RNA–Protein interactions for RNA: ENST00000505397.1

LIN54-204, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIN54, Length 2,742 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-204ENST00000505397 TFDP3Q5H9I0 405 aa17.8■□□□□ 0.44
LIN54-204ENST00000505397 GIMAP7Q8NHV1 300 aa17.8■□□□□ 0.44
LIN54-204ENST00000505397 AGAP11Q8TF27 550 aa17.8■□□□□ 0.44
LIN54-204ENST00000505397 MCEEQ96PE7 176 aa17.8■□□□□ 0.44
LIN54-204ENST00000505397 ZNF518BQ9C0D4 1074 aa17.8■□□□□ 0.44
LIN54-204ENST00000505397 SMG5Q9UPR3 1016 aaKnown RBP17.8■□□□□ 0.44
LIN54-204ENST00000505397 SHOC2Q9UQ13 582 aa17.8■□□□□ 0.44
LIN54-204ENST00000505397 DOCK3Q8IZD9 2030 aa17.8■□□□□ 0.44
LIN54-204ENST00000505397 NDC80O14777 642 aa17.8■□□□□ 0.44
LIN54-204ENST00000505397 PIGHQ14442 188 aaPredicted RBP17.8■□□□□ 0.44
LIN54-204ENST00000505397 BRSK2Q8IWQ3 736 aa17.8■□□□□ 0.44
LIN54-204ENST00000505397 WDTC1Q8N5D0 677 aa17.8■□□□□ 0.44
LIN54-204ENST00000505397 GPATCH11Q8N954 259 aa17.8■□□□□ 0.44
LIN54-204ENST00000505397 OR6J1Q8NGC5 347 aa17.8■□□□□ 0.44
LIN54-204ENST00000505397 NPLOC4Q8TAT6 608 aa17.8■□□□□ 0.44
LIN54-204ENST00000505397 SLC35B2Q8TB61 432 aa17.8■□□□□ 0.44
LIN54-204ENST00000505397 TBC1D31Q96DN5 1066 aa17.8■□□□□ 0.44
LIN54-204ENST00000505397 TRABDQ9H4I3 376 aa17.8■□□□□ 0.44
LIN54-204ENST00000505397 DDX56Q9NY93 547 aaKnown RBP17.8■□□□□ 0.44
LIN54-204ENST00000505397 INO80B-WBP1J3KQ70 363 aa17.79■□□□□ 0.44
LIN54-204ENST00000505397 UNC5CO95185 931 aa17.79■□□□□ 0.44
LIN54-204ENST00000505397 C22orf31O95567 290 aa17.79■□□□□ 0.44
LIN54-204ENST00000505397 TAP1Q03518 808 aa17.79■□□□□ 0.44
LIN54-204ENST00000505397 PKN2Q16513 984 aaKnown RBP17.79■□□□□ 0.44
LIN54-204ENST00000505397 WDR49Q8IV35 697 aa17.79■□□□□ 0.44
LIN54-204ENST00000505397 PRCCQ92733 491 aaPredicted RBP17.79■□□□□ 0.44
LIN54-204ENST00000505397 INO80BQ9C086 356 aaPredicted RBP17.79■□□□□ 0.44
LIN54-204ENST00000505397 PCDH9Q9HC56 1237 aa17.79■□□□□ 0.44
LIN54-204ENST00000505397 SLC24A2Q9UI40 661 aa17.79■□□□□ 0.44
LIN54-204ENST00000505397 GRID1Q9ULK0 1009 aa17.79■□□□□ 0.44
LIN54-204ENST00000505397 FARP1Q9Y4F1 1045 aaPredicted RBP17.79■□□□□ 0.44
LIN54-204ENST00000505397 C3orf70A6NLC5 250 aaPredicted RBP17.79■□□□□ 0.44
LIN54-204ENST00000505397 SMPD1P17405 629 aa17.79■□□□□ 0.44
LIN54-204ENST00000505397 YARSP54577 528 aaKnown RBP17.79■□□□□ 0.44
LIN54-204ENST00000505397 PDK4Q16654 411 aa17.79■□□□□ 0.44
LIN54-204ENST00000505397 ACCSLQ4AC99 568 aa17.79■□□□□ 0.44
LIN54-204ENST00000505397 SMYD5Q6GMV2 418 aa17.79■□□□□ 0.44
LIN54-204ENST00000505397 DNAJC24Q6P3W2 148 aa17.79■□□□□ 0.44
LIN54-204ENST00000505397 ZBTB33Q86T24 672 aa17.79■□□□□ 0.44
LIN54-204ENST00000505397 KIF2BQ8N4N8 673 aa17.79■□□□□ 0.44
LIN54-204ENST00000505397 PHACTR1Q9C0D0 580 aa17.79■□□□□ 0.44
LIN54-204ENST00000505397 PCDHGC3Q9UN70 934 aa17.79■□□□□ 0.44
LIN54-204ENST00000505397 COL1A2P08123 1366 aa17.79■□□□□ 0.44
LIN54-204ENST00000505397 TYROBPO43914 113 aa17.78■□□□□ 0.44
LIN54-204ENST00000505397 SPAG7O75391 227 aa17.78■□□□□ 0.44
LIN54-204ENST00000505397 GJB1P08034 283 aa17.78■□□□□ 0.44
LIN54-204ENST00000505397 SPARCL1Q14515 664 aa17.78■□□□□ 0.44
LIN54-204ENST00000505397 SEZ6Q53EL9 994 aa17.78■□□□□ 0.44
LIN54-204ENST00000505397 IQSEC1Q6DN90 963 aa17.78■□□□□ 0.44
LIN54-204ENST00000505397 RGMBQ6NW40 437 aa17.78■□□□□ 0.44
LIN54-204ENST00000505397 TMEM35BQ8NCS4 154 aa17.78■□□□□ 0.44
LIN54-204ENST00000505397 STAMBPL1Q96FJ0 436 aa17.78■□□□□ 0.44
LIN54-204ENST00000505397 ZNF668Q96K58 619 aaPredicted RBP17.78■□□□□ 0.44
LIN54-204ENST00000505397 ACO2Q99798 780 aaKnown RBP17.78■□□□□ 0.44
LIN54-204ENST00000505397 IMPG2Q9BZV3 1241 aa17.78■□□□□ 0.44
LIN54-204ENST00000505397 FETUBQ9UGM5 382 aa17.78■□□□□ 0.44
LIN54-204ENST00000505397 EFR3BQ9Y2G0 817 aa17.78■□□□□ 0.44
LIN54-204ENST00000505397 ZSWIM8A7E2V4 1837 aa17.78■□□□□ 0.44
LIN54-204ENST00000505397 DCAF8L1A6NGE4 600 aa17.78■□□□□ 0.44
LIN54-204ENST00000505397 H3BRB1 525 aa17.78■□□□□ 0.44
LIN54-204ENST00000505397 EIF4BP23588 611 aaKnown RBP17.78■□□□□ 0.44
LIN54-204ENST00000505397 MSH2P43246 934 aa17.78■□□□□ 0.44
LIN54-204ENST00000505397 FAM47EQ6ZV65 393 aa17.78■□□□□ 0.44
LIN54-204ENST00000505397 POLNQ7Z5Q5 900 aa17.78■□□□□ 0.44
LIN54-204ENST00000505397 ZBTB10Q96DT7 871 aa17.78■□□□□ 0.44
LIN54-204ENST00000505397 TUT1Q9H6E5 874 aaKnown RBP17.78■□□□□ 0.44
LIN54-204ENST00000505397 KIF9Q9HAQ2 790 aa17.78■□□□□ 0.44
LIN54-204ENST00000505397 SSU72Q9NP77 194 aaKnown RBP17.78■□□□□ 0.44
LIN54-204ENST00000505397 PHTF1Q9UMS5 762 aa17.78■□□□□ 0.44
LIN54-204ENST00000505397 POC1B-GALNT4F8VUJ3 575 aa17.78■□□□□ 0.44
LIN54-204ENST00000505397 MMP3P08254 477 aa17.78■□□□□ 0.44
LIN54-204ENST00000505397 CCND1P24385 295 aa17.78■□□□□ 0.44
LIN54-204ENST00000505397 PHKA2P46019 1235 aa17.78■□□□□ 0.44
LIN54-204ENST00000505397 MAP2K5Q13163 448 aa17.78■□□□□ 0.44
LIN54-204ENST00000505397 ZC3H12AQ5D1E8 599 aaKnown RBP17.78■□□□□ 0.44
LIN54-204ENST00000505397 EFHC2Q5JST6 749 aa17.78■□□□□ 0.44
LIN54-204ENST00000505397 CENPUQ71F23 418 aa17.78■□□□□ 0.44
LIN54-204ENST00000505397 ZBED8Q8IZ13 594 aa17.78■□□□□ 0.44
LIN54-204ENST00000505397 TRIM33Q9UPN9 1127 aa17.78■□□□□ 0.44
LIN54-204ENST00000505397 AKT3Q9Y243 479 aa17.78■□□□□ 0.44
LIN54-204ENST00000505397 L3MBTL1Q9Y468 752 aa17.78■□□□□ 0.44
LIN54-204ENST00000505397 TTLL13PA6NNM8 815 aa17.77■□□□□ 0.44
LIN54-204ENST00000505397 ACKR2O00590 384 aa17.77■□□□□ 0.44
LIN54-204ENST00000505397 BRD2P25440 801 aaKnown RBP17.77■□□□□ 0.44
LIN54-204ENST00000505397 RPA3P35244 121 aaPredicted RBP17.77■□□□□ 0.44
LIN54-204ENST00000505397 TNFSF9P41273 254 aa17.77■□□□□ 0.44
LIN54-204ENST00000505397 GPX6P59796 221 aa17.77■□□□□ 0.44
LIN54-204ENST00000505397 PDE4CQ08493 712 aa17.77■□□□□ 0.44
LIN54-204ENST00000505397 DNAJC3Q13217 504 aa17.77■□□□□ 0.44
LIN54-204ENST00000505397 DGKDQ16760 1214 aa17.77■□□□□ 0.44
LIN54-204ENST00000505397 DCUN1D2Q6PH85 259 aa17.77■□□□□ 0.44
LIN54-204ENST00000505397 SAPCD2Q86UD0 394 aa17.77■□□□□ 0.44
LIN54-204ENST00000505397 SMC6Q96SB8 1091 aa17.77■□□□□ 0.44
LIN54-204ENST00000505397 C16orf70Q9BSU1 422 aa17.77■□□□□ 0.44
LIN54-204ENST00000505397 TMEM121Q9BTD3 319 aa17.77■□□□□ 0.44
LIN54-204ENST00000505397 CISHQ9NSE2 258 aa17.77■□□□□ 0.44
LIN54-204ENST00000505397 OGTO15294 1046 aa17.77■□□□□ 0.43
LIN54-204ENST00000505397 EDF1O60869 148 aaKnown RBP17.77■□□□□ 0.43
LIN54-204ENST00000505397 TNFAIP2Q03169 654 aa17.77■□□□□ 0.43
LIN54-204ENST00000505397 PCGF5Q86SE9 256 aa17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms