DHX15O43143 795 aaKnown RBP7.63□□□□□ -1.19
CLCN3-206ENST00000507875 TLR2O60603 784 aa7.63□□□□□ -1.19
CLCN3-206ENST00000507875 CPP00450 1065 aa7.63□□□□□ -1.19
CLCN3-206ENST00000507875 IFNGR1P15260 489 aa7.63□□□□□ -1.19
CLCN3-206ENST00000507875 RGS19P49795 217 aa7.63□□□□□ -1.19
CLCN3-206ENST00000507875 NEDD9Q14511 834 aa7.63□□□□□ -1.19
CLCN3-206ENST00000507875 MBLAC2Q68D91 279 aa7.63□□□□□ -1.19
CLCN3-206ENST00000507875 MAMDC4Q6UXC1 1216 aa7.63□□□□□ -1.19
CLCN3-206ENST00000507875 MIER3Q7Z3K6 550 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms