RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 KIAA1257Q9ULG3 409 aa14.38□□□□□ -0.11
CPNE1-227ENST00000498056 SLC27A5Q9Y2P5 690 aa14.38□□□□□ -0.11
CPNE1-227ENST00000498056 YIPF1Q9Y548 306 aa14.38□□□□□ -0.11
CPNE1-227ENST00000498056 HCFC2Q9Y5Z7 792 aa14.38□□□□□ -0.11
CPNE1-227ENST00000498056 SEC24AO95486 1093 aa14.37□□□□□ -0.11
CPNE1-227ENST00000498056 SERPING1P05155 500 aa14.37□□□□□ -0.11
CPNE1-227ENST00000498056 CFHP08603 1231 aa14.37□□□□□ -0.11
CPNE1-227ENST00000498056 ATF2P15336 505 aa14.37□□□□□ -0.11
CPNE1-227ENST00000498056 NPR3P17342 541 aa14.37□□□□□ -0.11
CPNE1-227ENST00000498056 CYP2F1P24903 491 aa14.37□□□□□ -0.11
CPNE1-227ENST00000498056 ANXA13P27216 316 aa14.37□□□□□ -0.11
CPNE1-227ENST00000498056 GTF2F1P35269 517 aaKnown RBP eCLIP14.37□□□□□ -0.11
CPNE1-227ENST00000498056 GPR15P49685 360 aa14.37□□□□□ -0.11
CPNE1-227ENST00000498056 CACNA2D1P54289 1103 aa14.37□□□□□ -0.11
CPNE1-227ENST00000498056 GSDMDP57764 484 aa14.37□□□□□ -0.11
CPNE1-227ENST00000498056 CDR2Q01850 454 aa14.37□□□□□ -0.11
CPNE1-227ENST00000498056 BST2Q10589 180 aaKnown RBP14.37□□□□□ -0.11
CPNE1-227ENST00000498056 DUSP4Q13115 394 aa14.37□□□□□ -0.11
CPNE1-227ENST00000498056 SMYD5Q6GMV2 418 aa14.37□□□□□ -0.11
CPNE1-227ENST00000498056 DENND1BQ6P3S1 775 aa14.37□□□□□ -0.11
CPNE1-227ENST00000498056 TTC30AQ86WT1 665 aa14.37□□□□□ -0.11
CPNE1-227ENST00000498056 KREMEN2Q8NCW0 462 aa14.37□□□□□ -0.11
CPNE1-227ENST00000498056 STKLD1Q8NE28 680 aa14.37□□□□□ -0.11
CPNE1-227ENST00000498056 UBA3Q8TBC4 463 aa14.37□□□□□ -0.11
CPNE1-227ENST00000498056 ZNF606Q8WXB4 792 aa14.37□□□□□ -0.11
CPNE1-227ENST00000498056 SYN2Q92777 582 aaPredicted RBP14.37□□□□□ -0.11
CPNE1-227ENST00000498056 SECISBP2LQ93073 1101 aaKnown RBP14.37□□□□□ -0.11
CPNE1-227ENST00000498056 DEF6Q9H4E7 631 aa14.37□□□□□ -0.11
CPNE1-227ENST00000498056 ABCB6Q9NP58 842 aa14.37□□□□□ -0.11
CPNE1-227ENST00000498056 DMAP1Q9NPF5 467 aaPredicted RBP14.37□□□□□ -0.11
CPNE1-227ENST00000498056 LMCD1Q9NZU5 365 aa14.37□□□□□ -0.11
CPNE1-227ENST00000498056 INSL5Q9Y5Q6 135 aa14.37□□□□□ -0.11
CPNE1-227ENST00000498056 MTCH2Q9Y6C9 303 aa14.37□□□□□ -0.11
CPNE1-227ENST00000498056 BRWD1Q9NSI6 2320 aa14.37□□□□□ -0.11
CPNE1-227ENST00000498056 NUP210Q8TEM1 1887 aaPredicted RBP14.36□□□□□ -0.11
CPNE1-227ENST00000498056 TRIM66O15016 1216 aa14.36□□□□□ -0.11
CPNE1-227ENST00000498056 ABLIM3O94929 683 aa14.36□□□□□ -0.11
CPNE1-227ENST00000498056 C8AP07357 584 aa14.36□□□□□ -0.11
CPNE1-227ENST00000498056 PLEKP08567 350 aaPredicted RBP14.36□□□□□ -0.11
CPNE1-227ENST00000498056 SETSIPP0DME0 302 aa14.36□□□□□ -0.11
CPNE1-227ENST00000498056 SRGAP2BP0DMP2 458 aa14.36□□□□□ -0.11
CPNE1-227ENST00000498056 FOSL2P15408 326 aa14.36□□□□□ -0.11
CPNE1-227ENST00000498056 GRIK1P39086 918 aa14.36□□□□□ -0.11
CPNE1-227ENST00000498056 PRKCIP41743 596 aa14.36□□□□□ -0.11
CPNE1-227ENST00000498056 MAP3K7CLP57077 242 aa14.36□□□□□ -0.11
CPNE1-227ENST00000498056 SLC8A3P57103 927 aa14.36□□□□□ -0.11
CPNE1-227ENST00000498056 RBM10P98175 930 aaKnown RBP14.36□□□□□ -0.11
CPNE1-227ENST00000498056 FMO1Q01740 532 aa14.36□□□□□ -0.11
CPNE1-227ENST00000498056 HYAL1Q12794 435 aa14.36□□□□□ -0.11
CPNE1-227ENST00000498056 ARID5BQ14865 1188 aa14.36□□□□□ -0.11
CPNE1-227ENST00000498056 GPR153Q6NV75 609 aa14.36□□□□□ -0.11
CPNE1-227ENST00000498056 ELMSAN1Q6PJG2 1045 aa14.36□□□□□ -0.11
CPNE1-227ENST00000498056 LCLAT1Q6UWP7 414 aa14.36□□□□□ -0.11
CPNE1-227ENST00000498056 CLEC20AQ6ZU45 233 aa14.36□□□□□ -0.11
CPNE1-227ENST00000498056 PAQR9Q6ZVX9 377 aa14.36□□□□□ -0.11
CPNE1-227ENST00000498056 IRF2BP2Q7Z5L9 587 aa14.36□□□□□ -0.11
CPNE1-227ENST00000498056 VPS36Q86VN1 386 aa14.36□□□□□ -0.11
CPNE1-227ENST00000498056 ZNF677Q86XU0 584 aa14.36□□□□□ -0.11
CPNE1-227ENST00000498056 DEFB123Q8N688 67 aa14.36□□□□□ -0.11
CPNE1-227ENST00000498056 C1orf131Q8NDD1 294 aaKnown RBP14.36□□□□□ -0.11
CPNE1-227ENST00000498056 DDX1Q92499 740 aaKnown RBP14.36□□□□□ -0.11
CPNE1-227ENST00000498056 CDCA3Q99618 268 aaPredicted RBP14.36□□□□□ -0.11
CPNE1-227ENST00000498056 AGPAT1Q99943 283 aa14.36□□□□□ -0.11
CPNE1-227ENST00000498056 TMEM30AQ9NV96 361 aa14.36□□□□□ -0.11
CPNE1-227ENST00000498056 REV3LO60673 3130 aa14.35□□□□□ -0.11
CPNE1-227ENST00000498056 F8VP50 259 aa14.35□□□□□ -0.11
CPNE1-227ENST00000498056 LRG1P02750 347 aa14.35□□□□□ -0.11
CPNE1-227ENST00000498056 HAPLN1P10915 354 aaPredicted RBP14.35□□□□□ -0.11
CPNE1-227ENST00000498056 ATF6P18850 670 aa14.35□□□□□ -0.11
CPNE1-227ENST00000498056 HNRNPH3P31942 346 aaKnown RBP14.35□□□□□ -0.11
CPNE1-227ENST00000498056 MAGEA11P43364 429 aa14.35□□□□□ -0.11
CPNE1-227ENST00000498056 PDE4CQ08493 712 aa14.35□□□□□ -0.11
CPNE1-227ENST00000498056 CCDC173Q0VFZ6 552 aa14.35□□□□□ -0.11
CPNE1-227ENST00000498056 TWF1Q12792 350 aa14.35□□□□□ -0.11
CPNE1-227ENST00000498056 IFRD2Q12894 506 aaPredicted RBP14.35□□□□□ -0.11
CPNE1-227ENST00000498056 VEPH1Q14D04 833 aa14.35□□□□□ -0.11
CPNE1-227ENST00000498056 CNGA2Q16280 664 aa14.35□□□□□ -0.11
CPNE1-227ENST00000498056 DDR2Q16832 855 aa14.35□□□□□ -0.11
CPNE1-227ENST00000498056 PPM1LQ5SGD2 360 aa14.35□□□□□ -0.11
CPNE1-227ENST00000498056 SDHAF4Q5VUM1 108 aa14.35□□□□□ -0.11
CPNE1-227ENST00000498056 NAA35Q5VZE5 725 aa14.35□□□□□ -0.11
CPNE1-227ENST00000498056 HGSNATQ68CP4 663 aa14.35□□□□□ -0.11
CPNE1-227ENST00000498056 VSTM1Q6UX27 236 aa14.35□□□□□ -0.11
CPNE1-227ENST00000498056 EP400NLQ6ZTU2 488 aa14.35□□□□□ -0.11
CPNE1-227ENST00000498056 CCDC149Q6ZUS6 474 aa14.35□□□□□ -0.11
CPNE1-227ENST00000498056 CCDC186Q7Z3E2 898 aa14.35□□□□□ -0.11
CPNE1-227ENST00000498056 ZNF571Q7Z3V5 609 aaPredicted RBP14.35□□□□□ -0.11
CPNE1-227ENST00000498056 ANKRD52Q8NB46 1076 aa14.35□□□□□ -0.11
CPNE1-227ENST00000498056 GPR152Q8TDT2 470 aa14.35□□□□□ -0.11
CPNE1-227ENST00000498056 SLC22A17Q8WUG5 538 aa14.35□□□□□ -0.11
CPNE1-227ENST00000498056 GUCD1Q96NT3 240 aa14.35□□□□□ -0.11
CPNE1-227ENST00000498056 PANX2Q96RD6 677 aa14.35□□□□□ -0.11
CPNE1-227ENST00000498056 CDX2Q99626 313 aaPredicted RBP14.35□□□□□ -0.11
CPNE1-227ENST00000498056 SMOQ99835 787 aa14.35□□□□□ -0.11
CPNE1-227ENST00000498056 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.35□□□□□ -0.11
CPNE1-227ENST00000498056 ARHGAP20Q9P2F6 1191 aa14.35□□□□□ -0.11
CPNE1-227ENST00000498056 PCDHGC3Q9UN70 934 aa14.35□□□□□ -0.11
CPNE1-227ENST00000498056 NOTCH4Q99466 2003 aa14.35□□□□□ -0.11
CPNE1-227ENST00000498056 TULP2O00295 520 aa14.34□□□□□ -0.11
CPNE1-227ENST00000498056 LINC01565O15544 149 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms