RNA–Protein interactions for RNA: ENST00000497993.5

TMEM39A-212, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-212ENST00000497993 TAF12Q16514 161 aa6.52□□□□□ -1.37
TMEM39A-212ENST00000497993 NKPD1Q17RQ9 610 aa6.52□□□□□ -1.37
TMEM39A-212ENST00000497993 KIZQ2M2Z5 673 aa6.52□□□□□ -1.37
TMEM39A-212ENST00000497993 SPECC1Q5M775 1068 aa6.52□□□□□ -1.37
TMEM39A-212ENST00000497993 PRAMEF19Q5SWL8 479 aa6.52□□□□□ -1.37
TMEM39A-212ENST00000497993 SPATA1Q5VX52 437 aa6.52□□□□□ -1.37
TMEM39A-212ENST00000497993 DENND5AQ6IQ26 1287 aa6.52□□□□□ -1.37
TMEM39A-212ENST00000497993 SLC39A5Q6ZMH5 540 aa6.52□□□□□ -1.37
TMEM39A-212ENST00000497993 TMTC3Q6ZXV5 915 aa6.52□□□□□ -1.37
TMEM39A-212ENST00000497993 USP45Q70EL2 814 aa6.52□□□□□ -1.37
TMEM39A-212ENST00000497993 PDZD4Q76G19 769 aaPredicted RBP6.52□□□□□ -1.37
TMEM39A-212ENST00000497993 OVCH1Q7RTY7 1134 aa6.52□□□□□ -1.37
TMEM39A-212ENST00000497993 SPACA3Q8IXA5 215 aa6.52□□□□□ -1.37
TMEM39A-212ENST00000497993 ZNF610Q8N9Z0 462 aa6.52□□□□□ -1.37
TMEM39A-212ENST00000497993 PCSK9Q8NBP7 692 aaKnown RBP6.52□□□□□ -1.37
TMEM39A-212ENST00000497993 KREMEN2Q8NCW0 462 aa6.52□□□□□ -1.37
TMEM39A-212ENST00000497993 LRTOMTQ8WZ04 291 aa6.52□□□□□ -1.37
TMEM39A-212ENST00000497993 FBXW5Q969U6 566 aa6.52□□□□□ -1.37
TMEM39A-212ENST00000497993 FERMT2Q96AC1 680 aa6.52□□□□□ -1.37
TMEM39A-212ENST00000497993 TBC1D20Q96BZ9 403 aa6.52□□□□□ -1.37
TMEM39A-212ENST00000497993 HRASLS5Q96KN8 279 aa6.52□□□□□ -1.37
TMEM39A-212ENST00000497993 UBXN10Q96LJ8 280 aa6.52□□□□□ -1.37
TMEM39A-212ENST00000497993 KREMEN1Q96MU8 473 aa6.52□□□□□ -1.37
TMEM39A-212ENST00000497993 NEK1Q96PY6 1258 aa6.52□□□□□ -1.37
TMEM39A-212ENST00000497993 TM6SF1Q9BZW5 370 aa6.52□□□□□ -1.37
TMEM39A-212ENST00000497993 ZDHHC5Q9C0B5 715 aa6.52□□□□□ -1.37
TMEM39A-212ENST00000497993 DMRT3Q9NQL9 472 aa6.52□□□□□ -1.37
TMEM39A-212ENST00000497993 BLOC1S4Q9NUP1 217 aa6.52□□□□□ -1.37
TMEM39A-212ENST00000497993 DNAJC28Q9NX36 388 aa6.52□□□□□ -1.37
TMEM39A-212ENST00000497993 COL20A1Q9P218 1284 aa6.52□□□□□ -1.37
TMEM39A-212ENST00000497993 CDC23Q9UJX2 597 aa6.52□□□□□ -1.37
TMEM39A-212ENST00000497993 KCNH3Q9ULD8 1083 aa6.52□□□□□ -1.37
TMEM39A-212ENST00000497993 CRYL1Q9Y2S2 319 aa6.52□□□□□ -1.37
TMEM39A-212ENST00000497993 TMEM98Q9Y2Y6 226 aa6.52□□□□□ -1.37
TMEM39A-212ENST00000497993 SPO11Q9Y5K1 396 aa6.52□□□□□ -1.37
TMEM39A-212ENST00000497993 NPFFR2Q9Y5X5 522 aa6.52□□□□□ -1.37
TMEM39A-212ENST00000497993 GPR45Q9Y5Y3 372 aa6.52□□□□□ -1.37
TMEM39A-212ENST00000497993 CAPN6Q9Y6Q1 641 aa6.52□□□□□ -1.37
TMEM39A-212ENST00000497993 ARID2Q68CP9 1835 aa6.52□□□□□ -1.37
TMEM39A-212ENST00000497993 RALGAPA2Q2PPJ7 1873 aa6.51□□□□□ -1.37
TMEM39A-212ENST00000497993 TTC28Q96AY4 2481 aa6.51□□□□□ -1.37
TMEM39A-212ENST00000497993 CAPN8A6NHC0 703 aa6.51□□□□□ -1.37
TMEM39A-212ENST00000497993 RRN3P2A6NIE6 340 aa6.51□□□□□ -1.37
TMEM39A-212ENST00000497993 RHPN2P1A8MT19 583 aa6.51□□□□□ -1.37
TMEM39A-212ENST00000497993 PRR33A8MZF0 331 aa6.51□□□□□ -1.37
TMEM39A-212ENST00000497993 FOXN3O00409 490 aaPredicted RBP6.51□□□□□ -1.37
TMEM39A-212ENST00000497993 WNT9AO14904 365 aa6.51□□□□□ -1.37
TMEM39A-212ENST00000497993 MEFVO15553 781 aaPredicted RBP6.51□□□□□ -1.37
TMEM39A-212ENST00000497993 TMCC2O75069 709 aa6.51□□□□□ -1.37
TMEM39A-212ENST00000497993 TGFB3P10600 412 aa6.51□□□□□ -1.37
TMEM39A-212ENST00000497993 AGXTP21549 392 aa6.51□□□□□ -1.37
TMEM39A-212ENST00000497993 ICAM3P32942 547 aa6.51□□□□□ -1.37
TMEM39A-212ENST00000497993 PIK3CBP42338 1070 aa6.51□□□□□ -1.37
TMEM39A-212ENST00000497993 ACLYP53396 1101 aa6.51□□□□□ -1.37
TMEM39A-212ENST00000497993 TESK1Q15569 626 aa6.51□□□□□ -1.37
TMEM39A-212ENST00000497993 LRIT3Q3SXY7 679 aa6.51□□□□□ -1.37
TMEM39A-212ENST00000497993 ANO6Q4KMQ2 910 aa6.51□□□□□ -1.37
TMEM39A-212ENST00000497993 HABP4Q5JVS0 413 aaKnown RBP6.51□□□□□ -1.37
TMEM39A-212ENST00000497993 FKBP15Q5T1M5 1219 aa6.51□□□□□ -1.37
TMEM39A-212ENST00000497993 FRMD7Q6ZUT3 714 aa6.51□□□□□ -1.37
TMEM39A-212ENST00000497993 TLK2Q86UE8 772 aa6.51□□□□□ -1.37
TMEM39A-212ENST00000497993 SESTD1Q86VW0 696 aa6.51□□□□□ -1.37
TMEM39A-212ENST00000497993 CMIPQ8IY22 773 aa6.51□□□□□ -1.37
TMEM39A-212ENST00000497993 Q8N3U1 123 aa6.51□□□□□ -1.37
TMEM39A-212ENST00000497993 FAM26EQ8N5C1 309 aa6.51□□□□□ -1.37
TMEM39A-212ENST00000497993 CTCFLQ8NI51 663 aaPredicted RBP6.51□□□□□ -1.37
TMEM39A-212ENST00000497993 SCFD2Q8WU76 684 aa6.51□□□□□ -1.37
TMEM39A-212ENST00000497993 ASB11Q8WXH4 323 aa6.51□□□□□ -1.37
TMEM39A-212ENST00000497993 VWCEQ96DN2 955 aa6.51□□□□□ -1.37
TMEM39A-212ENST00000497993 INPP4AQ96PE3 977 aaPredicted RBP6.51□□□□□ -1.37
TMEM39A-212ENST00000497993 PDCD2LQ9BRP1 358 aa6.51□□□□□ -1.37
TMEM39A-212ENST00000497993 BOCQ9BWV1 1114 aa6.51□□□□□ -1.37
TMEM39A-212ENST00000497993 B3GNT5Q9BYG0 378 aa6.51□□□□□ -1.37
TMEM39A-212ENST00000497993 BTBD1Q9H0C5 482 aa6.51□□□□□ -1.37
TMEM39A-212ENST00000497993 CPVLQ9H3G5 476 aa6.51□□□□□ -1.37
TMEM39A-212ENST00000497993 ALG13Q9NP73 1137 aaKnown RBP6.51□□□□□ -1.37
TMEM39A-212ENST00000497993 STARD7Q9NQZ5 370 aa6.51□□□□□ -1.37
TMEM39A-212ENST00000497993 PXMP2Q9NR77 195 aa6.51□□□□□ -1.37
TMEM39A-212ENST00000497993 RBM28Q9NW13 759 aaKnown RBP6.51□□□□□ -1.37
TMEM39A-212ENST00000497993 TBX21Q9UL17 535 aa6.51□□□□□ -1.37
TMEM39A-212ENST00000497993 SLC5A6Q9Y289 635 aa6.51□□□□□ -1.37
TMEM39A-212ENST00000497993 PCDHA11Q9Y5I1 949 aa6.51□□□□□ -1.37
TMEM39A-212ENST00000497993 SNX14Q9Y5W7 946 aa6.51□□□□□ -1.37
TMEM39A-212ENST00000497993 COL4A6Q14031 1691 aa6.51□□□□□ -1.37
TMEM39A-212ENST00000497993 ATG2AQ2TAZ0 1938 aa6.5□□□□□ -1.37
TMEM39A-212ENST00000497993 CHD7Q9P2D1 2997 aa6.5□□□□□ -1.37
TMEM39A-212ENST00000497993 CHD9Q3L8U1 2897 aa6.5□□□□□ -1.37
TMEM39A-212ENST00000497993 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.5□□□□□ -1.37
TMEM39A-212ENST00000497993 ESYT2A0FGR8 921 aa6.5□□□□□ -1.37
TMEM39A-212ENST00000497993 MYADML2A6NDP7 307 aa6.5□□□□□ -1.37
TMEM39A-212ENST00000497993 MEIS2O14770 477 aa6.5□□□□□ -1.37
TMEM39A-212ENST00000497993 ADAMTS3O15072 1205 aa6.5□□□□□ -1.37
TMEM39A-212ENST00000497993 KDM1AO60341 852 aa6.5□□□□□ -1.37
TMEM39A-212ENST00000497993 PGK1P00558 417 aa6.5□□□□□ -1.37
TMEM39A-212ENST00000497993 CD4P01730 458 aa6.5□□□□□ -1.37
TMEM39A-212ENST00000497993 RPL17P18621 184 aaKnown RBP6.5□□□□□ -1.37
TMEM39A-212ENST00000497993 PDCP20941 246 aa6.5□□□□□ -1.37
TMEM39A-212ENST00000497993 RPS6KB1P23443 525 aa6.5□□□□□ -1.37
TMEM39A-212ENST00000497993 HOXC8P31273 242 aa6.5□□□□□ -1.37
TMEM39A-212ENST00000497993 ELF1P32519 619 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms